Afipia carboxidovorans OM5 (Goettingen): OCA5_c06230
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Entry
OCA5_c06230 CDS
T01617
Name
(GenBank) ABC transporter, substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
ocg
Afipia carboxidovorans OM5 (Goettingen)
Pathway
ocg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ocg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OCA5_c06230
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ocg02000
]
OCA5_c06230
Transporters [BR:
ocg02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
OCA5_c06230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AEI05346
UniProt:
B6JJM4
LinkDB
All DBs
Position
651724..653238
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AA seq
504 aa
AA seq
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MSAFHKWMACLGLAAMTLAPLSASAGPDGRVVVAQGVYPVSFDPHRDVTVPTINVNANIY
DALLARDSDLKIVPALAESQNRISDTVLELKLRKNVKFHNGDAFSAKDVKFSLDRVLNKE
ERSPQRGWINTVSSVDVVDDYTVRLTTSVPDPVLPARLTLINIVSKAYFDKVGLEGIAAN
PVGTGAYKVGKWVRGDFLDLDANENYWGGAPTVKKAQFRAIPDVAARIAALQAKNVDIIT
NLPPDYIAAIKKASDLQVATVPSARVLFFGLVNTVPGPLQDQRVRQAINHAVNVDEIVKS
LLLGNGIRAGDVNGHILRLLGVDFKSKLYDYNPKKAKQLLAEAGFPNGFSIDMDTPNGRY
LMDRVISQIVAAQLGEVGIKVNLKVHEWGNYAQMFTTHKVSPMYMLGWALPSMDPDQWAT
PQFGAGEPVSNFDDKEIQALVVEARQEMDPDKRNKLYEKLNNMIHDKAAWLFLHQQIDLY
GVNAKLDWKPRADESLRLADIKLR
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcttttcataagtggatggcctgtttgggcctcgctgccatgacgctcgcgccg
ctcagcgcttcggccggtccggacggccgcgtcgtcgtggcgcagggcgtctatccggtg
agcttcgatcctcaccgcgacgtcaccgttccgaccatcaacgtcaatgccaacatctat
gatgcgctccttgcgcgcgattccgatctgaagatcgtgcctgcgcttgccgaatcgcag
aatcgtatcagcgatacggtgctcgagctgaagcttcgcaagaacgtgaaatttcacaat
ggcgatgcgttcagcgcgaaggatgtcaagttctcgctcgatcgcgtgctcaacaaggaa
gagcgctcgccgcagcgcggctggatcaacacggtgtcgtccgtcgatgtcgtcgacgat
tacaccgtccggctgacgacgtcggtgccggacccggtgctgcccgcgcgtctcacgctc
atcaacatcgtctcgaaagcttacttcgataaggtcggccttgaaggcattgccgccaac
ccggtgggcaccggtgcttacaaggtcggcaagtgggtgcgtggcgatttccttgatctc
gatgccaacgagaattactggggcggcgcgccgacggtgaagaaggcgcagttccgcgcc
attcctgacgtcgcggcccgcatcgccgcgctgcaggcgaagaacgtcgacatcatcacc
aacctgccgccggactacatcgccgcgataaagaaggcctccgaccttcaggtggcgacc
gtcccgagcgcgcgtgtgctgttcttcggtctggtgaacaccgttcccggaccgctgcag
gaccagcgcgtccgtcaggcgatcaaccacgccgtcaatgtcgatgaaatcgtcaagagc
ctgctgctcggcaacggcattcgtgcgggcgacgtcaacggccatattcttcggctgctc
ggtgtggacttcaagtcgaagctttatgactataacccgaagaaggccaagcaactgctc
gcggaagccggcttcccgaacggcttttccatcgacatggacacgccgaacggccgttac
ctgatggaccgcgtcatctcgcagatcgttgctgcccagctcggcgaggtcggcatcaag
gtcaatctgaaggtccatgagtggggcaactacgcccagatgttcacgacgcataaggtg
tcgccgatgtacatgctgggctgggcgcttcccagcatggaccccgatcagtgggcgacc
ccgcagtttggcgcaggcgagccggtgtcgaatttcgacgacaaggaaatccaggctctt
gttgtcgaagcgcgtcaggaaatggatcccgacaagcgcaacaagctctacgagaagctg
aacaacatgatccacgacaaggcggcctggctgttcctgcatcagcagatcgacctttat
ggcgtgaacgccaagctggattggaagccgcgcgctgacgaaagtctgcggcttgccgac
atcaagcttcgctga
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