Oryctolagus cuniculus (rabbit): 100344881
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Entry
100344881 CDS
T03373
Gene name
RNPS1
Definition
(RefSeq) RNA binding protein with serine rich domain 1
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03013
RNA transport
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03013 RNA transport
100344881 (RNPS1)
03015 mRNA surveillance pathway
100344881 (RNPS1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100344881 (RNPS1)
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100344881 (RNPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_7
Nup35_RRM_2
RRM_occluded
Macoilin
LAP1C
Motif
Other DBs
NCBI-GeneID:
100344881
NCBI-ProteinID:
XP_017195076
UniProt:
A0A5F9DRT1
LinkDB
All DBs
Position
Un
AA seq
305 aa
AA seq
DB search
MDLSGVKKKSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRD
KARKRRSASSGSSSTRSRSSSSSSSGSSTSTGSSSGSSSSSASSRSGSSSSSRSSSSSSS
SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEI
FSTYGKIKMIDMPVDRMHPHLSKGYAYVEFENPDEAEKALKHMDGGQIDGQEITATAVLA
PWPRPPPRRFSPPRRMLPPPPMWRRSPPRMRRRSRSPRRRSPVRRRSRSPGRRRHRSRSS
SNSSR
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggatttatcaggagtgaaaaagaagagcttgctaggagtcaaagaaaataataaaaag
tccagcactagggctccctctcctaccaagcgcaaagaccgctctgacgagaagtccaag
gaccgctccaaagataaaggggccaccaaggagtccagtgagaaggaccgcggccgggac
aaggcgcggaagcggcgcagcgcttccagcggcagcagcagcaccaggtctcgctccagc
tccagctccagctcgggctccagcaccagcacgggctccagcagcggctccagctcctcc
tcggcgtccagccgctccggcagctccagctcctcccgcagctccagctccagcagctcc
tctggctccccgagcccctcccggcgcaggcacgacaacagacggcgctcgcgctccaaa
tccaaaccccctaaaagagatgaaaaggagaggaaaagacggagcccgtcccctaaaccc
accaaagtgcacattgggaggctcaccaggaacgtgaccaaggaccacatcatggagata
ttttccacctatgggaagattaaaatgattgacatgcctgtggacaggatgcacccccac
ctgtccaaaggctacgcctatgtggagtttgagaacccggacgaggccgagaaggcactg
aagcacatggacggaggacagatcgatggccaggagatcaccgctactgctgtgctggcc
ccctggccccggccgccccctcggcggttcagtcctcccaggagaatgctcccaccgcct
cctatgtggcgccggtcacccccgcggatgcggagaaggtctcgctccccgaggcgcagg
tctcccgtgcgccggagatcccgctctcccggccgccgccgccacaggagccgctccagc
tccaactcctcccgataa
DBGET
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