Afipia carboxidovorans OM4: OCA4_c31630
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Entry
OCA4_c31630 CDS
T01967
Name
(GenBank) GGDEF/EAL domain protein
Organism
oco
Afipia carboxidovorans OM4
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_7
PAS_8
PAS
PAS_4
Motif
Other DBs
NCBI-ProteinID:
AEI04263
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Position
3344569..3346860
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AA seq
763 aa
AA seq
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MRRGFSTDDQRALPVDIYASSVDALYADSRSLYAGTISAAAAAAVTAWKAAQWPFLACSL
LLALIGWARVRDMAAYSRQKPSADNYVETRRWEKRYILGSGAFVAILSFWCFLTFALTSD
PAVHLISFSVSLAYLVGVTGRNFSSDQLVTTQTVCAGLPMTAGLIIQNDIYYAFLASLLI
PFFLSLRFISTRLRKTLFDAVVASREIQLLAKRFDTALNNMPHGLCMFDANRRLLVTNHR
FIEMLGLGSNLNGNLCIRELLQHITASNQLRHLSPDEFASQFEERIASRQRQTLALEVDA
NKTFELTFQPMENGGHVVLSEDITERQQTAERIEHLARYDALTGLPNRTHLEDEFERLTA
QGMQSCALLFIDLDQFKKVNDTLGHPAGDALLCQVANRLRRILNTTGIVARFGGDEFVVL
LPIQHSRDEAAQLAGHIIRTLSEIYDVNGHQIMVGASVGVGVMPEDGRTFEQILKCADMA
MYHAKADGRGTYSFFEHTMDEKAQTRRALELDIRNAMTRNEFDIYFQPIMDIKTGRTVTC
EALLRWPHTERGMVPPNEFVSVVEEMGLITELGTWVLHKACSECTTWPKNIGVAVNVSAI
QFRRSNVSELIAECLASTGLSADRLEIEITESVLLENTAEIQKALNDIRKQGVRISLDDF
GTGYSSLSYLREFPLSKIKIDRSFLAGIENDPRSMKLLYGIARVSADLGMSVVVEGVETH
RQLTLLLQEPSITQVQGYLFSGAIGGVDTHKRLKDERALECIA
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcgggttttcgacagatgatcaaagggctcttccggtcgacatttatgcttcg
tccgtagacgcgctttatgccgactcccgctcgctttacgcgggcacgatcagcgccgcg
gccgccgcggccgtgaccgcatggaaagccgcccagtggccgtttctggcatgctctctg
ctgctggccttgatcggctgggcgcgggtgcgggacatggctgcctattcgcgccaaaag
cccagcgcagacaattacgttgagacccgccgctgggagaagcgctacatcctcggctcc
ggcgcgttcgtcgcgattctcagtttctggtgctttcttaccttcgcgctgacatccgac
ccagcggtccatctcatcagcttctcggtcagcctcgcctatctcgtgggcgtgaccggg
cggaatttctcaagcgaccagcttgtgaccacccagacggtttgcgccggcctgccgatg
accgccgggctgatcattcagaacgacatctactatgccttcttggcctctctgctgatt
ccgttctttctgagccttcggttcatctcgacgcgcctgcgcaagacgctgttcgacgcc
gtcgtcgcctcgcgcgagatccaattgctcgccaagcgtttcgatacggcgctgaacaac
atgccccacggcctgtgcatgttcgatgcaaaccggcgcctgcttgtcaccaatcaccgc
tttatcgagatgctggggcttggctccaacctcaacggcaacctttgcatccgcgagctg
ctgcaacacatcaccgcgtcaaatcagttgcggcatctctcgccggacgaattcgcatcc
cagttcgaggagcgcattgcctccaggcagcggcaaacgctcgcgctcgaagtcgacgca
aacaagacgttcgagctaacgttccagccgatggagaatggcggccatgtcgtgctctcg
gaagacatcaccgaacgacagcagacggctgagagaatcgaacacctcgctcgctatgat
gcactgaccggcttgccgaaccgcacccatctcgaggatgagttcgaaagactcaccgca
caaggcatgcagagttgcgccctgcttttcattgacctcgaccaattcaagaaagtgaac
gacacgcttggtcatccggccggagacgctctcctgtgccaggtcgcgaaccgtctgcgt
cgcatcctgaatacgacaggcatcgttgcccgcttcgggggggacgagttcgtcgtgctg
ctgccgattcagcacagtagagatgaagctgcgcagctcgcagggcacatcatccgcacc
ttgagtgagatctatgacgtcaacgggcaccagatcatggtcggtgcgagcgtcggcgtc
ggcgtaatgcccgaagatggcagaacattcgagcagatcctcaaatgcgccgacatggcc
atgtaccacgccaaggccgacgggcgcgggacatactccttcttcgaacacaccatggat
gaaaaggcgcagacgcgccgggcgctcgagctcgacatccgcaacgcgatgacgcgaaac
gagttcgacatctatttccagccgatcatggacatcaaaaccggacggacggtcacttgc
gaagcattgctgcgctggccgcacaccgagcgcggcatggtgccgccgaacgaattcgta
tcagtcgtcgaagaaatgggactcatcaccgagctcggcacctgggtgcttcacaaggct
tgcagtgaatgcacaacgtggccgaagaacatcggcgtcgcggtaaatgtctcggccatt
cagttccggcgcagcaatgtgagtgaactcatcgccgagtgcctcgcgagtacgggactt
tcggccgatcgcctcgagatcgagatcaccgagtcggtgcttctggaaaacaccgccgag
attcagaaggcgctgaacgatatccgcaagcaaggcgttcggatttcactcgatgatttc
ggaacgggttattcgagcctgagctatttgcgggaattcccgctcagcaagatcaagatc
gaccgcagcttccttgccggaatcgaaaacgatccccgctcaatgaagctgctctatggc
atcgcgcgcgtcagtgcggatctcggaatgtccgtcgtcgtggaaggcgtggaaacccat
cggcagctcaccctgctgttgcaggagccaagcatcacgcaggtccagggttatctgttc
tccggcgcgatcggtggcgtcgatacgcacaagcgtcttaaggacgaacgcgcgctcgag
tgcatcgcgtag
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