Oceanicola sp. D3: FHY55_13040
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Entry
FHY55_13040 CDS
T06139
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
ocd
Oceanicola sp. D3
Brite
KEGG Orthology (KO) [BR:
ocd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocd03400
]
FHY55_13040
Enzymes [BR:
ocd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FHY55_13040
DNA repair and recombination proteins [BR:
ocd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FHY55_13040
Prokaryotic type
FHY55_13040
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QDC10116
UniProt:
A0A5B8BT98
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All DBs
Position
complement(2573587..2574969)
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AA seq
460 aa
AA seq
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MTRITILWHRRDLRLSDLPALTAARKNGPVIPVFIRERKVDALGAAAAWRMGLSVEAHGR
ELEGVGSRLILRSGNALEVLRALVKETGAEAVYWSREYDPVSRERDSEVKAALRDDGVEA
KSFPGKLLWEPWEVKTGQGTPYKVFSPMWKTMKGEEPGEECPRPRELAAPTSWPASETLE
DWQLGAAMQRGADVVARHVVVGEKAAQERLREFVKERMHNYPKGRDLLAERWTSGLSENL
TYGEISPRQCWNAAEGEGSETFRKELAWREFGWQLGFHFPHMFEREWREEWSRFPWKDDE
RAAEVKAWKQGRTGVEVVDAAMRELYVTGTMHNRARMIVASYLTKHMMTDWKVGRDWFAD
TLVDWDEASNALGWQWTAGCGPDAAPYFRVFNPASQAEKFDARGQYRARWLGRGEAARSF
FAAVPERWALTPGEDRPSKPVVGLAEGREAALNAYAERDF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcaccattctttggcaccgccgcgacctgcggctttcggacctgcccgcg
ctcaccgccgcccgtaagaatggcccggtgatcccggtgttcatccgcgagcgcaaggtg
gatgcgctgggcgcggcggcggcttggcggatggggctatcggttgaggcgcatgggcgc
gaactggagggcgtgggcagccgtctcattttgcgatctggcaacgcgttggaggtgctg
cgggcgctggtgaaggaaacaggggcagaggccgtctattggagccgcgagtatgacccg
gtgagccgcgagcgcgacagcgaggtgaaggcggcgctgcgtgacgatggggtggaggca
aagagctttcccggcaagctgctctgggagccttgggaggtgaagacagggcaggggacg
ccttacaaggtgttctctccgatgtggaagacgatgaagggcgaagaaccgggcgaagaa
tgcccgcgcccgcgggagctggctgcgccgacgagttggcccgcgagcgaaacactggaa
gactggcagcttggcgcggccatgcagcgcggggccgatgtggtggcgcggcatgtggtt
gtgggtgagaaggcggcacaggagcggctgcgggagttcgtgaaagagcggatgcacaac
taccccaaggggcgcgacctgctggccgaacgctggacctcggggctgagcgaaaacctg
acctacggcgagatctccccgcgacagtgttggaacgcggcggagggcgagggcagcgag
accttccgcaaggagctggcgtggcgcgagttcggctggcagctgggctttcacttccct
cacatgttcgagcgggagtggcgtgaggagtggagccgctttccgtggaaggatgacgag
cgcgccgctgaggtgaaggcgtggaaacaggggcgcaccggggttgaggtggtagatgcg
gcgatgcgcgagctttacgtgaccggtaccatgcacaaccgcgcccggatgatcgtggcc
agctacctcaccaagcatatgatgaccgattggaaggtgggccgggattggtttgccgat
acgctggtggattgggacgaggcctccaacgcgctcgggtggcaatggacggcgggctgc
gggccggatgctgcgccttacttccgggtgttcaacccagccagccaggccgagaagttt
gacgcgcggggccagtatcgcgcgcgctggctgggccggggcgaggcggcccgaagcttt
tttgcagcggtgccggagcgctgggccctgacgccgggagaggacaggccctcaaagccg
gtggtcgggctggccgaaggccgggaggcggcgctgaacgcctatgcggagcgcgatttc
tag
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