Oceanimonas sp. GK1: GU3_15090
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Entry
GU3_15090 CDS
T01667
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
oce
Oceanimonas sp. GK1
Brite
KEGG Orthology (KO) [BR:
oce00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oce03021
]
GU3_15090
Transcription machinery [BR:
oce03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GU3_15090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AEY02771
UniProt:
H2FUV3
LinkDB
All DBs
Position
complement(3294468..3295448)
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AA seq
326 aa
AA seq
DB search
MSQKKHNIHDDAETNTINNTEVEPAEQEIQDAELDAQEEEVLSAPSQRSLDVTQLYLGEI
GFSPLLTAEEEVHYARRALRGDLAARKRMIESNLRLVVKISRRYNNRGLALLDLIEEGNL
GLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRTAREL
AHRLDHEPTADEIADALDKPVEDVSRMLKLNEKISSVDTPIGGDGDKALLDVLADENDKD
PEAETQDDDMHLSLVRWLEELNPKQREVLARRFGLLGYEASTLEDVGREIGLTRERVRQI
QVEALRRLKEILTQQGLNIDTLFHSE
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagccagaaaaaacataacatccacgacgacgcagaaacgaacaccatcaataacacg
gaggttgagcccgccgaacaggagattcaggacgccgagctggacgctcaggaagaggaa
gtgctcagtgcgcccagccagcgcagcctggatgtgacccagttgtatctgggggaaatc
ggtttttctccactgctgactgccgaagaagaagtccattacgcccgtcgcgccctgcgg
ggcgaccttgccgcccgcaaacggatgatcgagtccaacctgcggctggtggttaaaata
tcccgccgttacaacaaccggggcctggctctgctggatcttatcgaagaaggcaacctg
ggcctgatccgcgccgtggagaaattcgatcccgagcggggcttccgcttctccacctat
gcaacctggtggattcgccagaccatagagcgggccatcatgaaccagacccgtaccatt
cgtctgcctattcatgtggtcaaggagctcaatgtctacctgcgcaccgcccgggagctg
gcccatcggctggaccacgagcccacggccgacgagattgccgacgcgctcgacaagccg
gtggaagacgtgtcgcggatgctcaagctgaacgaaaaaatcagctctgtcgataccccc
atcggcggtgacggcgacaaggcgctgctcgatgtgctggccgatgaaaacgacaaggat
ccggaagccgagacccaggacgacgacatgcacctgagcctggtgcgctggttggaagag
ctgaaccccaagcagcgggaagtgctggcgcggcgttttgggctgctgggttatgaggct
tccaccctggaagacgtgggccgggaaatcggcctgacccgggagcgggtgcgccagatc
caggtggaagccctgcgccggctgaaggaaatcctcacccagcagggccttaatatcgat
accctgttccacagcgagtaa
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