Oryctolagus cuniculus (rabbit): 100338262
Help
Entry
100338262 CDS
T03373
Name
(RefSeq) apoptotic chromatin condensation inducer in the nucleus isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
Nucleocytoplasmic transport
ocu03015
mRNA surveillance pathway
ocu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100338262
09122 Translation
03013 Nucleocytoplasmic transport
100338262
03015 mRNA surveillance pathway
100338262
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100338262
03041 Spliceosome [BR:
ocu03041
]
100338262
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100338262
Spliceosome [BR:
ocu03041
]
Complex C
Other components
EJC/TREX
100338262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
100338262
NCBI-ProteinID:
XP_008267582
Ensembl:
ENSOCUG00000001678
LinkDB
All DBs
Position
17:complement(44186451..44223603)
Genome browser
AA seq
1295 aa
AA seq
DB search
MPEAVGTDPSTSRKMAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKG
ALMLENLQKHSTPHAAFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEE
ASAESEDEMIHPEGVASLLPPDFQSSLERPELELSRHSPRKGSSVSEEKGESDDEKPRKG
ERRSSRVRQARAAKVSECTAEEEDQETPSRNLRVRADRNLKTEEEEEEEEDEEEDEEEED
DDNEGQKPREVPILKQFEEEEGEEMARATPEEVMDERHKTVRSQEQEGLERGGRVTRSQE
EARKSHLARQQQEREMKTASPLEEEEREIKSSQNLEEKSKSPSPPRLTEDLEKAPLVLQP
ELTVSEEETPPPLLTKEASSPPPRAQLQSEEIEPMEGPAPPVLIQLSPPNTDAENRELLV
AQHPVQLVGSLSPLSSPADTKAESPTEKVPEESALPLGQRSTLAQYPTQKALETDSEKSA
QPLPLKIQELTPAKGITEQSVRQLSLEQKEGRRASHPLLLGHRLKQSADSSSSRSSSSSS
SSSRSRSRSPDSSGSPSHSPPRSKQRDVSQAHVHTNPRGRPKMDSRSTSESRSRSRSRSR
SASSNSRKSLSPGVSRDSSTSFMETKDPSSGQEIATPPVPQLQVLEPKERTSASSSSIHV
RHLSQPEPAEKHVTQRLQPERGSPKKCEAEEAEPPAATQPQTSETQTSHLPESGRIQHTV
EEKEEVTMDTSESRPENDVPELPMPIADQVSNDDRPEGSAEDEEKKESSLPKSFKRKISV
VSATKGVPAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEA
VVDLHADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEA
EPPVPPQVSVEVALPPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPP
RGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATR
TALHGVKWPQSNPKFLCADYAEQEELDYHRGLLVDRPSETKAEEQGVPRPLHPPPPPPVQ
PPQHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRK
ERAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAK
EREKRRKEQEEEEQKEREKEAERERTRQLEREKRREHSRERERERERERERDRGDRDRDR
ERDRDRGRERDRRDTKRHSRSRSRSTPVRDRGGRR
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcggagctggaggag
gtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctgaaggccgcactg
gagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaagcggctcaaaggg
gctctaatgctagaaaatttacagaaacactcaacaccccatgctgcattccagccaaat
tcccagattggcgaggaaatgagccagaacagtttcataaagcagtatctggaaaagcag
caggagctacttaggcagcgtctggaacgtgaagctcgagaagctgcagaacttgaagaa
gcttcagctgagtcggaggacgagatgatccatcctgagggagtggcttccctgctgcct
cctgactttcagagcagcttggagagaccagagctggaactcagcagacattcgcccaga
aaaggctcctctgtttctgaagagaaaggtgaatctgatgatgagaaaccaaggaaagga
gaaagacggtcatccagggtgagacaggcaagagctgcaaaagtctctgagtgcactgct
gaggaggaagatcaagaaacaccttctagaaatctgagggttagagcagatcgaaatttg
aaaacagaggaggaagaggaagaagaggaagatgaggaggaagatgaagaagaggaagat
gatgataatgagggacaaaaacctagggaagtaccaatcttaaaacagtttgaggaagaa
gagggggaagagatggccagagcaacaccagaagaggtaatggatgaaagacacaaaact
gtaaggtcccaggaacaggagggtttagagagaggaggaagagttacaagatcccaggaa
gaagccagaaaaagtcatctagccagacagcagcaggaaagagagatgaagacagcgtct
ccccttgaggaagaagaaagagaaataaaatcttcacaaaacttggaggaaaaatccaaa
tcgccttcccctcctcgactgactgaagatctcgagaaagcccctcttgtgctgcagcca
gagctaacagtcagtgaggaggaaactcccccacctttacttaccaaggaagcatcttct
ccaccacctcgtgcacaactccagagtgaagaaatcgagcccatggaaggcccagcaccc
cctgtcctcattcagttatctcctcctaatacagatgctgagaacagggagctgttagta
gctcagcatcctgtccagttggtgggaagcctgtctcctttgtcaagtcctgcagacacc
aaagcagaatctcccacagagaaagtgccagaggagagtgccctgcctctaggtcagagg
agcacactggctcagtacccaacccagaaggctcttgaaactgactcagaaaaatctgct
cagccactccctctaaaaatccaggaattaacaccggccaagggaatcacagagcagtct
gtgaggcagctgtccttggaacagaaggaaggcagaagggcttctcaccctcttctgctg
gggcacagattgaaacagtcagctgattcatcctctagccgctcgtcctcatcttcatcc
tccagttctaggtccagatctcgctctcctgacagttcaggctctccatctcactcacct
ccgaggtccaagcagagagatgtatcccaggcacatgttcacaccaaccctcgtggtaga
cccaagatggactccagatcaacatcagagtcccggtcccggtcccggtcccggtcccgt
tcagcatcaagcaacagcagaaaatcactgagccctggagtctccagggacagcagcacc
agcttcatggaaaccaaagatccctcttctggtcaggagattgcaactccaccagtgcca
caactacaggtccttgagccaaaggagaggacttccgcctcctcatcctctatccatgtg
aggcatctgagccagcctgagccagcggaaaagcatgtgacccagaggttacagcctgag
cgggggagcccaaagaagtgtgaagctgaagaggcagagccaccagctgccacacagccc
cagacctcagagactcagacctctcatctaccagaatcaggaaggattcagcacactgtt
gaggagaaggaggaagtgaccatggacacaagtgagagcagacctgaaaatgacgtcccg
gagcttcctatgcctattgcagaccaagtcagtaatgatgaccgcccagagggcagtgct
gaagatgaggagaagaaagagagctcgctgcccaaatcattcaagaggaagatctccgtt
gtctcagcgaccaagggggtgccagctggaaacagtgacacagaggggggccagcctggt
cggaagcgacgttggggagccagcacagccaccacacagaagaaaccctccatcagtatc
accaccgaatcgctgaagagcctcatccccgacatcaaacccctggcggggcaggaggct
gttgtggatcttcacgcggatgactcccgcatctccgaggatgagacggagcggaatggc
gacgacgggacccacgacaagggactgaagatatgccggactgtcactcaggtagtaccc
gccgagggccaggagaacgggcagcgggaagaagaggaagaggagaaggagcctgaagca
gagccccctgtgcctccgcaggtgtcagtagaggtggccttgcccccgcctgtggagcat
gaagtcaagaaagtgactctaggagacaccttaactcgacgctccattagccagcagaag
tccggagtttccatcactatcgatgacccagtccgaaccgcgcaggtgccctccccgccc
cggggcaagattagtaacattgtgcatatctccaatttggttcgacccttcactctaggc
cagctgaaggaattactgggccgcacaggaaccttggtggaggaggccttctggattgac
aagatcaaatctcactgctttgtcacgtactcaacagtagaggaagcagttgccacccgc
acagctctgcatggggtcaaatggccccagtccaatccgaaattcctttgtgctgactat
gctgagcaagaagagctggattatcaccggggtctcttggtggaccgtccctctgagacc
aaggcagaggagcagggagtaccacggcccctacacccccctcccccacccccagtccag
ccaccacagcacccccgggcagaacagcgggaacaggagcgggcagtgcgggagcagtgg
gcagagcgggaacgagaaatggagcgacgggaacgaactcgatcggagcgtgaatgggat
cgagacaaagttcgggaggggccacgttcccgatcgcggtcccgtgaccgccgccgcaag
gaacgtgcaaaatctaaagagaagaagagtgagaaaaaagagaaggcccaggaggagccg
cctgccaagctactggacgaccttttccgtaagaccaaggcggccccctgcatctattgg
ctcccgctgactgacagtcagatcgttcagaaggaggcagagcgggctgaacgggccaag
gagcgggagaaacggcgaaaggagcaggaagaagaggagcagaaggagcgggagaaggaa
gccgagcgggagcggacccggcagctggagcgggagaagaggcgggagcacagcagggag
agggagcgggagcgcgagcgggagcgggagcgcgacaggggggaccgagaccgagacagg
gagcgggaccgagacagaggccgggagcgggaccgcagagacaccaagcgccacagcaga
agccggagtcggagcacccctgtgcgggaccggggtgggcgccgctag
DBGET
integrated database retrieval system
