KEGG   Ornithorhynchus anatinus (platypus): 100077192
Entry
100077192         CDS       T01045                                 
Symbol
CDH23
Name
(RefSeq) cadherin-23 isoform X1
  KO
K06813  cadherin 23
Organism
oaa  Ornithorhynchus anatinus (platypus)
Brite
KEGG Orthology (KO) [BR:oaa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:oaa03037]
    100077192 (CDH23)
   04515 Cell adhesion molecules [BR:oaa04515]
    100077192 (CDH23)
Cilium and associated proteins [BR:oaa03037]
 Primary cilia and associated proteins
  USH complex and associated proteins
   100077192 (CDH23)
Cell adhesion molecules [BR:oaa04515]
 Cadherins
  Major cadherins
   100077192 (CDH23)
SSDB
Motif
Pfam: Cadherin Cadherin_3 Cadherin_pro Sde0182_C TFIIB_C_1
Other DBs
NCBI-GeneID: 100077192
NCBI-ProteinID: XP_039767444
Ensembl: ENSOANG00000041676
LinkDB
Position
3:complement(85474327..85856751)
AA seq 1871 aa
MRSSVRVIIYVEDVNDEIPVFTQQQYSRLGLRETAGIGTSVTVVRATDRDMGNAGLVSYR
ILSGSEGKFEIDESTGLITTIDYLDYETKTSYLMNISATDQAPPNHRGFCSVYISLLNEL
DEAVQFSNSSYEAAIPENLAWGSEVLRVQAHSIDNLNQITYKFDPNTNAQARALFKIDGV
TGVITVQGPVDREKGDFHVLTVVADDGGPKVDSTVKVYITVLDENDNSPQFDVTSDSAVS
VPEDIALGQRVALVQARDPDAGSNGQVIFSLASGNIGRVFEILTTNGTYGEVFVVKALDR
ESLDRYILKIQASDCGSPPRRKDHILRVTILDVNDNPPVIESPFGYNVTVNENVGGGTAV
VQVRASDRDIGLNSLLSYYITRGNEDMTFRIDRVTGEIATRPSPPDRERQSFYHLVVTVE
DEGTPALSATTPVYVTVLDENDNAPVFQQQHYEVSLDEGPDTLNASLITVRALDWDEGPN
GSVIYAIIQGNIINTFHIDSATGLISTMKELDYEISHGRYTLLVTATDQCPVLSHRLTST
ATVLVNLNDINDNRPTFPQAYEGPFDITEGQPGPRVWTFLAVDGDSGPNGQVEYSIVGGD
PLGEFVISPVEGELRVRKDVELDRENIAFYNLTICARDRGTPALSSTILVGVRVLDINDN
DPVLLNLPLNVSISENSPVSSFVAHIHASDADSGRNALLTFNLTAGNRDRAFLINATTGV
VSVNRPLDRERIPEYKLTVSVKDNPENPRIARRDFDLLVVLIADENDNHPLFTQDSYEAE
IMENSPAGSVLVKSPLNRELVATYEVTISVLDGASDLPERAVSVPNAKLTVNILDVNDNT
PQFRPFGITYFMERVLEGATPGTTLISVAAVDPDKGANGQITYTLLNLVPPGYAQLEDDS
TGKVIANRTVDYEEVQWLNFTVRASDNGSPPRAAEIPVYLEIVDVNDNNPVFGQAAYQIP
VLEDVPLGTVLLTVTATDADSGPFALIQYSLGDGEGKFGIDPSTGDIFVLSALDREKKDH
YILTAVARDNPGDVSSNRRENSVQVVITVLDVNDCRPQFSRGQFSTSVYENEPEGTSVIS
MVATDQDEGDNGEVVYTMDGPGVEAFQIHQDSGLVTTRRPLQSYERFNLTVVATDRGQPP
LWGTSMLLVEVIDVNDNRPVFVRPPNGTILHVKEEIPLRSSVYEVYATDRDEGLNGAVRY
SFLKTGAGNKDWEYFSIDPISGLIQTAQRLDREKQAMYSLILVANDLGQPVPYETMQPLQ
VALDDIDDNEPIFLRPPKGSPQYQLLSVAEHSQPGTVVGNVTGAVDADEGPNAVVYYFIA
AGNRENNFHLSWAGQLKVLRDLDREREPLFSIIVKASSNRSWTPPRGPRARLLLDPTTDL
TLQEVRIALEDINDQPPRFTKNEYTAGVSTDAKVGSELVQVLALDGDIGNNSLVLYSILA
IRYIRQHSNDSAEAAQVFTLGHLDGVLRTFDLFTAYGPGYFVVDVVAVDLAGHNDTAVIG
IYILREDQRVKIIINEIPDRVRQFQEEFVRLLSNITGAIVNTDDVQFHVDKKGRVNFAQT
ELLIHVVNRDTNRILDVERVIRMIDENKEQLRNLFRNYNVLDVQPATSSRAPEDLSALQM
AIILLALLLLLAAVLFIAMNWYYRTVHKRKLKAIVAGSTGNRGFMDITDMPNTNKYSFDG
ANPVWLDPFCRHAELAAQAEQEDALPDTLSDITDLWNCPARTHGTFGREPSAAKPEEDRY
LRAAIQEYDNIAKLGQIIREGPIKLVQDELGEEGQCSPSPGSLRFRHKQPVELKGPDGIH
VVHGSTGTLLAADLNSLPEDDQKALGRSLETLSADAGAYGERGARTESAKSTPLHKLREV
IAESPLEITEL
NT seq 5616 nt   +upstreamnt  +downstreamnt
atgaggagctcggtcagggtgatcatctacgtggaggatgtcaacgacgaaatcccggtg
ttcacccagcaacagtacagccgcctggggcttcgggagacggccggcattgggacgtca
gtcactgtcgtcagggcgacagacagagacatggggaatgccggtctggtgagctaccgc
atcctgtccggctcagaagggaagtttgagattgatgagagcacagggctcatcactact
atcgactacctggactacgagaccaagaccagctacctgatgaacatctctgccacggat
caggcaccccccaaccaccgaggcttctgcagcgtctacatcagcctgctgaatgagctg
gatgaggccgtgcagttttccaactcctcctatgaggcggccatccccgagaacctggcc
tggggctcggaggtgctgcgggtgcaggcccactccatcgacaacctcaatcagatcacc
tacaagttcgaccccaacaccaacgcccaggctcgggccctcttcaagatcgacggggtc
accggcgtgatcaccgtccagggcccagtggaccgggagaaaggggacttccacgtgctg
acggtggtggcggatgatggcggccccaaggttgactccacagtgaaggtctacatcacg
gtactggatgaaaatgacaacagcccccagtttgatgtcacatcggactcagcagtcagc
gtgccagaggacatcgccctgggccagcgggtggccctggtccaggcccgagaccccgat
gcaggaagcaatgggcaggtgatattttccttggcctcgggaaacatcggtcgggtcttt
gagatcctcaccaccaacggcacctatggagaggtatttgtggtcaaggccctggaccga
gaaagcctggatcgctatattcttaagatccaggcttctgactgtggctccccaccccgg
agaaaggaccacattttgcgggtgaccatcctggatgtcaatgacaaccccccggtcatc
gaaagtccctttggctacaatgtcacagtaaatgagaatgtgggcgggggcactgctgtg
gtccaggttagagccagcgaccgagacattgggctcaacagcctcctgtcctactacatt
acccgggggaatgaggacatgaccttccgcatagatcgggtcacaggagagatcgctacc
cggccctcccctccggaccgcgaacgccagagcttctaccacctggtggtcacagtggaa
gacgaaggcaccccagccctgtcggcaaccacgccagtgtacgtgaccgttctagatgag
aacgacaacgcgcccgtgtttcagcagcagcactacgaggtgtccttggatgagggtcca
gacaccctcaatgccagcctcatcaccgtccgggccctggactgggatgagggccccaat
ggctcagtcatctacgccatcatccagggcaacatcatcaacaccttccacatagacagc
gccacgggcctgatcagcaccatgaaagagttggactatgagatcagccacggacggtac
acgctgctcgtcaccgccactgaccagtgcccagtcctgtcccatcgtctcacctccact
gccacggtgctggtgaacctgaatgacatcaacgacaaccggcccacctttccccaggcc
tacgaggggccttttgacatcacggaggggcagcctggccccagggtgtggaccttcctg
gctgtggacggcgattcagggcccaacgggcaggtggaatacagcattgtgggcggggac
cctctgggggagtttgtgatctctccggtggagggggagctgcgagtccgtaaggatgtt
gagctggaccgggagaacattgcgttctacaacctcaccatctgcgcacgggacaggggg
acccccgccctcagctccacgatcctggtgggcgtgagggtcttggatatcaatgacaac
gacccagtgctgctgaacttgcccctgaatgtctccatcagcgagaacagccccgtctcc
agtttcgtggcccacattcacgccagtgacgctgacagtggccgcaatgccctcctgacc
ttcaacctgacagccggcaacagggaccgggccttcctcatcaatgccacgacaggtgtt
gtctctgtgaaccgcccactggacagggagaggatcccagaatacaaactgaccgtctcc
gtcaaggacaaccctgagaatccacgcatcgcccggagggattttgacttgctggtggtt
ctaatcgctgatgagaatgataatcatccactgttcacccaagactcctacgaggcagag
atcatggagaactcccctgcagggtctgtgctggtgaagtcccccttgaaccgagagctg
gtcgccacctatgaggtcaccatctcggtgcttgacggtgccagtgaccttcccgagcgc
gctgtcagcgtgcccaacgccaagctgaccgtcaacatcctggacgtcaatgacaacaca
ccccagttccggccctttgggatcacctacttcatggagcgggtgctggaaggggcgacg
ccgggcaccaccctcatctcagtggccgccgtggaccccgacaagggggccaatggacaa
attacctacactctgctgaacctggtgcccccgggatatgcccagcttgaggatgattct
acaggaaaggtcatcgccaaccggacggtggactacgaggaggtgcagtggctcaacttt
acggtccgagcttcggacaatggttctccacccagagcggccgagatccccgtgtacctg
gagattgtggacgtcaacgacaacaaccccgtcttcggacaggcggcctaccagatacct
gtcttagaggatgtgcccctgggcacggtccttttgacagttacagccacggatgctgac
tcgggccccttcgccctcatccaatatagcctgggggatggagaaggcaagtttgggatc
gatccttccacgggagacatctttgtgctctccgccttggatcgggagaagaaggaccac
tacatcctcacggctgtggccagagacaaccccggagatgtatccagtaaccgccgggag
aactcggtgcaggtggtgatcacggtgctggatgtcaatgactgccggccccaattctcc
cggggccagttcagcaccagtgtctatgagaatgaacccgaaggcacatccgtcatcagc
atggtggccaccgaccaggatgagggtgacaacggagaggtggtctacaccatggatggg
cccggcgtggaggccttccagatccaccaggactcggggctggtgaccacccggcggccc
ctgcagtcgtatgagaggttcaacctgacggtggtggcgacggatcgggggcagcccccg
ctctggggcacctccatgctgctggtcgaggtgattgatgtcaacgacaaccggcccgtc
tttgtccgcccccccaacggcaccatcctccatgtcaaggaggagattcccctgcgctcc
agcgtgtatgaggtctacgccaccgacagggatgaggggctcaacggggccgtccgctac
agcttcctcaagacaggtgccggaaacaaggactgggaatacttctccatcgatcccatc
agcggcctcatccagacggctcagcgtcttgaccgtgagaagcaggccatgtacagtctg
attctggtggctaatgacctgggccagccggtcccctatgagacaatgcagcccctgcag
gtagctctggatgacattgatgacaacgagccaatcttcctgagacccccgaagggcagc
ccccagtaccagctgctgtccgtggccgagcattcccagccgggcaccgtggtgggcaac
gtgacgggcgccgtggacgccgacgagggccccaacgctgtcgtctactattttatcgca
gccggaaacagggagaataatttccatctgagctgggcggggcagctcaaggtgttgcgg
gacttggaccgggagcgggagcccctcttctccatcatcgtcaaggcctcgagcaaccgc
agctggacgcccccccggggaccccgggcccgcctgctgctggacccgaccaccgacctg
accctgcaggaggtccgcatcgccctggaggacatcaacgaccagcccccgcgtttcacc
aagaacgagtacacggccggtgtgagcacggatgccaaagtgggctcggagctggtccag
gtgctggccctggacggcgacatcggcaacaacagcctggtgctgtacagcatcctggcc
atccgctacatccgccagcactccaacgactcggccgaggccgcccaagtcttcaccttg
gggcacctggatggggtcctgcggaccttcgacctcttcaccgcctacgggcccggctac
ttcgtggtggacgtggtggcggtggacctggccgggcacaacgacacggccgtgatcggc
atctacatcctgcgggaggaccagagggtcaagatcatcatcaacgagatcccggaccgc
gtacgccagttccaggaggagttcgtccgtctgctgtccaacatcaccggcgccatcgtc
aacaccgacgacgtccagttccacgtggacaagaagggccgcgtgaacttcgcccagacg
gagctgctgatccatgtggtgaaccgggacacgaacaggattctggacgtggagcgggtg
atccggatgatcgacgagaacaaggagcagctgcggaatcttttccggaactacaacgtc
ctggacgtgcagccggccacctcctcccgggcccccgaagacctgtcagccctgcagatg
gcgatcatcctcttggccctcctcctgctcctcgcggccgtcctcttcatcgccatgaac
tggtactaccggacagtacacaagaggaaactcaaagccatcgtggcaggatccacaggg
aaccgtggcttcatggacatcacggacatgcccaacaccaacaagtactccttcgacggt
gccaaccctgtgtggctggacccgttctgccgtcacgcggagctggcggcccaggcggag
caggaggacgccctgccagacaccctcagcgacatcaccgacctctggaactgccccgcg
cgcacccacggcacgttcgggagggagccgtcggccgcgaagcccgaggaggaccgctac
ctgcgcgccgccatccaggaatacgacaacatcgccaagctgggacagatcatccgtgag
gggcccatcaagttggtgcaggacgagctgggcgaggagggccagtgcagccccagcccc
gggagcctgcgctttcgccacaagcagccggtggagctgaaggggccggatggcatccac
gtggtgcacggcagcacgggcaccctgttggccgccgacctcaacagtctccccgaggat
gaccagaaagccctgggccgctcgctggagacgctgagcgccgacgcgggggcctacgga
gagcgcggcgcccgcaccgagtcagccaagtccactccgctgcacaagctgcgggaggtc
atcgccgagagcccgctggagatcacggagctatga

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