Ooceraea biroi (clonal raider ant): 105274978
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Entry
105274978 CDS
T05778
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
obo
Ooceraea biroi (clonal raider ant)
Pathway
obo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105274978
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obo03041
]
105274978
Enzymes [BR:
obo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105274978
Spliceosome [BR:
obo03041
]
Complex A
U2 snRNP components
U2 related factors
105274978
Complex B
105274978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
105274978
NCBI-ProteinID:
XP_011329810
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All DBs
Position
1:complement(17307522..17311608)
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AA seq
1029 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSTEPEKKRRRSRSRDRERDKGRHRERRSRSRDRDRERA
DRRDRSDRDRDRERKRGDSKEKRLTGSKSSRSGKERSNRSRSRDRKDKDKGDSEELPFDH
TKLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKTSILANLQLPMKKWSLE
DDSDEETPVVQNNTKETKEEGVKEEVEEVKEEVKDEEEEIDPLDAFMAEVQEEVRKVNKL
DNKAPKSANNGTNSGAQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGENLHE
TAAGIANKQKRELAKVDHATTDYQPFRKSFYVEVPEIARMTPEEVEAYKEELEGIRVKGK
GCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSGKTLA
FLLPMFRHILDQSPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYGGTGI
SEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMR
IMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSVICKDVEQHVVVLEEDQK
FYKLLEILGHYQDKGSAIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDSTILDF
KAGRTKLLVATSVAARGLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYTFITS
EQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFDESEA
ALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPTAASITVPGQPV
PSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQLAAK
LNTKLNYQPREEDLVESDAETGEQTFRKYEEELEINDFPQQARWRVTSKEALAQISEYSE
AGLTVRGTYIAPGKTPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQASGAHT
ASRGRYKVL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggtacgaagcagcgacaaggacagacatcaccgacgaagatccagatcgagatcgaga
tccagatcgaccgaacccgaaaagaaacggcgccggtcgagaagcagagaccgagaaagg
gacaagggacgacacagggaacggaggagccgttctcgggacagagacagggagagggct
gacaggagggaccgttccgacagggacagggatcgcgagagaaaacgtggagacagtaaa
gaaaagcgtcttacaggctcaaagtcttcacgctctggcaaagaacgttcgaacaggtct
cggtcacgcgatagaaaggataaagacaagggcgacagtgaagagctgcctttcgatcac
acgaaattagataaggaagaagaacaaaaacggctagaattggaaatgcaaaaaaggaga
gaaaggatagaaagatggcgggcagagaggaagaaaaaagagctggaagcaaccaaaaaa
gacggtaagacatctattttggcaaatcttcagctacccatgaaaaagtggtcccttgag
gatgatagtgacgaagagactcctgtggtacagaataacaccaaggagacaaaggaggaa
ggtgtaaaggaagaagttgaggaagtaaaggaggaagtgaaagatgaagaagaggagatt
gatccgcttgatgcttttatggcagaggttcaagaggaagtgaggaaagtaaataagctt
gacaacaaagctccgaaaagtgccaacaatggcaccaattctggagcgcagagtggtggc
gtggtcattgtgactggcgtggccaagaagaaggttcagaaacaaaagggagaattgatt
gagcaaaatcaagacggattagagtattccagcgaagaagagggcgagaatcttcacgaa
accgcagctggtatcgcgaacaagcagaagcgagaattggctaaggtcgatcacgccacg
acagattatcagccattccgaaagtccttctacgtggaggttcctgaaatcgcaagaatg
acgccagaagaagtggaagcgtacaaggaagaattagagggtattcgcgtgaaaggtaaa
ggctgcccgaagcctatcaagtcttgggcgcaatgcggcgttaccaagaaggaactggag
gtgttgaagaaactcggttacgagaaaccgacacccatccagtgccaggcaatcccggct
ataatgtctggtcgggatcttataggtattgcaaaaacaggtagtggaaaaacactggcg
tttctgttaccaatgtttcgccatattctcgatcaatcgccattagccgacggtgatgga
cctatcgctttgattatgacaccgaccagagagttgtgcatgcagatcggcagagattca
aagaaatttacaaaatcgttagggctttcacacgtgtgcgtttatggcgggaccggcatt
tccgagcaaatagccgaacttaaaagaggagctgagatcatcgtgtgcacgcctggaagg
atgatcgacatgctggctgccaacagcggacgagtgacgaatttgcgtagagtgacgtac
gttgtattggacgaggctgacagaatgtttgacatgggtttcgagccgcaggtgatgcgc
atcatggagaacgtgaggccggacaggcagacagtattgttcagcgcaacgtttccgagg
caaatggaggcgctggcgagaagaatactcacgaggccagtggaggtgcaagtcggagga
cgttccgttatttgcaaggatgtcgagcaacacgtggtcgtgctggaggaggatcagaag
ttctacaagttgctggagatcctcgggcattaccaggacaaaggctccgccatcatattc
gtagacaagcaggagaatgcagacaccttgcttaaggatcttatgaaggcttcgtattcc
tgcatgtcccttcatggcggcatagatcaatgtgacagagattcaaccattctggacttc
aaagctggtcgtacgaaattgctcgtggcaacgtccgtggccgccagaggtctggacgtt
aagcagttggtgttagtggtcaattatgattgtcctaatcactacgaggattacgtgcac
cgatgcggcaggactggcagggctggaaataagggatatgcgtacactttcatcacgtca
gagcaggaacgttacgctggcgacattttacgcgcgcacgagttagcgggcgttccggtt
ccggaacccttgcgtcagttatgggagggttacaaggcgcgtcaagccgcggacgggaag
aaagtgcataccggtggcggtttcagcggcaaaggattcaagtttgatgaatcggaggcc
gctttggcgaacgagaagaagaaattccagaaggcagctttgggcttgcaagattccgac
gacgaagacatagaaaatgatatcgaccagcagatcgagagtatgctggcacctaagcga
acagttcgcgagatagccagacctaccgcggctagcatcacggttcctggtcaaccggta
cctagtgctaccgacaagctagaattggccagaagattagcctcgaagataaacatcgca
aagaatctgggcgccgaggcgaaaggtgcaactcagcaagctgcggaagccatactcaag
ggtgcgggacctacgaacctcattacggcgaagacagtggcggaacaactggcggcgaaa
ctgaacaccaaattgaattatcaaccacgtgaggaagatctggtagagagcgacgcggaa
acgggcgagcaaacgttccgcaagtacgaggaggagcttgagatcaacgacttcccgcaa
caagcgaggtggcgagtcacgagcaaagaagctctggctcagatctcggaatactccgag
gcgggtttgaccgtgagaggaacgtatatcgcacctggaaaaacgcctccggagggtgag
aggaagctgtacctggcgatagaatcgacgagcgaattggcggtgagcaaggccaaggcg
gaggtttctagacttatcaaggaggaactcatcaagctacaggcatctggtgctcacact
gcgtcacgtggtcgatacaaagttttgtaa
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