KEGG   Orrella daihaiensis: DHf2319_11640
Entry
DHf2319_11640     CDS       T08894                                 
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
  KO
K11900  type VI secretion system protein ImpC
Organism
odh  Orrella daihaiensis
Brite
KEGG Orthology (KO) [BR:odh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:odh02044]
    DHf2319_11640 (tssC)
Secretion system [BR:odh02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   DHf2319_11640 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: UOD50076
LinkDB
Position
2471729..2473207
AA seq 492 aa
MSEEAKKEESGGAAASGSLLDELLMTSKVRPGGESYDITKQGIQTFISSLLEPGRITDRV
TAGLADEMIAELDKKLCRQVDEILHNPDFQRLESSWRSLKFLVDRTNFRENIKIEVMNAS
KEDLLSDFEDSPEITKSGLYRNCYTAEYGQFGGQPYGAIVANYEFGPGASDIKLLQNCAA
VSAMSHAPFIAAAGAEFFGLDDFTKLPDLKDLSSIFESPQYTKWQGFRESDDSRNVGLVV
PHFLLRTPYGQNTTPSKKFNYEENVADGHNKFLWGNAAFAFASRLTQSFADYRWCANIIG
PQGGGTVGDLPIYNYEAMGEIQTKIPTEMLISERREFELAEQGFISLAMRKNSDNAAFFS
ANSCQKPKFFGNTKEGKEAETNFKLGTQLPYIFVVSRLAHYIKVLQRENIGTWKERADLE
GELNNWIRQYVADMDAPGPEVRSRRPLRSAQIEVHDVEGDPGWYRVSMRVRPHFKYMGAS
FTLSLVGKLDKS
NT seq 1479 nt   +upstreamnt  +downstreamnt
atgagtgaagaagccaagaaagaagaatcaggtggcgcagcagccagtggatcgctgctt
gacgaactcttgatgaccagcaaggtgcgcccgggtggtgagtcttatgacattaccaag
cagggtattcagacgttcatttcgtcattgcttgagccaggacgcatcactgaccgagtg
accgcaggcttagccgatgaaatgattgccgagctggataaaaagctttgccgtcaggtg
gacgaaattctgcacaacccggatttccagcgtttggagtcgtcctggcgttcgctgaag
tttttggttgaccgcaccaatttccgtgagaacatcaagatcgaggtcatgaacgccagt
aaggaagacttgctaagcgacttcgaagactccccggaaatcaccaagtctggcctctat
cgtaattgctacaccgctgagtacgggcagttcggcggccaaccttacggcgccatcgtg
gccaactacgagtttggtccaggcgcatccgacatcaaactgctacaaaactgcgctgct
gtttccgccatgtcgcatgcaccatttatcgctgctgcaggtgctgaattctttgggtta
gatgactttacgaagttgcctgatcttaaagatctgtcatcaatttttgagagtccgcag
tacacgaagtggcagggtttccgcgaaagcgacgattctcgtaatgttggcttggttgta
ccgcacttcctgttgcgcactccttatggtcagaacaccacgccttcgaagaagttcaac
tacgaagagaacgtcgctgacggtcacaacaaattcctatggggtaacgcagcctttgca
tttgcctcgcgcctgacgcaaagctttgctgactaccgctggtgcgccaacattattggc
ccgcagggcggcggcacggtgggtgacctaccgatctataactatgaagccatgggcgag
atccagaccaagatcccgaccgaaatgctgatttccgagcgccgcgagttcgaattggcc
gagcaaggttttatttcactggccatgcgtaagaacagtgacaacgctgcgttcttctcg
gccaattcctgccaaaagcccaagttctttggcaacaccaaagaaggcaaggaggctgag
accaacttcaagcttggtacacagctgccctacattttcgtggtcagtcgcttggcgcac
tacattaaagtgctacagcgcgagaacatcggtacctggaaggagcgcgctgatctagag
ggcgaactcaataactggatccgtcagtacgtggcagacatggatgctccggggcccgag
gttcgtagccgccgcccgttgcgcagcgcccagatcgaagtacacgatgtcgaaggcgat
ccgggctggtaccgcgtttccatgcgtgtgcgtccacacttcaagtacatgggtgcgtca
ttcacgctctcactcgtgggcaagctcgacaaaagttaa

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