Ornithorhynchus anatinus (platypus): 100077201
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Entry
100077201 CDS
T01045
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
oaa
Ornithorhynchus anatinus (platypus)
Pathway
oaa04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
oaa00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100077201 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
oaa00536
]
100077201 (COL13A1)
Glycosaminoglycan binding proteins [BR:
oaa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100077201 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
100077201
NCBI-ProteinID:
XP_028916705
Ensembl:
ENSOANG00000031524
LinkDB
All DBs
Position
3:complement(87395944..87597325)
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AA seq
754 aa
AA seq
DB search
MVEAAGRAGAHPGGPGKGPAEEGRRLGVPLLLSCALFGVSWFALVLSLLVYFRTSDLQSR
VSQLEAQRSPWLPADQMETAILGRVNQLLDEKLKLHLPRQREIRDTSQRCSCPAGPPGPT
GRPGLPGEKGGLGIPGRMGLKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFPGFPGPIG
LDGKPGYPGPKGDMGITGSKGQPGLPGQKGEKGQCGDYPHRDSLSSTLAALRSNQILTLK
GEQGQAGIQGPPGPPGPPGPSGPMGPLGNPGQPGPVGPPGRAGEPGKPGKDGKGLPGPPG
PKGDPGIQGVHGRKGERGMPGIPGKHGAKGSPGTAAAGMKGEPGTPGTKGEKGSSGLPGL
PGYVGQKGEKGDAGNAIGLGQREPGPPGLPGPPGPKGEAGQSGQAGTPGFQGQKGEPGAS
GEQGPPGLKGSKGDPGKGEMVDYNGNINEALQEIRTLALMGPPGLPGQPGPPGSPGTPGQ
KGEIGLPGPPGHDGEKGPRGKSGEGGPPGPQGPPGKEGPPGMKGENGHLGNPGVKGEKGE
AGQVGSPGLDGPTGEKGDQGIPGLPGLPGPIGLPGFTGEKGEVGEKGDAGAPISGPPGPE
GPPGPAGLQGVPGPKGEAGLDGAKGEKGTQGEKGDRGPLGLPGASGLDGRPGSPGTPGPI
GVPGPAGPKGERGSKGDPGTTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDKGDQ
GAPGLDAPCPLGEDGLPVQGCWNKGQTPWLIAKK
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggtggaggccgcgggccgggcaggtgcccaccccggcgggccgggcaaaggaccggcc
gaggaagggcgacgtttgggggtgccgctcctgctgagctgtgcgctcttcggggtgtcc
tggtttgctctggtgctgagcctcctcgtctacttcaggacctcagacctgcagtccagg
gtttcgcagttggaagcccagcgatcgccctggctgcccgcagaccagatggagacggct
attttgggacgagtgaaccagctgctggatgagaaattaaagcttcacctgcccagacaa
cgggaaatccgggatacctcccagagatgtagctgtccagcaggacctcctggtcccaca
ggaagacctggacttccgggagagaaaggtggccttgggatcccgggacgaatgggacta
aaggggcaacccggagagaagggagccccaggagatgcggggatgtccattataggtcca
cgcggccctcctggccagcccggcacaagaggttttcccggatttccgggaccaattggt
ctggacggcaagccgggttaccccgggccaaagggagacatgggcataactggttccaag
gggcaaccgggactaccaggacaaaaaggagaaaagggtcaatgtggggactacccgcac
agggactccctcagcagtactctggcagccctgcgctccaaccagatcctaaccctgaag
ggtgaacaggggcaggcgggcatccagggaccaccaggaccacccgggcctcccgggccc
tctggaccgatgggacctctggggaaccccggacagccggggccagtcgggccccccggc
agagcaggagaaccggggaagccgggcaaagatggaaagggcttacctgggcctccagga
ccaaagggagaccctgggatccagggcgtccacggacggaagggggagaggggcatgcca
gggatcccgggaaagcatggagccaagggatctcccggaacagctgctgcagggatgaag
ggtgagccggggactccaggaacaaagggtgaaaaaggaagctctggcctccctggactt
cctggatacgtggggcagaagggagagaagggagatgccggcaacgccattggactaggc
caaagggaacccggccccccaggcttacccggccccccgggaccaaagggagaagctggc
caatccggccaagcgggaaccccaggattccagggacaaaagggggaaccgggagcatcg
ggagaacagggacctcctggcctaaagggctccaagggagatccaggcaaaggagaaatg
gtggattacaacggcaacatcaatgaagctctccaggaaatccgcaccctggctctgatg
ggtcctcctggtctcccagggcaaccaggaccacctggatccccagggacccccggacag
aagggtgaaatcggtttgccggggcctccggggcatgatggggagaagggacctcggggc
aaatcaggagaggggggaccccctgggccccaagggcctccaggaaaggaaggacctcca
gggatgaaaggagaaaatggtcatctgggcaaccctggagtgaagggagagaaaggggag
gcaggacaggttggctcaccggggcttgatggtccaactggagagaaaggagatcaaggg
ataccaggacttcctggattgccaggcccaatcggcctcccgggatttacaggagagaag
ggagaagttggagagaagggggacgcaggagcaccgatatctgggcccccagggccggaa
ggccccccaggacctgcaggtctccaaggtgttcccggaccaaagggggaagccggactt
gatggagcgaaaggggagaagggcacccagggagagaaaggagaccgaggtccattggga
ttgcctggtgcttcaggtttggacggcaggcctgggtcaccgggcactccaggaccaatt
ggagttccaggtccagcaggaccaaaaggagagaggggcagtaaaggagatcctgggacc
actggaccaacaggagcggcaggacttcctggtttacatggaccaccgggtgacaaagga
aaccggggggagagggggaagaaaggctctagggggcctaaaggggataagggagaccaa
ggagcgcctggattagatgccccctgtccattgggagaagatggcttgccagttcaggga
tgctggaataagggccagactccatggctgatagccaaaaagtga
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