Oryza brachyantha (malo sina): 102711127
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Entry
102711127 CDS
T02995
Name
(RefSeq) ubiquitin receptor RAD23b isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
obr
Oryza brachyantha (malo sina)
Pathway
obr03420
Nucleotide excision repair
obr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
obr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
102711127
09124 Replication and repair
03420 Nucleotide excision repair
102711127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
obr03051
]
102711127
03400 DNA repair and recombination proteins [BR:
obr03400
]
102711127
Proteasome [BR:
obr03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
102711127
DNA repair and recombination proteins [BR:
obr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
102711127
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
Rad60-SLD
CUE
TECR_N
UBA_3
Ubiquitin_2
RNase_PH_C
Dsc3_N
Motif
Other DBs
NCBI-GeneID:
102711127
NCBI-ProteinID:
XP_006646966
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Position
2:3126022..3131918
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AA seq
371 aa
AA seq
DB search
MKLTVKTLKGTHFEIRVQPHDTIMAVKKNIEEIQGKDSYPWGQQLLIHNGKVLKDESTLE
ENKVSEDGFLVVMLSKSKASGSSGALTALASSTPSTRQAPPPDAPQQATQPPAAPSTTPQ
LERPPADDPSNAYGQAASNLLSGSSLDTTINQLMEMGGGSWDRDKVKRALRAAYNNPERA
VEYLYSGIPVTAEVAVPAGGQGANTTEPSSTTREASLSGIPNTSPLNLFPQQGGPNDGGG
AGGGTLEFLRHNQQFQALREMVHTNPQILQPMLQELSKQNPQLLRLIQENHDEFLQLINE
PFDGADGDFLDQPDQDEMPHAINVTPEEQEAIGRLEAMGFDRARVIEAFFACDRNEQLAV
NYLLEHAADED
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgaccgtgaagaccctcaagggcacccacttcgagatccgggtgcagccgcac
gacactattatggctgtcaagaagaacatcgaagagatacaaggaaaggatagttaccca
tggggtcaacaacttctgattcacaatggcaaggttttgaaagatgaaagtacattggaa
gagaacaaagtcagtgaagatgggtttctagttgtcatgctgagtaagagtaaagcttct
ggttccagtggagctttaactgcactggcttcgagcactccttcgaccaggcaagcacct
cctccagatgctccacaacaagctactcaacccccagctgcaccttcaacaacaccacag
ctggaaaggccacctgcagatgacccttcaaatgcatatggtcaagcagcatcaaatcta
ttgtcgggaagcagccttgatactacaattaaccagctgatggagatgggtggtggcagc
tgggacagggataaagtcaaaagggctctacgtgcggcttataacaacccagaacgtgcc
gttgaatatctatattctggcattccagttacagcggaggttgctgttccagcaggtggt
caaggggcaaacacaaccgagccatcttctactactagggaagccagtctttctggaatc
ccaaacacctccccattaaatctgttccctcagcaggggggtcccaatgatggaggtggt
gctggtggtggaacacttgagttccttagacataaccaacagtttcaggcgcttcgggaa
atggttcatactaacccacaaatattgcagcctatgctccaggaacttagcaagcagaat
cctcaacttttgaggttgattcaggagaatcatgatgagttccttcagttaataaatgag
ccctttgatggtgctgatggggacttcttagaccaacctgaccaggatgagatgcctcat
gctatcaatgtcacacctgaggagcaagaggctattgggcggcttgaagccatgggattt
gacagagcacgtgtcattgaggcattctttgcctgtgacaggaacgagcaacttgctgta
aattatcttcttgagcatgctgctgatgaagattag
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