Olea europaea var. sylvestris (wild olive): 111389064
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Entry
111389064 CDS
T05244
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
oeu
Olea europaea var. sylvestris (wild olive)
Brite
KEGG Orthology (KO) [BR:
oeu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oeu03016
]
111389064
Enzymes [BR:
oeu01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
111389064
Transfer RNA biogenesis [BR:
oeu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
111389064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
111389064
NCBI-ProteinID:
XP_022869688
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All DBs
Position
Unknown
AA seq
659 aa
AA seq
DB search
MSLSSPPTHLKLLTVLSATATLYFLYKSRHRYSRLLTRLRQTLNKPSGQNPNSSFNKGKL
FFISQTNTSKTLAQRLHANLLLNDLDFDLVDPQDYEPEDICKETLVLIVASTWENGGSPE
NGNFLVNWLAESADDFRVGALLLRNCKFAVFGIGSSSYGETFNAVARDISVKLRKLGAAD
LVDLGEGDVDEGNLDEVFERWSERIVGILKGNLGENKALNGNYGVGNESEGEVEFSEEED
EEEDGEGDNGIVDLEDIVGKAPSRKSIVGPKTNGKVENGEVLNGGKEMVTPVIRASLVKQ
GYKIIGSHSGVKLCRWTKSQLRGRGGCYKHSFYGIESHRCMEATPSLACANKCVFCWRHH
TNPVGKSWRWKMDDPIVIVDTAIDLHTKMIKQMKGVPGVKVERLSEGLSPRHCALSLVGE
PIMYPEINSLVDELHRRRISTFLVTNAQFPDRIKMLKPITQLYVSVDAATKDSLKAIDRP
LFGDFWERFVDSLQALKEKQQRTVYRLTLVKGWNTEDVDAYSNLFVIGDPDFIEIKGVTY
CGSSATSKLTMENVPWHSDVKEFSEALAQKSNGVYEVACEHVHSCCVLLANVNKFKVNDQ
WFTWIDYDKFHDLVAAGEPFSSKDYMASTPSWAVYGAEEGGFDPEQSRFKKERHHKSTR
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtccctctcatctccacctacgcacctcaagctcctcaccgtcctctccgccacagcc
actctctacttcctctacaaatctcgccaccgctacagccgcctcctgacgcgcctccgc
caaaccctcaataaaccctccggccaaaaccctaattcgagtttcaacaaaggcaaactt
ttcttcatttctcaaaccaacacttccaaaaccctagcccaacgcctccacgcgaattta
ttgcttaatgacctcgactttgatcttgttgacccccaggattatgaacctgaggatata
tgtaaagaaacattggtcttgattgttgcttctacttgggaaaatggtggatcccctgaa
aatggaaactttttggtaaattggttagccgagagtgctgatgatttcagagtcggggcg
cttctgcttaggaactgtaaatttgcagtttttgggatcgggagtagtagttatggggag
acctttaatgctgtggcgagggacatttctgttaaattacggaagcttggggcagcggat
ttggtggatttgggggagggggacgttgatgaaggtaatttggatgaggtgtttgagagg
tggagtgagagaattgttgggattttgaagggcaatttaggagaaaataaagcccttaat
gggaattatggggttgggaatgaaagtgaaggtgaagttgagtttagtgaggaggaagac
gaggaggaggatggggagggagataatggtattgttgatttagaggatatagtggggaaa
gctccatcacgaaagtcgattgtgggacctaaaactaatggaaaagttgagaatggagaa
gtactgaatggagggaaagaaatggtgaccccagtgattcgggcaagtttagtgaagcag
gggtataaaatcattggttcccatagtggggttaaactttgtagatggaccaagtctcag
cttaggggacgtggaggttgctataagcactcattttatggcatcgagagtcacaggtgc
atggaggcaaccccaagtttagcatgtgcaaacaaatgtgttttttgttggagacatcac
acaaatcctgtagggaaaagctggcggtggaagatggatgatccaatagttattgtcgat
actgccattgatttgcatacgaaaatgataaagcaaatgaaaggagttccaggagtaaaa
gtagagcgattgtcagagggtctttctccaagacattgtgccttgtctcttgttggtgag
cctatcatgtacccagagattaactcacttgtagatgagttgcaccggcggcgaatctcg
acttttctcgtaacaaatgctcagtttcctgataggattaagatgctgaaacctatcacg
cagttgtatgttagtgtagatgctgcaacaaaggatagcttgaaggcaattgatagacca
ctcttcggggacttttgggagcgatttgttgattctttgcaagctctcaaggagaagcag
cagcgaactgtctatcgcttgaccctggttaaaggatggaacacagaggatgtagatgct
tattctaacctctttgttatcggagatcctgattttattgaaattaaaggagttacatat
tgtggatcgtcagcaacttctaaattaacaatggagaatgtaccctggcattctgatgta
aaagaattttcagaagcgttggctcaaaaaagtaatggggtttacgaggttgcttgcgag
catgtgcactcatgttgtgttctactggctaatgtcaacaaatttaaagttaacgatcaa
tggttcacttggatagactatgacaagttccatgacctggtggcggctggagaacctttc
agcagcaaggattatatggcttcgacaccatcatgggcagtgtatggagccgaagaaggt
gggttcgatcctgagcagtcacgttttaagaaagagcgccatcacaaatccacccgctga
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