Ochrobactrum sp. MT180101: HGK82_12400
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Entry
HGK82_12400 CDS
T07147
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ocr
Ochrobactrum sp. MT180101
Pathway
ocr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ocr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HGK82_12400 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ocr03400
]
HGK82_12400 (mutM)
Enzymes [BR:
ocr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HGK82_12400 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HGK82_12400 (mutM)
DNA repair and recombination proteins [BR:
ocr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HGK82_12400 (mutM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF2835
Motif
Other DBs
NCBI-ProteinID:
QOD63561
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All DBs
Position
1:2588762..2589643
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AA seq
293 aa
AA seq
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MPELPEVETVRRGLQPVMEGATVSQVEQRRSDLRFPFPDRFVERLSGRRISALGRRAKYL
TIHLDDGLSVISHLGMSGSFRIETDDDGGTPGEFHHERSKLSAHDHVVFHLLRADGAPAR
IVYNDPRRFGFMLFAEEGTLDSHPLLASLGIEPTGNLLSGTILAELFKGRRTPLKAALLD
QRLIAGLGNIYVCEALWRSQLSPMQTAGSVAQNPAIMEQLAADIRTVIAEAIAAGGSTLK
DYIQADGALGYFQHSFSVYGREGEPCKNPACNGIVERAVQSGRSTFFCASCQQ
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaattgccagaagtcgaaacggttcgccgtggtctgcagcctgtcatggagggc
gcgaccgtcagccaagtcgaacaacgacgctcggacctgcgctttccttttcccgaccgc
tttgtcgaacggctttccggtcggcgcatttcggcgcttggacgtcgcgcgaaatatctg
acgatccatctcgatgacggcctatccgtcatcagccatcttggcatgtcgggttcgttt
cgcatcgagaccgatgatgacggcggcacgcctggcgaattccatcatgagcgctccaag
ctgagtgcgcatgaccatgttgtgtttcatcttctgcgagccgatggcgctccggcccgt
atcgtctacaacgatccgcgtcgcttcggcttcatgctttttgcggaagaaggcacgctc
gatagtcacccgctgctggcaagcctcggcatagagccgacaggcaatctgctctcgggc
accattctggccgaactcttcaaggggcgtcggacgccgctcaaggcggcgctgctcgat
cagcggctgatagctggtcttggtaatatctatgtttgcgaggcgctctggcgcagccaa
ctgtcgcccatgcagacagccgggtctgttgcgcagaatcccgcaatcatggagcaattg
gctgccgatatccgcacagtgatcgcggaagccattgccgcaggcggttcaaccctcaag
gactatattcaggcagatggcgcgcttggctatttccaacactccttctccgtctatggg
cgcgagggcgagccgtgcaaaaaccctgcctgcaacggcattgtggaacgggcggtacag
tcgggacgttcgacttttttctgtgcctcctgccagcaatga
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