Oleispira antarctica: OLEAN_C32790
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Entry
OLEAN_C32790 CDS
T04028
Symbol
truB
Name
(GenBank) TRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
oai
Oleispira antarctica
Brite
KEGG Orthology (KO) [BR:
oai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oai03016
]
OLEAN_C32790 (truB)
Enzymes [BR:
oai01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OLEAN_C32790 (truB)
Transfer RNA biogenesis [BR:
oai03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OLEAN_C32790 (truB)
Prokaryotic type
OLEAN_C32790 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Peptidase_M29
Motif
Other DBs
NCBI-ProteinID:
CCK77455
UniProt:
R4YRD5
LinkDB
All DBs
Position
complement(3722229..3723194)
Genome browser
AA seq
321 aa
AA seq
DB search
MARVKKGRDISGIIVLNKPLGLSSNQVLQKIKWLLGAKKAGHTGALDPMASGVLPLCFGD
ATKFSQILLESTKGYVTTCKLGEIRSTGDQDGEIISVKPIPDFDAASVETILKNFRGLIT
QVPPMYSALKHEGRPLYELARKGIELDLKALKQRQVTIHSLLVLDIRQDVGEIDLEVVCS
KGTYIRSLVEDIGNELGCGAYVSMLHRNQAGPFSEAQFVDYQTLLDLEDNYPVVAERHAV
MDEMLIHSAEAIPDWAKIELTLHEGHKILHGQRVKTSFPLTPQVQLWVNTPDGVVFVGVG
DITDNGTLIPKRVFQVDLPSE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtgtcaaaaaaggtcgcgatataagcggcattatagtgctcaataaaccgttg
ggcctttcttcaaatcaagttttacaaaagataaagtggcttttgggcgctaaaaaagca
ggtcatactggcgcgcttgaccccatggcatctggtgtacttcctttgtgttttggggat
gcaactaagttctcgcagattctgcttgagtcaacaaagggttatgtcaccacctgtaag
ttgggtgagattcgttcaacgggcgaccaagatggcgagattatctcggtaaaaccaata
cctgattttgatgcggcttctgttgaaacaattctgaaaaatttccgtggtctaatcact
caagttcctcccatgtattccgcgcttaagcatgagggtaggcctctatatgagcttgcg
cgtaaaggtattgagctggatttgaaggctttgaaacagcgtcaagttacgattcattct
ttgctggtgttggatattcgtcaagacgtgggtgagattgatcttgaagttgtgtgctct
aaaggtacttatattcgcagcttggtcgaagacattggtaatgaattaggctgtggtgct
tatgtgagtatgttgcatcgcaatcaggcgggtccattttcagaagctcaattcgttgat
tatcaaactctgttggatcttgaggataactatcctgttgtggcagagcgccatgcggtt
atggatgaaatgttgattcattctgcagaagccattcctgactgggctaaaattgagcta
accttgcacgaagggcacaaaattttacacgggcagagagtgaaaactagcttcccgctg
acgcctcaagtacaattatgggttaatactcctgatggagttgtctttgttggcgttggt
gacattactgacaacggaacactgataccgaaacgtgtttttcaggtcgacttgccaagc
gagtaa
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