Octadecabacter sp. SW4: FTO60_00320
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Entry
FTO60_00320 CDS
T06209
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
oct
Octadecabacter sp. SW4
Pathway
oct03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oct00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FTO60_00320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oct03019
]
FTO60_00320
Messenger RNA biogenesis [BR:
oct03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FTO60_00320
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
QEE34279
UniProt:
A0A5B9EHU1
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Position
complement(68489..68971)
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AA seq
160 aa
AA seq
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MTPDEIARLPYRPCVGVMLVNSAGHAFVGQRNDRDHDAWQMPQGGVDKGENPRDAALREL
WEETGVTADLVQVEAESADWIPYDLPHEIVPKIWKGRYRGQKQKWFLVRFTGTDDQINIA
TQHPEFSRWKWMPPSEMLTSIVPFKRAVYAQVLKEFGGLV
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgacacccgacgagatcgcgcgcctgccttaccgtccctgcgtgggggtgatgttggtg
aacagtgccggacatgcttttgtcggccagcgcaatgaccgcgaccacgatgcctggcag
atgccccagggtggcgtcgacaagggtgaaaacccacgcgacgcggccctgcgcgaattg
tgggaagaaaccggcgtcacggccgatctcgtgcaggtggaggccgaaagcgcagattgg
attccctatgatctgccccacgagatcgtgcccaagatttggaagggccgctatcgtgga
caaaagcaaaagtggttcttggtgcggttcactggaacagatgaccagatcaatatcgca
acgcagcatccggagttttcgcgctggaaatggatgccaccgagcgaaatgttgaccagc
atcgtcccgttcaaaagggcggtttacgcgcaggtcctgaaagaatttggaggtttggta
tga
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