KEGG   Ochrobactrum sp. MT180101: HGK82_13355
Entry
HGK82_13355       CDS       T07147                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
ocr  Ochrobactrum sp. MT180101
Brite
KEGG Orthology (KO) [BR:ocr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ocr03400]
    HGK82_13355
Enzymes [BR:ocr01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     HGK82_13355
    5.6.2.6  RNA 3'-5' helicase
     HGK82_13355
DNA repair and recombination proteins [BR:ocr03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    HGK82_13355
SSDB
Motif
Pfam: DEAD_assoc Lhr_WH DEAD Helicase_C ResIII PSD4
Other DBs
NCBI-ProteinID: QOD65948
LinkDB
Position
2:complement(3727..6243)
AA seq 838 aa
MTLNLKPAAASAAFPLPDRFLEWFAAKGWSPRAHQLELLARAEQGQSTLLIAPTGAGKTL
AGFLPALVDLERNGRKKPGMAKRGVHTLYISPLKALAVDIHRNLTVPVEEMGLDITIETR
TGDTPAHKRQRQKLAPPDILLTTPEQLALLIASKGSEQFFKGLRYVVLDELHSLVISKRG
HLLALGLARLRRLQPQLQTIGLSATVAEPDELRRWLVEQDSTGPMAGLVTVDGGAKPEIT
ILDSDERVPWSGHSSRYAIPDIYEAIRQHRTTLLFVNTRSQAEMLFQELWRVNEDTLPIA
LHHGSLDASQRRKVEQAMAANTLRAVVATSTLDLGIDWGDVDLVIHVGAPKGASRLAQRI
GRANHRMDEPSRAILVPANRFEVMECRAALDANYLGAQDTPPLIDGALDVLAQHVLGMAC
AEPFNADQLYREVQSAAPYSNLPRDTFDRILDFVATGGYALKTYERFAKIRKTADGTWRV
SNPRIAQQYRLNIGTIVEAPELNVRLTRGGKGGNARGGRVLGRIEEYFLETLTAGDTFLF
AGKVLRFEGIRENECIASNAAGQDAKIPVYAGGKFPLSTYLAAQVRAMLADRTRWQFLPE
QVREWLEVQQWKSVLPATDELLIETFPRGNRFYMVAYPFEGRLAHQTLGMLLTRRLERMG
AHPLGFVATDYSLGLWGLKDMGALIGTGKLNLTRLFDEDMLGDDLEAWLDESYLLKRTFR
NCAVISGLIERRHPGQEKTGRQVTVSTDLIYDVLRTHEPDHILLQATRADAATGLLDIKR
LGDMLARVKGHLLHKPLDRISPLALPVMLEIGRERVAGDGDEMLLEEAADDLIKEAMQ
NT seq 2517 nt   +upstreamnt  +downstreamnt
gtgacactgaacctgaaacccgccgccgcatctgccgcttttcccttgccggaccgtttt
cttgaatggtttgcggccaagggctggtcgccgcgcgcgcatcagcttgagcttctggcc
cgtgctgaacagggccagtccacgcttctgattgcgcccaccggggcaggtaaaacgctg
gccgggtttctgcctgcattggtggacctggaacgaaatggccgtaaaaagccgggtatg
gcgaagcgcggtgtgcatacgctttatatctcgccgctgaaggctctggccgtcgatatt
catcgcaatctgacggtgccggtcgaggaaatgggtctcgacatcaccatcgagacccgg
accggcgatacgcctgcgcacaaacgccagcggcagaagctggcaccgccggatattctg
ctgaccacgccagagcagcttgcactgttgatcgcatccaaaggttcggaacagttcttc
aagggtctgcgctatgtggtgctggacgaattgcactcgctggtgatttccaagcgcggg
catttgttggcgctggggctggcgcggctgcgccgcctgcaaccgcaattgcagaccatc
ggcctttccgcaacggtggctgagcccgatgaactgcgccgctggttggtggaacaggac
agcaccgggccgatggccggacttgtgacggtcgatggcggcgccaagccggaaatcacc
attctcgattccgacgaacgggtgccatggtcaggccattcgtcacgttatgccattcct
gacatttacgaggcgatccgccagcaccgcacgacgcttttattcgtcaatacgcgtagt
caggcagagatgctgtttcaggagctgtggcgggtcaacgaggacacgctgcccattgcg
ctgcatcacggttcgctcgatgccagccagcgccgcaaggtcgagcaggccatggccgcc
aacacgttgcgggctgtggtcgcgacttcgacgcttgatctggggatcgactggggtgat
gtcgatctagtcattcatgtcggcgcaccgaaaggggccagtcgccttgcgcagcgcatt
ggccgtgccaatcaccgcatggacgagccaagccgcgccattctcgtacccgccaatcgc
ttcgaggtaatggagtgtcgcgccgcactcgacgctaattatctgggtgcgcaggatacg
ccacccttgatcgatggggcgctggatgtgctggcgcaacacgtgcttggcatggcctgt
gccgagccgttcaatgccgatcagctttatcgtgaagtgcagagcgctgcaccttattcg
aaccttccgcgagacacgttcgaccgcattcttgattttgtggcgaccggcggctacgcg
ctcaagacctatgagcggttcgcgaaaatccgcaagaccgcggacggcacgtggcgggtc
tccaatccgcgcatcgcgcagcaatatcggctcaacatcggcacgattgtcgaagcgccg
gagctcaatgtccggcttactcgtggcggcaagggtggaaatgcgcgtggcggacgtgtt
cttggtcgcatcgaagaatacttccttgagacgttgacggctggcgacacgttcctgttt
gccggaaaggtgctgcggtttgaaggcatccgtgaaaacgagtgcatcgcctccaatgct
gccgggcaagatgccaaaattcctgtctatgcaggcggcaagtttccgctttccacctat
cttgccgcgcaggtgcgcgccatgcttgccgaccgcacgcgctggcagtttttgccggaa
caggtgcgggaatggctggaagtgcagcaatggaaatccgtgctgccagcaacggatgag
ctgctgattgaaacttttccgcgcggcaatcgcttctacatggtcgcctatccgttcgag
ggcagactggcgcaccagacgctcggcatgttgctgacgcgccgtctggaacgcatgggc
gcgcatccgcttggctttgtcgctaccgattattcgctggggctttggggcctcaaggat
atgggcgcgctgatcggcacgggaaagctcaatctcacccgtctgtttgacgaggatatg
ctgggggatgatctcgaagcctggcttgatgaaagctaccttttgaaacgcactttccgc
aattgtgccgtgatttcagggcttatcgagcgccgtcatccgggacaggagaaaacgggc
cgtcaggttacggtttccactgacctgatctatgacgtgctgcggacccatgagccggac
cacatattgctgcaggcgacgcgcgcggatgcggcgaccggacttctggatatcaagcgt
cttggcgacatgctggcgcgcgtgaaaggtcatctcctgcacaagccgctcgacaggatt
tcaccgctggcgctgcctgtgatgctcgaaatcggacgcgagcgtgtggcaggcgatggc
gatgaaatgctacttgaagaggccgcagacgacctgatcaaagaggcgatgcaatga

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