Oryctolagus cuniculus (rabbit): 100354833
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Entry
100354833 CDS
T03373
Gene name
CPSF3
Definition
(RefSeq) cleavage and polyadenylation specific factor 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100354833 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ocu03021
]
100354833 (CPSF3)
03019 Messenger RNA biogenesis [BR:
ocu03019
]
100354833 (CPSF3)
Enzymes [BR:
ocu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.27 Endoribonucleases producing 3'-phosphomonoesters
3.1.27.-
100354833 (CPSF3)
Transcription machinery [BR:
ocu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100354833 (CPSF3)
Messenger RNA biogenesis [BR:
ocu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100354833 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B
Lactamase_B_6
RMMBL
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
100354833
NCBI-ProteinID:
XP_002722528
Ensembl:
ENSOCUG00000003728
UniProt:
G1SKA3
LinkDB
All DBs
Position
Un
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEI
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGALLSVTVDGRTANINLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggagagcgaccagctgctgatccgaccccttggagctggg
caggaagtaggaagatcatgtattattctggagttcaaaggaagaaaaataatgctggac
tgcgggatccaccctggcctggaaggaatggatgctcttccctacatcgacttaatagac
cccgctgagattgatctcctactaattagtcatttccatttggatcactgtggagctttg
ccctggtttctacagaagacaagtttcaaaggaagaacatttatgacgcatgcaacgaaa
gctatttacagatggcttctctcggattatgtgaaagttagtaacatatcagcagatgac
atgctgtatacagagacagacttggaagaaagcatggacaaaattgaaactatcaacttt
catgaagtgaaggaagtggcaggaatcaagttttggtgttaccacgcaggccacgtgctg
ggagccgccatgttcatgatcgagatcgcgggtgtgaagctcttgtacacaggtgacttc
tcaagacaagaagatagacacttaatggcagctgaaattcccaatattaaaccggatatt
cttatcattgaatcgacttacgggacccatatccacgagaagcgtgaagagcgagaagca
agattctgtaacactgtccacgacatcgtgaacagaggaggccgcggtctcattcccgtc
ttcgctctcgggagggctcaggagctcctcctgattctagatgagtactggcagaatcac
ccagagctgcatgacattcccatatactacgcctcatccctggccaagaagtgcatggcc
gtgtaccagacgtacgtcaacgccatgaacgacaagatccgcaaacagatcaacatcaac
aacccctttgtcttcaaacacatcagtaacctcaagagcatggaccactttgacgacatc
ggccccagcgtggtcatggcctcaccgggcatgatgcagagcggcctgtccagagagctc
tttgaaagctggtgcaccgacaagagaaacggcgtcatcatagcaggctactgcgtggaa
ggcacgcttgccaagcatatcatgtctgaacctgaagaaattactaccatgtctggacag
aagctaccattgaaaatgtctgttgattacatttctttctctgctcacacagattaccaa
caaaccagtgaatttattcgtgctttgaaaccgcctcatgtgattttggtccatggagag
cagaatgagatggccaggttgaaagcagccctgattcgagagtatgaggacaacgatgaa
gttcacatagaggtccataatcctcggaacacagaagcagtgaccttaaacttcagagga
gaaaagctagctaaggtcatgggctttttagcagacaaaaagccagaacaaggccagcgg
gtctcaggaatacttgttaaaagaaactttaactatcacatactgtctccgtgtgacctg
tccaattataccgacttggccatgagcactgtgaaacagacccaagctattccatacact
ggcccctttaatttgctctattaccagctacagaaattgacaggtgatgtagaagaaata
gaaattcaagaaaaacctgctctgaaagtgttcaaaaatattactgtaatacaggaacca
ggcatggtggtattagaatggttggcgaacccttctaacgacatgtatgcagacacggtg
acgacggtgatactggaagtccagtccaatcccaagataaggaaaggggcagtacagaag
gtttctaagaaattggaaatgcacgtttatagcaagaggttggagatcatgctgcaggac
atatttggagaagactgtgtcagtgtgaaagacggcgctctcctcagtgtcacggtggac
gggagaacggccaacatcaacttggagactcggacggtggagtgtgaagaggggagcgag
gacgacgagtcgctgcgggagatggtggagctggcggcgcagcggctgtacgaggcgctc
acgcccgtgcactga
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integrated database retrieval system
