Oxalobacter formigenes: BRW83_1067
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Entry
BRW83_1067 CDS
T04835
Symbol
rfbB_1
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
ofo
Oxalobacter formigenes
Pathway
ofo00521
Streptomycin biosynthesis
ofo00523
Polyketide sugar unit biosynthesis
ofo00525
Acarbose and validamycin biosynthesis
ofo00541
O-Antigen nucleotide sugar biosynthesis
ofo01100
Metabolic pathways
ofo01110
Biosynthesis of secondary metabolites
ofo01250
Biosynthesis of nucleotide sugars
Module
ofo_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ofo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
BRW83_1067 (rfbB_1)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
BRW83_1067 (rfbB_1)
01055 Biosynthesis of vancomycin group antibiotics
BRW83_1067 (rfbB_1)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
BRW83_1067 (rfbB_1)
00525 Acarbose and validamycin biosynthesis
BRW83_1067 (rfbB_1)
Enzymes [BR:
ofo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
BRW83_1067 (rfbB_1)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Gemini_AL1_M
Motif
Other DBs
NCBI-ProteinID:
ARQ45814
LinkDB
All DBs
Position
1133819..1134838
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AA seq
339 aa
AA seq
DB search
MKSILVTGGAGFIGSNFVPYFAEKYPEYFIINLDKLTYAGNLENLRECETMTNYKFVQGN
ICDEILVQSLFEKYDIRGVIHFAAESHVDNSIKGPKSFMETNFMGTFNLIENARRHWMEA
PNQFKSGYESCRFHHISTDEVYGTLGETGYFSEETPYAPNSPYSASKAGSDFIVRAYHYT
YGMNVTTSNCSNNYGPKQHSEKLIPTIIRKCLAEDPIPVYGKGLNVRDWLYVMDHCCAID
LIFHEGKSGETYNVGGNNERNNLEIVHAVCAILDKYHPCSDGKKYEALISFVTDRPGHDL
RYAIDANKLKNDLGWKANENFDTGIVKTIAWYLNEKKFI
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgattctggtaactggtggcgcaggttttattggttcaaattttgtcccctat
tttgctgaaaaatatcctgaatatttcatcattaatctggacaagctgacgtatgcggga
aacctggaaaatctcagagaatgtgaaaccatgacgaattacaagttcgtccagggtaat
atatgcgacgagatattggttcaatcactgttcgagaaatacgacatccgtggagtcatt
cattttgcagcagaaagccatgttgacaattccattaaagggccgaagtcctttatggaa
accaattttatggggaccttcaatcttattgaaaacgctagaaggcactggatggaggcg
ccaaatcaattcaaaagtgggtatgaatcctgtcgctttcatcatatctcaacagatgaa
gtctatggcactcttggagaaaccgggtatttttccgaagaaacgccttatgcccctaac
agtccatattcagccagtaaagcggggtctgattttattgttcgagcctaccattataca
tatggtatgaatgtgacgacatccaattgttccaataattacgggccgaaacagcatagt
gaaaaattgattccaactatcatcagaaaatgtctggcggaagatccaatacccgtatac
ggaaaaggtttaaatgtgcgtgactggttatatgtcatggatcattgttgtgcgattgat
ctgatttttcatgaaggaaaatcaggcgagacatataatgtcggcggaaataatgaacgt
aataatctggaaatcgttcatgctgtatgtgctattctggacaaataccatccatgcagt
gatgggaagaaatatgaagcgcttatttcattcgtcacagatcgaccggggcatgatttg
cgatatgccatcgatgcaaacaagttgaaaaatgatcttggatggaaagcgaatgaaaat
ttcgacaccggcattgtcaaaacaatagcatggtacttgaatgaaaaaaaatttatctaa
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