Oceanobacillus sp. 143: CV093_00035
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Entry
CV093_00035 CDS
T06339
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
ocb
Oceanobacillus sp. 143
Brite
KEGG Orthology (KO) [BR:
ocb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ocb03032
]
CV093_00035 (gyrA)
03400 DNA repair and recombination proteins [BR:
ocb03400
]
CV093_00035 (gyrA)
Enzymes [BR:
ocb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CV093_00035 (gyrA)
DNA replication proteins [BR:
ocb03032
]
Prokaryotic type
DNA Topoisomerases
CV093_00035 (gyrA)
DNA repair and recombination proteins [BR:
ocb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CV093_00035 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
NTase_sub_bind
Motif
Other DBs
NCBI-ProteinID:
QGS67739
LinkDB
All DBs
Position
7882..10389
Genome browser
AA seq
835 aa
AA seq
DB search
MAEEERQSVQEINISKEMRTSFLDYSMSVIVSRALPDVRDGMKPVHRRILYAMNDLGMHS
DKAHKKSARIVGEVIGKYHPHGDSAVYETMVRMAQDFSYRYMLVDGHGNFGSVDGDSAAA
MRYTEARMSKIAMELVRDINKETIDYRDNYDGSEREPIVFPARFPNLLVNGTSGIAVGMA
TNIPPHNLGETIDAVLAVSKDPEITVDELMEGYIPGPDFPTAGTIIGRSGIRKAYETGKG
SITIRAKVEIEEHANGKSTILVTELPYQVNKARLIEKIAELVRDKRIEGITDLRDESDRN
GMRVVMELRRDANANVVLNNLYKYTSMQTTFGINMLALVDGRPKVLTIKQCLVHYLDHQK
VIIRRRTEFELRKAEARAHILEGLRIALDHLDEVISLIRNSKTTDIARNGLMERFNLSEK
QAQAILDMRLQRLTGLEREKIENEYNELQALISELKAILADEEKLLEIIREELLEIKERF
NDDRRTEIVAGGIGFFEDEDLIPVEDIIVTLTHQGYIKRLPVSTYRTQNRGGRGIQGMGT
NEDDFVEHLLSTSTHDTILFFTNKGKVYKAKGYEVPEFSRTAKGIPIINMLQIEKGEWIN
AVISVNEYREDAYLIFTTKEGITKRTSLSMFANIRKGGIIAVGLREEDELISVKLTDGTK
DIMIATQNGYLIRFEETQIRSMGRTAAGVKGISLRDDDVVVSMEIIETDSKILHVTSNGY
GKQTPEAEYRRINRGGKGVFTSKLNEKTGHVVAVKAVTGDEDLMLITIAGVLIRIPVESI
SETGRSTMGVRLIRLQDGEEVATVAKIEHEEDAEEELVENTDETTDSEVNQDTEE
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggaagaacgccaaagtgttcaagaaataaatattagtaaagaaatgcgtaca
tcttttctcgattattctatgagtgttatcgtctcaagggcattaccggatgtacgtgac
ggcatgaagccagtgcaccgaagaatcttatatgcaatgaatgatttaggaatgcactct
gataaagcacataagaaatcagcacgtattgtcggtgaagtaattggtaagtaccatcca
catggtgattcagcagtttacgagacgatggtacgaatggcacaagattttagttatcga
tatatgcttgttgatggacacggtaacttcggatcagttgacggtgattcagcggcggca
atgcgttatacggaagcaagaatgtcgaagattgccatggagcttgtccgtgatatcaat
aaagaaacaattgattaccgcgataactatgatggttcagaacgggaaccaattgtattc
cctgcccgattccctaatttacttgttaatggaacgtcgggaattgctgttgggatggca
actaacattccaccacataacttaggagaaacaattgatgcagttctagcggtgagtaaa
gatccagagattacggttgatgagctaatggaaggctatattcctggtccggatttccca
actgcgggaactatcatcggtagaagtggcatccgtaaagcatatgaaactggtaaagga
tcgatcacgattcgggctaaagtagaaattgaagagcatgcaaatggcaaatcaacgatt
cttgttacggaattgccttatcaagttaacaaagcgagattaattgaaaaaattgctgag
cttgtacgagacaaacgtattgaaggtattactgatttacgagatgaatcagaccgtaat
gggatgcgtgtcgtgatggagctgcgtcgtgatgctaatgctaatgtcgtgctaaataat
ttgtataaatatacgtcgatgcaaacaacatttggtattaatatgcttgcccttgttgat
ggacgtcctaaggtgctaacaatcaagcaatgtttagtgcattacttagatcatcagaag
gtaattattcgacgtcgtacggaattcgagctcaggaaagctgaagcacgtgcacatatt
ttagaaggattgcgaatagctctcgatcatcttgatgaggtaatttcattaattcgtaat
tcgaaaacaacggatatcgcaagaaatgggttaatggagcgttttaatttatccgagaag
caagcacaagcaatattggatatgcgtctccaacgattaactggtttagagcgtgaaaag
atagaaaatgaatataatgagctacaagcgcttatttcagagttaaaggcgattctagcg
gatgaagagaagctattggaaatcattcgtgaagagctccttgaaattaaggaacgcttc
aatgatgaccgtcgtacagaaattgtcgctggcggcataggattctttgaagatgaagat
ttaattccagtcgaggatattattgttacccttacacatcagggctatattaaacgtctt
ccagtatcgacctatcgtacgcaaaaccgtggtggtcgaggaattcaaggtatggggaca
aatgaggacgacttcgtagagcatttattatcgacttcaacgcatgacacgattctcttc
tttacgaataaagggaaggtttataaggctaaaggatatgaagtacctgaatttagccgt
acagctaagggaatccctattattaatatgctgcaaatcgaaaagggagaatggattaat
gctgtaatttctgtaaatgaatacagagaagatgcatatctcatctttacaactaaagaa
ggaatcacgaagcgtacgtcattatctatgtttgccaatatccgcaaaggtggaattatt
gctgttggcctacgtgaggaagatgagcttatttccgttaagctaactgatggtacgaag
gatattatgattgcaactcagaatggttatctcattcgcttcgaagaaacacaaatccgt
tcaatgggaagaacagctgcaggggtaaaagggatttcattacgcgatgacgatgtcgtt
gtttccatggaaattatcgagactgactcgaaaattctgcatgttactagtaatggatat
ggaaaacaaacaccagaagctgagtatcgccgaattaatcgcggtggtaaaggggtattt
acaagtaaattaaatgagaaaacgggtcatgttgtagcggttaaagctgtaacaggggac
gaagacttaatgctcattacgattgctggtgtgttgattcgtattccagtagaaagtatc
tctgaaactggacgcagcacaatgggtgttcgtttaattcgcttgcaggacggcgaggaa
gtagcaacagttgcgaaaatcgagcatgaagaagatgccgaagaggaactcgttgagaat
acagatgaaacgacagattcagaagtaaatcaagatacagaagaataa
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