Oryctolagus cuniculus (rabbit): 100356568
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Entry
100356568 CDS
T03373
Symbol
COP1
Name
(RefSeq) E3 ubiquitin-protein ligase COP1 isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
ocu
Oryctolagus cuniculus (rabbit)
Pathway
ocu04115
p53 signaling pathway
ocu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ocu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
100356568 (COP1)
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
100356568 (COP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ocu04121
]
100356568 (COP1)
Enzymes [BR:
ocu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100356568 (COP1)
Ubiquitin system [BR:
ocu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100356568 (COP1)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
100356568 (COP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
zf-RING_11
Sina_RING
Motif
Other DBs
NCBI-GeneID:
100356568
NCBI-ProteinID:
XP_008262031
Ensembl:
ENSOCUG00000005463
LinkDB
All DBs
Position
13:complement(3444677..3654411)
Genome browser
AA seq
734 aa
AA seq
DB search
MSSSRQAGSGSAGTSPGSSAASSVTSASSSLASSPSPPAAAAAAAAALGSGGAAQAAGSG
GLGGPARPVLVAAAVSGGGGGGGAVSAGLSRLSCAARPSAGVGGSSSSLGSGSRKRPLLA
PLCNGLLNSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVV
DNIDHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDLLGTDQDNLDLAN
VNLMLELLAQKKKQLEAESHAAQLQILMEFLKVARRNKKEQLEQIQKELSVLEEDIKRVE
EMSGLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYISTLASRR
KRLTAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSKFTRYNSVRPLATLSYASDL
YNGSSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCIS
WSSYHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAK
VKLWSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKG
HRKAVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIAC
GSENNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLI
AANSQGTIKVLELV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcagccgccaggccggctccggctccgcggggacgagccccggctcctcggcg
gcctcctcggtgacttccgcctcctcgtccttagcctcttccccgtcgccccctgccgcg
gcggcggcggcggcggcggcgctggggtccggcggggccgcgcaggccgcgggctcgggc
ggcctcgggggtccggcgcggcctgtgctggtggcggccgccgtgtcgggcggcggcggc
ggcggcggggcggtgtcggcgggcctgtcccggctcagctgcgcggccaggcccagcgcc
ggcgtaggaggcagcagctccagcctcggcagcggcagcaggaagcgacccctgctcgcc
cctctctgcaacgggctcctcaactcctacgaggacaaaagcaacgacttcgtctgcccc
atctgctttgatatgattgaggaagcatacatgacaaaatgtggccacagcttttgctac
aagtgtattcatcagagtttggaggacaataacagatgtcccaagtgtaactatgttgtg
gacaatattgaccatctctatcctaatttcctggtgaatgagctcattctgaaacagaag
caaagatttgaggaaaagaggttcaaattggaccactcagtgagtagtaccaatggccac
aggtggcaaatatttcaagatttgttgggaactgaccaagataaccttgatttggccaat
gtcaacctcatgttggagttattagcacaaaaaaagaaacagttggaagcagaatcacat
gcagcccaactacagatccttatggagtttctcaaggttgcaaggaggaataagaaagag
caactggaacagatccagaaggaactgagtgttttggaagaggatattaaaagagtggaa
gaaatgagcggcttgtactctcctgtcagtgaggacagcactgtgcctcaatttgaagct
ccttctccatcacacagtagtattattgattccacagaatacagccaacctccaggtttc
agtggcagttctcagacaaagaaacagccttggtatatcagcacattagcttcaagacga
aaacgactcactgctcattttgaagacctagagcagtgttatttttctacaaggatgtct
cgtatctcagatgacagtcgaactgcaagccaactggatgaatttcaggaatgcttatcc
aagtttactcgatataattcagtacgacctttggccacgttgtcatatgctagtgatctc
tataatggctccagcatagtctctagtattgaatttgaccgggattgtgactattttgca
attgctggggttacaaagaaaattaaagtctatgaatatggcacagtcatccaggatgca
gtggacattcattaccctgagaatgaaatgacctgcaattccaaaatcagctgtatcagt
tggagtagttaccataagaatctgttagctagcagtgattatgaaggcactgttatccta
tgggatggatttacaggacagaggtcaaaagtctatcaggaacatgagaagcgatgttgg
agtgttgacttcaatttgatggatcctaaactcttggcttcaggttctgatgatgcaaaa
gtgaagctgtggtctaccaatctagataactcagtggcaagcattgaggcaaaggctaat
gtatgctgtgttaaatttagcccctcttccagataccatttggctttcggctgtgcagat
cactgtgtccactactatgatcttcgtaacactaaacaaccaatcatggtattcaaagga
caccgaaaggctgtctcttacgcaaagtttgtgagtggtgaagaaattgtctctgcctca
acagatagccagctaaaactgtggaatgtagggaaaccatactgtctacgttccttcaag
ggtcatatcaatgaaaaaaactttgtaggcctcgcttccaatggagattatatcgcttgt
ggaagtgaaaacaactccctctacctgtactacaaaggactttctaagactttgctaact
tttaagtttgatacagtcaaaagtgttctggacaaagaccggaaagaagatgatacaaat
gaatttgttagcgctgtttgctggagagcattgccagatggggagtccaatgtgctgatt
gctgctaacagtcagggtacaattaaggtgctagagttggtatga
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integrated database retrieval system
