Oryctolagus cuniculus (rabbit): 100338262
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Entry
100338262 CDS
T03373
Gene name
ACIN1
Definition
(RefSeq) apoptotic chromatin condensation inducer 1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
RNA transport
ocu03015
mRNA surveillance pathway
ocu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100338262 (ACIN1)
09122 Translation
03013 RNA transport
100338262 (ACIN1)
03015 mRNA surveillance pathway
100338262 (ACIN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100338262 (ACIN1)
03041 Spliceosome [BR:
ocu03041
]
100338262 (ACIN1)
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100338262 (ACIN1)
Spliceosome [BR:
ocu03041
]
Complex C
Other components
EJC/TREX
100338262 (ACIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RSB_motif
SAP
RRM_1
Motif
Other DBs
NCBI-GeneID:
100338262
NCBI-ProteinID:
XP_008267582
Ensembl:
ENSOCUG00000001678
LinkDB
All DBs
Position
17
AA seq
1295 aa
AA seq
DB search
MPEAVGTDPSTSRKMAELEEVTLDGKPLQALRVTDLKAALEQRGLAKSGQKSALVKRLKG
ALMLENLQKHSTPHAAFQPNSQIGEEMSQNSFIKQYLEKQQELLRQRLEREAREAAELEE
ASAESEDEMIHPEGVASLLPPDFQSSLERPELELSRHSPRKGSSVSEEKGESDDEKPRKG
ERRSSRVRQARAAKVSECTAEEEDQETPSRNLRVRADRNLKTEEEEEEEEDEEEDEEEED
DDNEGQKPREVPILKQFEEEEGEEMARATPEEVMDERHKTVRSQEQEGLERGGRVTRSQE
EARKSHLARQQQEREMKTASPLEEEEREIKSSQNLEEKSKSPSPPRLTEDLEKAPLVLQP
ELTVSEEETPPPLLTKEASSPPPRAQLQSEEIEPMEGPAPPVLIQLSPPNTDAENRELLV
AQHPVQLVGSLSPLSSPADTKAESPTEKVPEESALPLGQRSTLAQYPTQKALETDSEKSA
QPLPLKIQELTPAKGITEQSVRQLSLEQKEGRRASHPLLLGHRLKQSADSSSSRSSSSSS
SSSRSRSRSPDSSGSPSHSPPRSKQRDVSQAHVHTNPRGRPKMDSRSTSESRSRSRSRSR
SASSNSRKSLSPGVSRDSSTSFMETKDPSSGQEIATPPVPQLQVLEPKERTSASSSSIHV
RHLSQPEPAEKHVTQRLQPERGSPKKCEAEEAEPPAATQPQTSETQTSHLPESGRIQHTV
EEKEEVTMDTSESRPENDVPELPMPIADQVSNDDRPEGSAEDEEKKESSLPKSFKRKISV
VSATKGVPAGNSDTEGGQPGRKRRWGASTATTQKKPSISITTESLKSLIPDIKPLAGQEA
VVDLHADDSRISEDETERNGDDGTHDKGLKICRTVTQVVPAEGQENGQREEEEEEKEPEA
EPPVPPQVSVEVALPPPVEHEVKKVTLGDTLTRRSISQQKSGVSITIDDPVRTAQVPSPP
RGKISNIVHISNLVRPFTLGQLKELLGRTGTLVEEAFWIDKIKSHCFVTYSTVEEAVATR
TALHGVKWPQSNPKFLCADYAEQEELDYHRGLLVDRPSETKAEEQGVPRPLHPPPPPPVQ
PPQHPRAEQREQERAVREQWAEREREMERRERTRSEREWDRDKVREGPRSRSRSRDRRRK
ERAKSKEKKSEKKEKAQEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAK
EREKRRKEQEEEEQKEREKEAERERTRQLEREKRREHSRERERERERERERDRGDRDRDR
ERDRDRGRERDRRDTKRHSRSRSRSTPVRDRGGRR
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaagccgtcgggacggacccgagtacctcacgcaagatggcggagctggaggag
gtgactctggacgggaagcctcttcaggcgctgcgggtgaccgacctgaaggccgcactg
gagcagcgaggcctagccaagagcgggcagaagagtgccctggtcaagcggctcaaaggg
gctctaatgctagaaaatttacagaaacactcaacaccccatgctgcattccagccaaat
tcccagattggcgaggaaatgagccagaacagtttcataaagcagtatctggaaaagcag
caggagctacttaggcagcgtctggaacgtgaagctcgagaagctgcagaacttgaagaa
gcttcagctgagtcggaggacgagatgatccatcctgagggagtggcttccctgctgcct
cctgactttcagagcagcttggagagaccagagctggaactcagcagacattcgcccaga
aaaggctcctctgtttctgaagagaaaggtgaatctgatgatgagaaaccaaggaaagga
gaaagacggtcatccagggtgagacaggcaagagctgcaaaagtctctgagtgcactgct
gaggaggaagatcaagaaacaccttctagaaatctgagggttagagcagatcgaaatttg
aaaacagaggaggaagaggaagaagaggaagatgaggaggaagatgaagaagaggaagat
gatgataatgagggacaaaaacctagggaagtaccaatcttaaaacagtttgaggaagaa
gagggggaagagatggccagagcaacaccagaagaggtaatggatgaaagacacaaaact
gtaaggtcccaggaacaggagggtttagagagaggaggaagagttacaagatcccaggaa
gaagccagaaaaagtcatctagccagacagcagcaggaaagagagatgaagacagcgtct
ccccttgaggaagaagaaagagaaataaaatcttcacaaaacttggaggaaaaatccaaa
tcgccttcccctcctcgactgactgaagatctcgagaaagcccctcttgtgctgcagcca
gagctaacagtcagtgaggaggaaactcccccacctttacttaccaaggaagcatcttct
ccaccacctcgtgcacaactccagagtgaagaaatcgagcccatggaaggcccagcaccc
cctgtcctcattcagttatctcctcctaatacagatgctgagaacagggagctgttagta
gctcagcatcctgtccagttggtgggaagcctgtctcctttgtcaagtcctgcagacacc
aaagcagaatctcccacagagaaagtgccagaggagagtgccctgcctctaggtcagagg
agcacactggctcagtacccaacccagaaggctcttgaaactgactcagaaaaatctgct
cagccactccctctaaaaatccaggaattaacaccggccaagggaatcacagagcagtct
gtgaggcagctgtccttggaacagaaggaaggcagaagggcttctcaccctcttctgctg
gggcacagattgaaacagtcagctgattcatcctctagccgctcgtcctcatcttcatcc
tccagttctaggtccagatctcgctctcctgacagttcaggctctccatctcactcacct
ccgaggtccaagcagagagatgtatcccaggcacatgttcacaccaaccctcgtggtaga
cccaagatggactccagatcaacatcagagtcccggtcccggtcccggtcccggtcccgt
tcagcatcaagcaacagcagaaaatcactgagccctggagtctccagggacagcagcacc
agcttcatggaaaccaaagatccctcttctggtcaggagattgcaactccaccagtgcca
caactacaggtccttgagccaaaggagaggacttccgcctcctcatcctctatccatgtg
aggcatctgagccagcctgagccagcggaaaagcatgtgacccagaggttacagcctgag
cgggggagcccaaagaagtgtgaagctgaagaggcagagccaccagctgccacacagccc
cagacctcagagactcagacctctcatctaccagaatcaggaaggattcagcacactgtt
gaggagaaggaggaagtgaccatggacacaagtgagagcagacctgaaaatgacgtcccg
gagcttcctatgcctattgcagaccaagtcagtaatgatgaccgcccagagggcagtgct
gaagatgaggagaagaaagagagctcgctgcccaaatcattcaagaggaagatctccgtt
gtctcagcgaccaagggggtgccagctggaaacagtgacacagaggggggccagcctggt
cggaagcgacgttggggagccagcacagccaccacacagaagaaaccctccatcagtatc
accaccgaatcgctgaagagcctcatccccgacatcaaacccctggcggggcaggaggct
gttgtggatcttcacgcggatgactcccgcatctccgaggatgagacggagcggaatggc
gacgacgggacccacgacaagggactgaagatatgccggactgtcactcaggtagtaccc
gccgagggccaggagaacgggcagcgggaagaagaggaagaggagaaggagcctgaagca
gagccccctgtgcctccgcaggtgtcagtagaggtggccttgcccccgcctgtggagcat
gaagtcaagaaagtgactctaggagacaccttaactcgacgctccattagccagcagaag
tccggagtttccatcactatcgatgacccagtccgaaccgcgcaggtgccctccccgccc
cggggcaagattagtaacattgtgcatatctccaatttggttcgacccttcactctaggc
cagctgaaggaattactgggccgcacaggaaccttggtggaggaggccttctggattgac
aagatcaaatctcactgctttgtcacgtactcaacagtagaggaagcagttgccacccgc
acagctctgcatggggtcaaatggccccagtccaatccgaaattcctttgtgctgactat
gctgagcaagaagagctggattatcaccggggtctcttggtggaccgtccctctgagacc
aaggcagaggagcagggagtaccacggcccctacacccccctcccccacccccagtccag
ccaccacagcacccccgggcagaacagcgggaacaggagcgggcagtgcgggagcagtgg
gcagagcgggaacgagaaatggagcgacgggaacgaactcgatcggagcgtgaatgggat
cgagacaaagttcgggaggggccacgttcccgatcgcggtcccgtgaccgccgccgcaag
gaacgtgcaaaatctaaagagaagaagagtgagaaaaaagagaaggcccaggaggagccg
cctgccaagctactggacgaccttttccgtaagaccaaggcggccccctgcatctattgg
ctcccgctgactgacagtcagatcgttcagaaggaggcagagcgggctgaacgggccaag
gagcgggagaaacggcgaaaggagcaggaagaagaggagcagaaggagcgggagaaggaa
gccgagcgggagcggacccggcagctggagcgggagaagaggcgggagcacagcagggag
agggagcgggagcgcgagcgggagcgggagcgcgacaggggggaccgagaccgagacagg
gagcgggaccgagacagaggccgggagcgggaccgcagagacaccaagcgccacagcaga
agccggagtcggagcacccctgtgcgggaccggggtgggcgccgctag
DBGET
integrated database retrieval system
