KEGG   Oryctolagus cuniculus (rabbit): 100359123
Entry
100359123         CDS       T03373                                 
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
  KO
K04952  cyclic nucleotide gated channel beta 1
Organism
ocu  Oryctolagus cuniculus (rabbit)
Pathway
ocu04022  cGMP-PKG signaling pathway
ocu04024  cAMP signaling pathway
ocu04740  Olfactory transduction
ocu04744  Phototransduction
Brite
KEGG Orthology (KO) [BR:ocu00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04024 cAMP signaling pathway
    100359123
   04022 cGMP-PKG signaling pathway
    100359123
 09150 Organismal Systems
  09157 Sensory system
   04744 Phototransduction
    100359123
   04740 Olfactory transduction
    100359123
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:ocu04040]
    100359123
Ion channels [BR:ocu04040]
 Voltage-gated cation channels
  Cyclic nucleotide-gated channel (CNG)
   100359123
SSDB
Motif
Pfam: Ion_trans cNMP_binding
Other DBs
NCBI-GeneID: 100359123
NCBI-ProteinID: XP_017197744
Ensembl: ENSOCUG00000010540
LinkDB
Position
5:complement(13939221..14014677)
AA seq 1215 aa
MLGWVQKVLPQPPGTQRTKVEEEEEAEEAEPEPEPEPETAPEEAEPEDQALPPEETPAGP
LEGQEVAAADPSLQETQEAASIPPASLQAQGTGVLAVNSPSGWVLTWLRRGMEKVVPQPA
CSARAAQQEDPDQAGAQILGPCSAGDAGCPDEPSDALRAQDAGPGPWLLRWLEQNLEKVL
PQPPKASETQGWREEPADAAVDPEPPACPLGPEPRMQAQESASLPTPSGPEPQEEPAPEP
QPGFQASSLPPPGDPARLLAWLLHRLEMALPQPVLHQKAGGQEPDSPGTCDVQTISILPG
EQVEPDLVLEEVDPHWEDTQQDSSGSPQGTEEVPAYGEEDSAVEEVPRPLSQIQEEKEEE
EEEEDGEQEEEEEEEEADVLLDSYLVTEADEDPSEVGETQELRESDQELQEEATANSPGV
PGTREHPEVQVEDADTDSHPLIPEEAPPSVPSPSLPSPSLPPPSPAKADTLTVPGSASAA
PRKRLPSPDNEAEELRALSPAESPVVAWLASPTPQDTDAQDRAASAASQNSAIINDRLQE
LVRLFKERTEMVKEKLIDPDVTSEEESPQPSPAKKAPEPAPEAKPAEAQQAEEEHYCDML
CCKFKRRPWKKYQFPQSIDPLTNLMYILWLFFVVLAWNWNCWLIPVRWAFPYQTPANIHL
WLLTDYLCDLIYFLDITVFQMRLQFVKGGDIITDPKEMRNNYLKSRRFKMDVLCLLPLDF
LYLKFGVNPLLRLPRCLKYMAFFEFNDRLEAILSKAYVYRVIRTTAYLLYSLHLNSCLYY
WASAYQGIGSTHWVYDGVGNSYIRCYYFAVKTLITIGGLPDPQTLFEIVFQLLNYFTGVF
AFSVMIGQMRDVVGAATAGQTYYRSCMDSTVKYMNFYKIPRAVQNRVKTWYEYTWHSQGM
LDESELMVQLPDKMRLDLAIDVNYSIVSKVALFQGCDRQMIFDMLKRLRSVVYLPNDYVC
KKGEIGREMYIIQAGQVQVLGGPDGKAVLVTLKAGSVFGEISLLAVGGGNRRTANVVAHG
FTNLFILDKKDLNEILVHYPESQKLLRKKARRMLRSNNKPKEEKSVLILPPRAGTPKLFN
AALAAAGKMGKAGKGGKLAHLRARLKELAALEAAARQQQLLEQAKSSQDAAGGEAGTAAP
DQPVAPSEAAPDLPSAPEPHAPQAPPESPEKPEGGEEEAARPEEPSVQIRTSPGPESGEQ
ILSVEGPEEKKDEAE
NT seq 3648 nt   +upstreamnt  +downstreamnt
atgctgggctgggtccagaaggtgctgccgcagcctccagggactcagaggaccaaggtg
gaggaggaagaggaagcagaggaggcggaaccggaaccggaaccagagcccgagacagcc
cccgaggaggccgagccggaggaccaggccctgccacctgaagagacacctgcagggcca
ttggaggggcaggaagtggctgcagctgacccaagccttcaagagacgcaggaggctgcc
tccattccgcccgcatccctccaggcccagggcacgggggtcctggcagtgaacagtccc
agcggctgggtgctgacgtggctcaggagaggcatggagaaggtggtcccgcagcctgcc
tgcagtgccagggcagcccagcaggaggacccagatcaggctggagcacagatccttggg
ccctgcagcgctggggacgcagggtgcccagatgagcccagcgacgccctcagggcccag
gacgccgggcctgggccgtggctgctcagatggctggagcaaaatctggagaaagtgctg
cctcagccgcccaaagcctccgagacccagggctggagggaggagcctgctgatgctgcc
gtggacccagagcctcccgcatgtcccctggggccagagcccaggatgcaggcccaggag
agcgcctccctgcccacgcccagcggcccggagccccaggaggagccggctccagagccc
cagcctgggttccaggcttcctccctgccgccccccggggaccctgccaggttgttagca
tggctcctgcacaggctggagatggccctgccgcagccagtgctccaccagaaagctggg
ggccaggagcctgactcccctgggacgtgtgacgtgcagaccatcagcatcctccctgga
gagcaagtggagcctgaccttgtcctggaagaggttgacccgcactgggaggacacccag
caggacagcagcggcagcccgcagggcacagaggaggtgccggcttacggagaagaggac
agtgccgtggaggaggtgcccaggccgctgtcccagattcaagaggagaaagaggaggag
gaagaggaagaggatggagagcaggaagaggaggaggaggaagaggaggctgacgtcctg
ctggatagctacttggtgacggaggcagatgaggaccccagtgaagtaggagaaacccag
gagctgagggagtcggaccaggagctgcaggaggaggccacggccaacagcccaggagtg
cccggcacgagagagcaccctgaagtgcaggtggaagatgcggacaccgacagccacccc
ctcatcccggaggaggccccgccctcggtgccatcgccctcgctgccgtcgccctcgctg
cccccgccctcgcccgccaaggccgacaccctcacggtcccaggctctgcctcggcggcc
cccaggaagaggctgccctctccggacaatgaggctgaagagctcagggcgctgtcacct
gccgagtccccggtggtggcctggttggcctctcccaccccacaggacactgatgcccag
gaccgcgcggcctccgccgccagccagaacagcgccatcatcaacgaccggctccaggag
ctggtgaggctcttcaaggagcgcacggagatggtgaaggagaagctcatcgaccctgac
gtcacctccgaggaggagagcccgcagccctccccagccaaaaaggccccggagccggcc
ccagaagccaagcccgcggaggcgcagcaggccgaggaggagcactattgtgacatgctg
tgctgcaagttcaaacgccgcccctggaagaagtaccagtttccccagagcatcgacccg
ctgaccaacctgatgtacatcctgtggctgttcttcgtggtgctggcctggaactggaac
tgctggctgatccccgtgcgctgggccttcccctaccagacgcccgccaacatccacctg
tggctgctgacggattacctgtgcgacctcatctacttcctggacatcacggtgtttcag
atgcgcctgcagtttgtcaaaggcggggacatcattacggacccaaaggagatgaggaac
aactacctgaagtcccgccgctttaagatggacgtgctctgcctcctgcccttggatttc
ctctacttgaagttcggcgtgaaccccctccttcgcttgccccgttgcttaaagtacatg
gccttcttcgagtttaacgaccgcctggaagccatcctcagcaaagcctacgtttacagg
gtcatcaggaccacagcctacctgctctacagcctgcacttgaactcctgtctttactac
tgggcgtccgcctaccagggcattggctccacgcactgggtctatgatggcgtgggaaac
agttacatccgctgctactactttgccgtgaagaccctcatcaccattggcgggctgccc
gacccccagacgctcttcgagattgtcttccagctgctgaattacttcactggggtcttc
gctttctctgtgatgattggacagatgagagacgtggtgggcgccgccacggcggggcag
acctactaccgcagctgcatggacagcacagtgaagtacatgaacttctacaagatcccc
agggccgtgcagaaccgcgtcaagacctggtacgagtacacctggcactcgcaaggcatg
ctggatgagtcagagctgatggtgcagctcccggacaagatgcggctggacctggccatc
gacgtgaactacagcattgtcagcaaggtggcgctctttcagggctgcgaccggcagatg
atcttcgacatgctgaagaggcttcgctccgtcgtctacctgcccaacgactacgtgtgc
aagaagggggagatcggccgtgagatgtacatcatccaggcggggcaggtgcaggtgctg
ggcggcccggatgggaaggctgtcctggtgacactgaaagctggatccgtgtttggagag
ataagcttgctggccgtcgggggcgggaatcggcgcacggccaacgtggtggcccacggg
ttcaccaacctcttcatcctggacaagaaggacctgaatgagatcttggtgcactatccc
gagtctcagaagttgctccggaagaaggccaggcgcatgttgaggagcaacaacaagccc
aaggaggagaagagcgtgctcatcctgcccccccgggcgggcacccccaagctcttcaac
gccgccctggccgcggcgggcaagatgggcaaggcggggaagggcggcaagctcgcccac
ctgcgggcccgcctcaaggagctggctgcgctggaggcggccgccaggcagcagcagctg
ctggagcaggccaagagctcacaagatgccgcggggggagaggcaggtaccgcagccccg
gaccagcccgtggctccctcggaggccgccccggacctgccctcagccccagagccccac
gcaccccaggcgcccccggaatcccccgagaagcccgagggaggtgaagaggaagcggcc
cggccggaggagccatcagtgcagatccgcacgagcccaggcccggagtccggcgagcag
atcctgtccgtggaggggccagaggagaagaaggacgaggcagagtga

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