Ornithorhynchus anatinus (platypus): 100077192
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Entry
100077192 CDS
T01045
Symbol
CDH23
Name
(RefSeq) cadherin-23 isoform X1
KO
K06813
cadherin 23
Organism
oaa
Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oaa03037
]
100077192 (CDH23)
04515 Cell adhesion molecules [BR:
oaa04515
]
100077192 (CDH23)
Cilium and associated proteins [BR:
oaa03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100077192 (CDH23)
Cell adhesion molecules [BR:
oaa04515
]
Cadherins
Major cadherins
100077192 (CDH23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Cadherin_pro
Sde0182_C
TFIIB_C_1
Motif
Other DBs
NCBI-GeneID:
100077192
NCBI-ProteinID:
XP_039767444
Ensembl:
ENSOANG00000041676
LinkDB
All DBs
Position
3:complement(85474327..85856751)
Genome browser
AA seq
1871 aa
AA seq
DB search
MRSSVRVIIYVEDVNDEIPVFTQQQYSRLGLRETAGIGTSVTVVRATDRDMGNAGLVSYR
ILSGSEGKFEIDESTGLITTIDYLDYETKTSYLMNISATDQAPPNHRGFCSVYISLLNEL
DEAVQFSNSSYEAAIPENLAWGSEVLRVQAHSIDNLNQITYKFDPNTNAQARALFKIDGV
TGVITVQGPVDREKGDFHVLTVVADDGGPKVDSTVKVYITVLDENDNSPQFDVTSDSAVS
VPEDIALGQRVALVQARDPDAGSNGQVIFSLASGNIGRVFEILTTNGTYGEVFVVKALDR
ESLDRYILKIQASDCGSPPRRKDHILRVTILDVNDNPPVIESPFGYNVTVNENVGGGTAV
VQVRASDRDIGLNSLLSYYITRGNEDMTFRIDRVTGEIATRPSPPDRERQSFYHLVVTVE
DEGTPALSATTPVYVTVLDENDNAPVFQQQHYEVSLDEGPDTLNASLITVRALDWDEGPN
GSVIYAIIQGNIINTFHIDSATGLISTMKELDYEISHGRYTLLVTATDQCPVLSHRLTST
ATVLVNLNDINDNRPTFPQAYEGPFDITEGQPGPRVWTFLAVDGDSGPNGQVEYSIVGGD
PLGEFVISPVEGELRVRKDVELDRENIAFYNLTICARDRGTPALSSTILVGVRVLDINDN
DPVLLNLPLNVSISENSPVSSFVAHIHASDADSGRNALLTFNLTAGNRDRAFLINATTGV
VSVNRPLDRERIPEYKLTVSVKDNPENPRIARRDFDLLVVLIADENDNHPLFTQDSYEAE
IMENSPAGSVLVKSPLNRELVATYEVTISVLDGASDLPERAVSVPNAKLTVNILDVNDNT
PQFRPFGITYFMERVLEGATPGTTLISVAAVDPDKGANGQITYTLLNLVPPGYAQLEDDS
TGKVIANRTVDYEEVQWLNFTVRASDNGSPPRAAEIPVYLEIVDVNDNNPVFGQAAYQIP
VLEDVPLGTVLLTVTATDADSGPFALIQYSLGDGEGKFGIDPSTGDIFVLSALDREKKDH
YILTAVARDNPGDVSSNRRENSVQVVITVLDVNDCRPQFSRGQFSTSVYENEPEGTSVIS
MVATDQDEGDNGEVVYTMDGPGVEAFQIHQDSGLVTTRRPLQSYERFNLTVVATDRGQPP
LWGTSMLLVEVIDVNDNRPVFVRPPNGTILHVKEEIPLRSSVYEVYATDRDEGLNGAVRY
SFLKTGAGNKDWEYFSIDPISGLIQTAQRLDREKQAMYSLILVANDLGQPVPYETMQPLQ
VALDDIDDNEPIFLRPPKGSPQYQLLSVAEHSQPGTVVGNVTGAVDADEGPNAVVYYFIA
AGNRENNFHLSWAGQLKVLRDLDREREPLFSIIVKASSNRSWTPPRGPRARLLLDPTTDL
TLQEVRIALEDINDQPPRFTKNEYTAGVSTDAKVGSELVQVLALDGDIGNNSLVLYSILA
IRYIRQHSNDSAEAAQVFTLGHLDGVLRTFDLFTAYGPGYFVVDVVAVDLAGHNDTAVIG
IYILREDQRVKIIINEIPDRVRQFQEEFVRLLSNITGAIVNTDDVQFHVDKKGRVNFAQT
ELLIHVVNRDTNRILDVERVIRMIDENKEQLRNLFRNYNVLDVQPATSSRAPEDLSALQM
AIILLALLLLLAAVLFIAMNWYYRTVHKRKLKAIVAGSTGNRGFMDITDMPNTNKYSFDG
ANPVWLDPFCRHAELAAQAEQEDALPDTLSDITDLWNCPARTHGTFGREPSAAKPEEDRY
LRAAIQEYDNIAKLGQIIREGPIKLVQDELGEEGQCSPSPGSLRFRHKQPVELKGPDGIH
VVHGSTGTLLAADLNSLPEDDQKALGRSLETLSADAGAYGERGARTESAKSTPLHKLREV
IAESPLEITEL
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgaggagctcggtcagggtgatcatctacgtggaggatgtcaacgacgaaatcccggtg
ttcacccagcaacagtacagccgcctggggcttcgggagacggccggcattgggacgtca
gtcactgtcgtcagggcgacagacagagacatggggaatgccggtctggtgagctaccgc
atcctgtccggctcagaagggaagtttgagattgatgagagcacagggctcatcactact
atcgactacctggactacgagaccaagaccagctacctgatgaacatctctgccacggat
caggcaccccccaaccaccgaggcttctgcagcgtctacatcagcctgctgaatgagctg
gatgaggccgtgcagttttccaactcctcctatgaggcggccatccccgagaacctggcc
tggggctcggaggtgctgcgggtgcaggcccactccatcgacaacctcaatcagatcacc
tacaagttcgaccccaacaccaacgcccaggctcgggccctcttcaagatcgacggggtc
accggcgtgatcaccgtccagggcccagtggaccgggagaaaggggacttccacgtgctg
acggtggtggcggatgatggcggccccaaggttgactccacagtgaaggtctacatcacg
gtactggatgaaaatgacaacagcccccagtttgatgtcacatcggactcagcagtcagc
gtgccagaggacatcgccctgggccagcgggtggccctggtccaggcccgagaccccgat
gcaggaagcaatgggcaggtgatattttccttggcctcgggaaacatcggtcgggtcttt
gagatcctcaccaccaacggcacctatggagaggtatttgtggtcaaggccctggaccga
gaaagcctggatcgctatattcttaagatccaggcttctgactgtggctccccaccccgg
agaaaggaccacattttgcgggtgaccatcctggatgtcaatgacaaccccccggtcatc
gaaagtccctttggctacaatgtcacagtaaatgagaatgtgggcgggggcactgctgtg
gtccaggttagagccagcgaccgagacattgggctcaacagcctcctgtcctactacatt
acccgggggaatgaggacatgaccttccgcatagatcgggtcacaggagagatcgctacc
cggccctcccctccggaccgcgaacgccagagcttctaccacctggtggtcacagtggaa
gacgaaggcaccccagccctgtcggcaaccacgccagtgtacgtgaccgttctagatgag
aacgacaacgcgcccgtgtttcagcagcagcactacgaggtgtccttggatgagggtcca
gacaccctcaatgccagcctcatcaccgtccgggccctggactgggatgagggccccaat
ggctcagtcatctacgccatcatccagggcaacatcatcaacaccttccacatagacagc
gccacgggcctgatcagcaccatgaaagagttggactatgagatcagccacggacggtac
acgctgctcgtcaccgccactgaccagtgcccagtcctgtcccatcgtctcacctccact
gccacggtgctggtgaacctgaatgacatcaacgacaaccggcccacctttccccaggcc
tacgaggggccttttgacatcacggaggggcagcctggccccagggtgtggaccttcctg
gctgtggacggcgattcagggcccaacgggcaggtggaatacagcattgtgggcggggac
cctctgggggagtttgtgatctctccggtggagggggagctgcgagtccgtaaggatgtt
gagctggaccgggagaacattgcgttctacaacctcaccatctgcgcacgggacaggggg
acccccgccctcagctccacgatcctggtgggcgtgagggtcttggatatcaatgacaac
gacccagtgctgctgaacttgcccctgaatgtctccatcagcgagaacagccccgtctcc
agtttcgtggcccacattcacgccagtgacgctgacagtggccgcaatgccctcctgacc
ttcaacctgacagccggcaacagggaccgggccttcctcatcaatgccacgacaggtgtt
gtctctgtgaaccgcccactggacagggagaggatcccagaatacaaactgaccgtctcc
gtcaaggacaaccctgagaatccacgcatcgcccggagggattttgacttgctggtggtt
ctaatcgctgatgagaatgataatcatccactgttcacccaagactcctacgaggcagag
atcatggagaactcccctgcagggtctgtgctggtgaagtcccccttgaaccgagagctg
gtcgccacctatgaggtcaccatctcggtgcttgacggtgccagtgaccttcccgagcgc
gctgtcagcgtgcccaacgccaagctgaccgtcaacatcctggacgtcaatgacaacaca
ccccagttccggccctttgggatcacctacttcatggagcgggtgctggaaggggcgacg
ccgggcaccaccctcatctcagtggccgccgtggaccccgacaagggggccaatggacaa
attacctacactctgctgaacctggtgcccccgggatatgcccagcttgaggatgattct
acaggaaaggtcatcgccaaccggacggtggactacgaggaggtgcagtggctcaacttt
acggtccgagcttcggacaatggttctccacccagagcggccgagatccccgtgtacctg
gagattgtggacgtcaacgacaacaaccccgtcttcggacaggcggcctaccagatacct
gtcttagaggatgtgcccctgggcacggtccttttgacagttacagccacggatgctgac
tcgggccccttcgccctcatccaatatagcctgggggatggagaaggcaagtttgggatc
gatccttccacgggagacatctttgtgctctccgccttggatcgggagaagaaggaccac
tacatcctcacggctgtggccagagacaaccccggagatgtatccagtaaccgccgggag
aactcggtgcaggtggtgatcacggtgctggatgtcaatgactgccggccccaattctcc
cggggccagttcagcaccagtgtctatgagaatgaacccgaaggcacatccgtcatcagc
atggtggccaccgaccaggatgagggtgacaacggagaggtggtctacaccatggatggg
cccggcgtggaggccttccagatccaccaggactcggggctggtgaccacccggcggccc
ctgcagtcgtatgagaggttcaacctgacggtggtggcgacggatcgggggcagcccccg
ctctggggcacctccatgctgctggtcgaggtgattgatgtcaacgacaaccggcccgtc
tttgtccgcccccccaacggcaccatcctccatgtcaaggaggagattcccctgcgctcc
agcgtgtatgaggtctacgccaccgacagggatgaggggctcaacggggccgtccgctac
agcttcctcaagacaggtgccggaaacaaggactgggaatacttctccatcgatcccatc
agcggcctcatccagacggctcagcgtcttgaccgtgagaagcaggccatgtacagtctg
attctggtggctaatgacctgggccagccggtcccctatgagacaatgcagcccctgcag
gtagctctggatgacattgatgacaacgagccaatcttcctgagacccccgaagggcagc
ccccagtaccagctgctgtccgtggccgagcattcccagccgggcaccgtggtgggcaac
gtgacgggcgccgtggacgccgacgagggccccaacgctgtcgtctactattttatcgca
gccggaaacagggagaataatttccatctgagctgggcggggcagctcaaggtgttgcgg
gacttggaccgggagcgggagcccctcttctccatcatcgtcaaggcctcgagcaaccgc
agctggacgcccccccggggaccccgggcccgcctgctgctggacccgaccaccgacctg
accctgcaggaggtccgcatcgccctggaggacatcaacgaccagcccccgcgtttcacc
aagaacgagtacacggccggtgtgagcacggatgccaaagtgggctcggagctggtccag
gtgctggccctggacggcgacatcggcaacaacagcctggtgctgtacagcatcctggcc
atccgctacatccgccagcactccaacgactcggccgaggccgcccaagtcttcaccttg
gggcacctggatggggtcctgcggaccttcgacctcttcaccgcctacgggcccggctac
ttcgtggtggacgtggtggcggtggacctggccgggcacaacgacacggccgtgatcggc
atctacatcctgcgggaggaccagagggtcaagatcatcatcaacgagatcccggaccgc
gtacgccagttccaggaggagttcgtccgtctgctgtccaacatcaccggcgccatcgtc
aacaccgacgacgtccagttccacgtggacaagaagggccgcgtgaacttcgcccagacg
gagctgctgatccatgtggtgaaccgggacacgaacaggattctggacgtggagcgggtg
atccggatgatcgacgagaacaaggagcagctgcggaatcttttccggaactacaacgtc
ctggacgtgcagccggccacctcctcccgggcccccgaagacctgtcagccctgcagatg
gcgatcatcctcttggccctcctcctgctcctcgcggccgtcctcttcatcgccatgaac
tggtactaccggacagtacacaagaggaaactcaaagccatcgtggcaggatccacaggg
aaccgtggcttcatggacatcacggacatgcccaacaccaacaagtactccttcgacggt
gccaaccctgtgtggctggacccgttctgccgtcacgcggagctggcggcccaggcggag
caggaggacgccctgccagacaccctcagcgacatcaccgacctctggaactgccccgcg
cgcacccacggcacgttcgggagggagccgtcggccgcgaagcccgaggaggaccgctac
ctgcgcgccgccatccaggaatacgacaacatcgccaagctgggacagatcatccgtgag
gggcccatcaagttggtgcaggacgagctgggcgaggagggccagtgcagccccagcccc
gggagcctgcgctttcgccacaagcagccggtggagctgaaggggccggatggcatccac
gtggtgcacggcagcacgggcaccctgttggccgccgacctcaacagtctccccgaggat
gaccagaaagccctgggccgctcgctggagacgctgagcgccgacgcgggggcctacgga
gagcgcggcgcccgcaccgagtcagccaagtccactccgctgcacaagctgcgggaggtc
atcgccgagagcccgctggagatcacggagctatga
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