Orrella dioscoreae: ODI_R2217
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Entry
ODI_R2217 CDS
T05133
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
odi
Orrella dioscoreae
Pathway
odi02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
odi00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ODI_R2217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
odi03021
]
ODI_R2217
Transcription machinery [BR:
odi03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ODI_R2217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
MerR
HTH_11
HTH_17
Sigma70_ECF
FaeA
HemY_N
HTH_Tnp_1
GerE
HTH_Tnp_ISL3
HTH_29
HTH_28
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
SOE49637
UniProt:
A0A1C3JXA3
LinkDB
All DBs
Position
I:complement(2397450..2397956)
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AA seq
168 aa
AA seq
DB search
MNSSDYLSPPSVETLYVDHHPWLQGWLRRRLGNAADAADLAQDAFLRLLASPRIFGSLPE
ARVYLRTMAGGLCVDLWRRRQIEQAWLDTLAALPEDRAPSAEHQVMVLQTLQEMDTLLRS
LPAKAAQAFVMSAGCGMSTVEVAQELGVSDRMVRKYIAQAMLHCLKTA
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
ttgaactcctccgactacctttccccgccctccgtcgaaacgctttacgtcgaccaccac
ccctggctgcaaggctggctgcgccgccgcctgggcaacgccgccgacgcggccgacctg
gcccaggacgcgttcctgcggctgctggcatcgcctcggatcttcggcagcctgcccgaa
gcacgggtctatctgcgcacgatggccggcgggctgtgcgtcgacctgtggcggcggcgc
cagatcgagcaggcctggctggataccctggccgcgctgccggaagaccgggcgccatcg
gccgagcatcaggtgatggtgctgcaaaccctgcaggagatggacacgctgctgcgcagc
ctgccggccaaggccgcgcaggccttcgtgatgagcgccggttgcggcatgtccaccgtg
gaagtggcgcaggaactgggcgtatccgaccgcatggtgcgcaagtacatcgcgcaggcc
atgctgcactgcctgaagaccgcgtga
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integrated database retrieval system
