Oryctolagus cuniculus (rabbit): 100344550
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Entry
100344550 CDS
T03373
Definition
(RefSeq) protein mago nashi homolog
KO
K12877
protein mago nashi
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
RNA transport
ocu03015
mRNA surveillance pathway
ocu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100344550
09122 Translation
03013 RNA transport
100344550
03015 mRNA surveillance pathway
100344550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100344550
03041 Spliceosome [BR:
ocu03041
]
100344550
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100344550
Spliceosome [BR:
ocu03041
]
Complex C
Other components
EJC/TREX
100344550
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
100344550
NCBI-ProteinID:
XP_017196279
LinkDB
All DBs
Position
2
AA seq
82 aa
AA seq
DB search
MIRKEAYVHQSVMEELKRIIDDSEITKEDYALWSSLDRVGQQEFEIVIGDKHISFTTSKM
DCLTDINQSKDPEDLLVFYYLL
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atgatcagaaaagaagcttatgtacaccagagtgtaatggaagaactgaagaggattatt
gatgatagtgaaattacaaaagaagactatgctctgtggtcttcccttgacagggttggc
caacaggagtttgaaattgtaattggggataaacatatttcttttacaacatcaaaaatg
gattgtcttactgatataaaccagtcaaaggatcctgaagacctcctagtattttactat
ttgttatag
Oryctolagus cuniculus (rabbit): 100344696
Help
Entry
100344696 CDS
T03373
Gene name
MAGOHB
Definition
(RefSeq) mago homolog B, exon junction complex core component
KO
K12877
protein mago nashi
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
RNA transport
ocu03015
mRNA surveillance pathway
ocu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100344696 (MAGOHB)
09122 Translation
03013 RNA transport
100344696 (MAGOHB)
03015 mRNA surveillance pathway
100344696 (MAGOHB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100344696 (MAGOHB)
03041 Spliceosome [BR:
ocu03041
]
100344696 (MAGOHB)
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100344696 (MAGOHB)
Spliceosome [BR:
ocu03041
]
Complex C
Other components
EJC/TREX
100344696 (MAGOHB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
100344696
NCBI-ProteinID:
XP_002722203
LinkDB
All DBs
Position
Un
AA seq
178 aa
AA seq
DB search
MTHLACADDVTAGRREARWPGFGRACLGAKMSMASDFYLRYYVGHKGKFGHEFLEFEFRP
DGKLRYANNSNYKNDVMIRKEAYVHKSVMEELKRIIDDSEITKEDDALWPPPDRVGRQEL
EIVIGDEHISFTTSKIGSLIDVNQSKDPEGLRVFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgacgcacttagcctgcgcggatgacgtcactgccgggcgccgggaggcacgttggccg
ggctttgggcgggcttgtctgggagcaaagatgtctatggctagtgatttctacctgcgc
tactatgtagggcacaaaggcaagtttggacacgagtttctggagttcgagtttcggccg
gacggaaagcttagatatgccaataatagtaattacaaaaatgatgtcatgatcagaaaa
gaggcttacgtgcacaagagtgtaatggaagaactgaagaggattattgatgacagtgaa
attacaaaagaagatgatgccttatggcctccccctgacagggttggccgacaggagctt
gaaattgttattggtgatgaacacatttcttttacaacatcaaaaataggttctcttatt
gatgtaaatcagtcaaaggatcctgaaggccttcgtgtgttttactatttggtacaggat
ctgaaatgtttagttttcagtctcattggattacacttcaagattaaaccaatttaa
Oryctolagus cuniculus (rabbit): 100354873
Help
Entry
100354873 CDS
T03373
Gene name
MAGOH
Definition
(RefSeq) mago homolog, exon junction complex core component
KO
K12877
protein mago nashi
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
RNA transport
ocu03015
mRNA surveillance pathway
ocu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100354873 (MAGOH)
09122 Translation
03013 RNA transport
100354873 (MAGOH)
03015 mRNA surveillance pathway
100354873 (MAGOH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100354873 (MAGOH)
03041 Spliceosome [BR:
ocu03041
]
100354873 (MAGOH)
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100354873 (MAGOH)
Spliceosome [BR:
ocu03041
]
Complex C
Other components
EJC/TREX
100354873 (MAGOH)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Mago_nashi
Motif
Other DBs
NCBI-GeneID:
100354873
NCBI-ProteinID:
XP_002715134
Ensembl:
ENSOCUG00000001880
UniProt:
G1SGB7
LinkDB
All DBs
Position
13
AA seq
146 aa
AA seq
DB search
MESDFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDVMIRKEAYVHKSVMEEL
KRIIDDSEITKEDDALWPPPDRVGRQELEIVIGDEHISFTTSKIGSLIDVNQSKDPEGLR
VFYYLVQDLKCLVFSLIGLHFKIKPI
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atggagagtgacttttacctgcgctactacgtgggtcacaagggcaagttcggccacgag
ttcctggagtttgagttccgacctgacgggaaattgagatacgccaacaacagtaattac
aaaaatgatgtcatgatcagaaaagaggcttatgtacataaaagtgtgatggaggaactg
aagagaataattgatgacagtgaaattaccaaagaagatgatgctttgtggcctcctcct
gaccgagtgggccggcaggagcttgaaatcgttattggtgatgaacacatttctttcaca
acatcgaaaattggttcccttattgatgtcaatcagtccaaggacccagaaggcttacga
gtattttattatcttgtccaggacctgaagtgtttggtcttcagtcttattggattacac
ttcaagattaaaccaatctag
DBGET
integrated database retrieval system
