Olea europaea var. sylvestris (wild olive): 111365258
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Entry
111365258 CDS
T05244
Name
(RefSeq) probable small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Pathway
oeu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111365258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oeu03019
]
111365258
03041 Spliceosome [BR:
oeu03041
]
111365258
03032 DNA replication proteins [BR:
oeu03032
]
111365258
Messenger RNA biogenesis [BR:
oeu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
111365258
Spliceosome [BR:
oeu03041
]
Complex A
U1 snRNP components
Sm proteins
111365258
U2 snRNP components
111365258
Complex B
U1 snRNP components
111365258
U4/U6.U5 tri-snRNP components
111365258
Complex C
U2 snRNP components
111365258
DNA replication proteins [BR:
oeu03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
111365258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
111365258
NCBI-ProteinID:
XP_022841468
LinkDB
All DBs
Position
17:14677174..14681033
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AA seq
88 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGFLVSVDSYMNLQLANAEEYIDGQFSGSL
GEILIRCNNVLYLRGVPEDEEIEEADRD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggctactgtaccagttaaccctaagccttttttaaacaatttgactgggaagcctgta
atggtaaagctcaagtggggaatggagtacaaagggtttctcgtctcagttgattcatat
atgaacttgcagcttgcaaatgctgaagaatacattgatggacaattcagtggaagtctt
ggagagatcttgatcagatgtaacaatgtgctttatcttcgtggggtgccagaggatgaa
gaaatagaagaagcagatcgtgactag
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