Oncorhynchus gorbuscha (pink salmon): 124048539 Help Entry 124048539         CDS       T07892                                  Name (RefSeq) cadherin-23-like isoform X1   KO K06813   cadherin 23 Organism ogo  Oncorhynchus gorbuscha (pink salmon) Brite KEGG Orthology (KO) [BR:ogo00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ogo03037]     124048539    04515 Cell adhesion molecules [BR:ogo04515]     124048539 Cilium and associated proteins [BR:ogo03037]  Primary cilia and associated proteins   USH complex and associated proteins    124048539 Cell adhesion molecules [BR:ogo04515]  Cadherins   Major cadherins    124048539 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Bact_surface_Ig-like Sde0182_C Motif Other DBs NCBI-GeneID:  124048539 NCBI-ProteinID:  XP_046225372 LinkDB All DBs Position LG11:complement(33376586..33925510) Genome browser AA seq 3370 aa AA seqDB search MLWSVGFGGRMTVAKLLLSFFILNSFCEASNQPPRFQNYFFHSYLLIYENTPVGTSVTQL QAEDPDQEPLIFGVVGEEAMRYFAVERDSGVVWLRQPLDREAKSEMQVEFFVSDSQGVVK DTVNIQIGDVNDNSPTFHGQPYTVHIAENTPVGTSVYQVNATDPDQGTGGSVLFSFQPPS SFFSIDGARGTVTVTRALDYETTSAYQLTVNATDQDKKRPLSSLSNLAITITDVQDMDPI FTNLPYSTNIGEDVPPGYEVRKIRAIDQDLGRPRGIGYTIISGNTNSIFALAYISGSLTV NGQLDRENPLYSSGFTLTVKGTELNDDRTPTDASVMTTFTILLIDKNDNAPKFNSSEYRV RITELAQVGFALPLFIQAEDKDEGVNSMFQVFLTGNNSDHFTISPTAVQGRADIRVRVDV PLDYENIQRYSFSLYANESMSEHVGFARIFIDLINENDNRPIFLKSLYNISLPENTPRGT SLLRIQAIDGDFGTFGTVRYYFSDEPEQFSLDPETGWVHLWGNLDYELMRRFTLTVLARD GGGEETTGRLWVNVLDVNDNTPLFQKEAYMGSLRENEQAAQQVARVRATDEDSPPNNFLT YTLTSVSAFRGYFRITMVEGYAVISVNSPLDYEMVPEGMIYLTVMAKDGGNPSLNSSVSL TVELFDENDNPPKFSKPSYLVKIPENIIAGATVVFVNATDLDASREFGQASLIYSLQGSS QFRLNTRSGEITTTALLDRELKSEYILIVRAVDGGVGPLQKTGIATVNITILDINDNSPM WRDEPYHANVVEMSPIDTDVISVLAIDPDVGDNGTVVYSISPENPFYTINSSTGKIRTSG AVLDRERSNPKDILLMRTIIVSAVDLGRPPLRSSVSTTVYVNLLDLNDNDPIFLNLPFVA EVPEGLPSGSSVFKIQVEDPDQEENGMVTMGLLVGMPRVDFYLNTTTGVLYSTATLDREQ ISLYHLRIVAYDQGQNPRTSTSTLTITVLDANDETPTFFPKVYNVSLQESVPRDHVVARL NCSDNDAGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVGLDRETQATYSLVIEAIDNGP AGSRRTGTATVFVEVLDVNDNRPIFLQNSYETSILENVPIGSSILQVQATDSDQGENGRV LYRILSDNSKGLFRINELSGLVMRGQRALDRESSSSHVLEVEAYNSDQGRMRSSVRVIVY VEDANDEAPVFTQQQYNRLGLRETAGIGTSVIVVRATDPDTGDGGAVAYALDSGSDRKFD VDVSTGLVTTVDYLDYETKTSYLMNVSATDQAPPFHRGFCMVYVTLLNELDEAVAFFSAG YEVSLLENIATGTEVVQVQAQSADNLNQLSYRFDPDTSPAALALFKIDSITGRITVTGLL DREKGDLYTLTVVADDGGPKKDSTVKVSITIQDENDNSPEFDITSDSLVEIPENTPIGKR VAVVLGRDKDAGKNGLVYFRLVAGNMQDVFEIRTVNHTYGEIYVNSPLDRESVDRYLLKV RAMDSGVPPRYRDLPLIINILDVNDNTPVIERQVGYNVSISENVGGGTSVLRVVATDRDI GPNAMLFYYITSGNKDLTFRMDRMTGEMVTRPSPPDRERQQEYWLIMMVEDDGTPSLSSS TTIYVRIVDENDNAPEFPEEEYVTVLSEGPNTVGAIIATVTAIDPDEGLNGTLRYAIVHG NLDITFHINHTTGRIVAVKELDFEISNGHYALIVTATDQCPIHALRLTSSTTVMVNVLDV NDVTPTFTKPYEGPFEITEGQPGPRVWTLKAIDQDSGLNGKVEYSITAGDPQNEFVVSPV EGELRVRRDVELDRETTPFYNITVMAKDLGNPPRSSIVVVGVHVLDINDNDPMLLNLPHN ISVREGASIHTLVTTVQARDMDSGRNALLTYNITAGNHDGAFYINDTTGMVQVNRPLDRE RVGEYRLTITVKDNPENPRIARRDSDMLVITVLDDNDNRPIFTQTSYRAEITENSPSGSA VSVLNGPVLAEDKDIGPNAVVRYRLLGTRLDLFTVDSDTGVVRVRQKALLDREAFVEPRV ELLLVGEDVGGLNSSVPLTVTIMDQNDNPPVFNPPSLTVHLPENSPTGVVVTQLSASDAD SGSNAWLLYRLESGAQDRFIVDSLSGAVLVGNSSLDREERGSYRLVVVATDRGTPSLSGT ATLSVILDDVNDSRPRFLEPVTTININESTPPGVVVATLTAKDPDLRPRLEYYIISVEAK DDGNNPVGGLQESFGIDFHTGAVFVRNPLNRELVATFEILVSVHDNASDVIDMSVSVPNA RLIVNVLDVNDNAPRFRPFGVANFSEKILEGAQPGTTLLSVSAVDPDKGPNGQVIYELLH LPRGDYLRLEDPSTGKIVAYRTVDFEQVQWLNFTVRAQDHGSPPKVAELPVYLRIVDVND NNPIFSQPSYQKPVFEDVDLGTVIVRVRATDADSGLFSVIEYSLVDGEGKFGITPSTGDI YILSPLDRETKDHFTLTAIARDNPGGSPNNRRENSVQVLVTVLDVNDFRPRFSERAFETS VFENEPSGTSVITLTATDLDEGQNGLLSYSMQGPGADAFSLDADTGLVRSLRLLQSFEHF NLTVVATDQGRPPLWGTATLRIIIIDVNDNRPMFVRPANGTIMHIMEEQPPGLLVYEVFA TDGDEGVNGEVRYAFLQTGAGNRDWDNFHIDAITGVITTAIKLDREKQALHSLIVVAYDL GQPVPYETTQPLQVALLDIDDNEPVFFKPPRGSLPYQTLSVAEHSTPGTVVGNVTGAVDA DEGSNAVVYFFIAGGDTEGNFGLSPGGVLKVKKDLDREDISVYSIIIKASSHRNWAPARG QRSAWGRALDPSRDPTLQEVRIYLEDINDQPPRFTKLEYTTGVAADAKVGSDLIRVQAID NDVGNNSLVLYHVLSIRYIKLQSNDTEDIGNSFIIGETDGIIRTYDLFTAYDPGYFVVEV LARDLAGHSDIAMVGIYILRDDQRVKIVINEIPERVRQFQEEFINLLSNITGAIVNTDDV QFHVDKKGRVNFAQTDVLIHVVNKHTNRILDVEKVIQMIDENKEQLKNLFRNYNILDVQP AVSGRAPDDLTTLQMAIIILAVLLFLAAMSFIFMNWYYRTVHKRKLKAIVAGSTGKQGLM DILDLPNTNKYSFEGANPVWLDPFCRNLELAAQAEHEDDLPENLSEITDLWNSPVPTHGT FGRKPQAKPEDDRYLRAAIQEYDNIAKLGQIMREGPVKGTLLNVVLDDYLRLKKLFAARL VTKSTIQGDQSSVTELIQSDLDDDEDEQVGMGGSWGTLRFKHKLPVEMRGPDGVHVVHGS MGTLLTSDLNSLPEDNQLALARSMEALNATDRGLYTERNARTESAKSTPLHHNNKVDDTL SQSPLEITEL NT seq 10113 nt NT seq  +upstreamnt  +downstreamnt atgttgtggagtgtgggtttcggtggcaggatgacggtggccaagcttctcctatccttc ttcatcctaaactccttttgcgaagcctccaaccagcctccacgcttccaaaactacttt ttccactcctatcttctcatctacgagaacacaccagtcggcacatcagtaacccaactg caggcggaagacccagaccaggagcccctcattttcggggtagtgggagaggaggccatg aggtactttgcagtggagagagacagtggagtagtgtggctacgacagcccttggaccgc gaggccaagtcggagatgcaggtggagttctttgtgagtgacagccaaggggtggtcaaa gacacagtgaatattcagataggagatgtgaatgacaactctcctactttccatggccag ccatacacagtacacattgcagagaacactccagtgggcacctcagtctaccaggtgaat gccacagacccagaccaaggcacggggggcagtgtgctcttctctttccagcccccctct tcctttttctccatcgatggagcccgtggtacagtcactgtcaccagggctctggattat gagaccacatcggcctaccagctcaccgtcaatgccacggaccaggataagaagcgccct ctgtccagtctatctaatttagccatcaccatcactgatgttcaggacatggaccccatc tttaccaacttaccctacagcaccaacataggggaggacgtcccaccgggctatgaggtg cgcaagataagagccattgaccaggatctggggagaccaagaggcatcggctacaccatc atctcaggcaacaccaacagcatatttgctctggcctacatcagtggctctttgactgtg aatggacagctggacagagagaacccactctactcatccggattcactctaactgtcaag ggcacggagttgaatgatgaccgtaccccgacggatgcctcggtgatgaccaccttcacc atactgctgattgacaagaacgacaacgcgcccaagttcaacagctccgagtaccgagtg cgtatcactgagctggcccaggtgggtttcgccctacccctcttcatccaggctgaggac aaggatgagggagtgaacagtatgtttcaggtgttcctaacggggaacaactcggatcac ttcaccatttcacccacagcggtgcagggccgtgctgacatcagggtgagggtggacgtg cctctggactacgagaacatccaaagatacagcttctctctatatgccaatgagtccatg tcagaacatgtgggttttgcccgtatcttcattgacctgatcaatgagaatgacaaccgg cccatcttccttaaatccctgtataacatcagtctgcctgagaacacacccagaggaacc tccctcctacgcatccaggctatagacggtgactttggcacatttgggacagtgcgatat tacttcagtgatgagcctgaacagttttcattggaccctgagacaggctgggtgcatctg tggggcaatctggactatgagctgatgcgtcgattcactctcaccgtgctggcccgggac gggggtggagaggagaccacgggcaggctgtgggtcaacgttctggatgtcaatgacaac acaccccttttccagaaggaggcctacatgggctcactgagagagaacgaacaggccgcg caacaggtggcccgagtcagggcaacagatgaggactctccccctaacaacttcctgacc tacaccctcacatcagtgtctgcgttccgtggttacttcagaatcaccatggtggagggc tacgcagtgattagtgtgaacagccctctggactacgagatggtccctgaaggaatgatc tacctgactgtgatggctaaagacggcgggaacccatcccttaacagcagtgtctctctc accgttgagctgtttgatgagaatgacaacccgccaaagttcagcaagccgtcctacctc gtcaagatccctgagaacataattgcaggggcgacggttgtgtttgtgaatgccactgat ctggacgcctcccgggagtttggacaggcctcactcatctactccctacagggctcctcc cagttccgcctcaacacacgctcaggagagataaccactacagccttactggacagagag ctgaagtcagagtacatcctgattgtcagagctgtggatggaggggtggggccactgcaa aagactggcattgccacggtgaacatcaccatcctggacataaatgacaattcccccatg tggcgagacgagccctaccacgccaatgtggtggagatgagccccatcgacactgacgtc atatctgtgctagcgatagacccagatgttggggacaatgggacagtggtgtacagcatc agcccagagaaccccttctacaccatcaacagcagcacaggcaagatcaggaccagcggg gccgtgctggacagagagaggtccaacccaaaagacatcctgctcatgaggaccatcatc gtgtctgctgtcgatcttggcagacctccactgcgttcctcagtcagcaccacagtgtac gtcaacttgctggaccttaatgacaatgaccccatcttccttaacctgccctttgtggcc gaggtgccagagggcctgcctagtggatcctctgtgttcaagatccaggtggaggaccct gatcaggaggagaatggtatggttaccatggggctactggtgggcatgccacgcgttgat ttttatctcaacaccaccacgggtgtgctgtactcaacggcaactctggaccgcgagcag attagcctgtaccacctgaggatcgtggcgtacgaccaagggcagaacccacgcacctcc accagcacccttaccatcacagtcctagatgccaacgacgagacccccaccttcttcccc aaggtgtacaacgtgtccctgcaggagagcgtccccagggaccatgtggtggctcgcctc aactgctccgacaatgacgctggccttaacgccgagctcagctacttcatcacaggtggt aaccaggatggtaaattcagtgttggcttcagagatggtgtggttcggactgtggttggc ttggacagagagacacaggctacatactcactggtcatagaggctatcgacaatggtcca gcaggcagcaggaggacaggcacagccacagtgtttgtagaagtactggacgtgaacgac aacagacccatcttcctccagaacagctacgagaccagcatactggagaatgtccccata ggatccagcatcctgcaggttcaggccacagattcagaccagggggagaacggcagggtt ctgtacaggatcctctctgacaacagtaagggtctgttcagaattaatgagctgtcgggg cttgtgatgcggggccagagggctctggacagagagagcagcagctcccacgtgctggag gtggaggcctacaacagtgaccagggcaggatgaggagctccgtacgggtgatagtatat gtggaggatgccaatgacgaggcaccagtgttcacccagcagcagtacaaccgcctgggt ctgagggagaccgctggcattggcacctctgtcatcgtagtacgagctacagaccctgac actggtgacggcggggcggtggcctacgccctggactctggctccgaccgtaagtttgat gtggatgtgagcacaggcctggtgaccactgtagactacctagactacgagaccaagacc agctacctgatgaacgtgtcggctaccgaccaggcgccaccgttccaccgcggcttctgt atggtctatgtgaccttacttaatgagctggacgaggcagtggcgttcttctctgcgggc tacgaggtgtcactcctggagaacattgccacaggaacggaggtggtgcaggtgcaggca cagtcggcggacaacctcaaccagctgtcgtatcgctttgacccggacacatcgccagcc gcccttgccctcttcaagatcgacagtatcacgggccgtatcacagtcacagggctgctg gacagggagaagggggacctctacaccctgactgtagtggctgacgatgggggacccaaa aaagactccactgtgaaggtgtcaatcaccatacaggatgagaatgacaacagtccagag tttgatatcacatctgattcattggtggagattccagagaacacacccattgggaagaga gtggctgtggtgcttgggcgcgacaaagatgccgggaaaaatggactggtgtacttcagg ctggtggcagggaacatgcaggatgtgtttgagatccggacagtgaaccacacctatgga gagatctacgtcaactcccctctggaccgagagtctgttgaccgctacctgctcaaggtg cgtgctatggacagcggtgtgcctccccgctacagagacctccctctaatcatcaacatc ctggacgtcaatgataacacacccgtcattgagagacaagtgggctacaatgtcagtatc agcgagaatgtgggaggcggtacgtccgtcctgcgtgtggtggccacagaccgtgacatc gggcccaacgccatgctcttctactacatcacctcgggtaacaaggatctcaccttccgg atggaccgcatgaccggtgagatggtgacacgaccatccccacctgaccgcgagcgccag caggagtactggctgatcatgatggtggaggacgacggcacgccgtcactatcgtcatcg actaccatctacgtgcgtatagtggatgagaacgacaacgcgccagagtttccagaggaa gagtatgtgacggtgctgagcgagggccccaacaccgtgggtgccattattgccacggta accgccatcgacccagacgagggcctcaatggcaccctgcgatatgccatcgtccacgga aacctggacatcaccttccacatcaatcacactaccggacggattgttgcagtgaaggag ctggactttgaaatcagcaatggacactacgcacttatcgtcacagcaacggaccagtgt cctatccatgccctccgcctgacttccagcaccacggtcatggtgaatgtcctggatgtg aacgatgtgacccccaccttcaccaagccctatgaggggccctttgagataacagagggc cagccggggcctcgggtctggaccctcaaggccatcgaccaggactctgggctcaacggc aaagtggagtacagcatcactgccggagacccccagaatgagtttgtggtatctccagtg gagggagagctgcgtgtgaggagagatgtggagctggacagagagaccacacccttctac aacatcactgtcatggccaaagacctgggcaacccaccacgcagcagcattgtggtggtg ggtgtccacgtgctggacatcaatgacaacgaccccatgctgttgaacctgccccacaac atcagtgtgagagagggggcgtccatccacaccttggtgaccacggtccaagcacgggac atggacagtggacgcaatgccctgctcacctacaacatcactgccggaaaccacgatgga gctttctacatcaatgacactacagggatggtgcaggtgaacaggcctctggacagagaa agggtgggggagtacagactgaccatcactgttaaagacaaccctgagaatccccgcatc gctcgccgggactcagacatgctggtgatcacagttctggatgataatgacaacaggccc atattcacacagaccagctaccgggctgagatcactgagaactccccctcaggcagtgct gtgtcagtgttgaatggaccagtgttggctgaggacaaagacattgggcccaacgctgtg gtcaggtaccgtctgctgggaacaagactggacctcttcactgtggactctgatacaggt gtagttcgtgtgcgacagaaggctctgttggaccgcgaggcgtttgtggagccgcgggtg gagctgctcctggtgggggaggatgtgggaggactcaacagcagcgtgcccctcactgtg acaatcatggaccagaacgacaaccctcctgtctttaacccccccagcctcactgtgcac ctccctgagaacagccccactggtgtggtggtgacccagctgtctgccagtgatgctgat tcaggctctaatgcctggctgctttaccggctggagagcggtgcccaggaccgcttcata gttgactccctctctggtgccgtcctggtgggaaactccagccttgaccgtgaggagcgt ggctcctaccgcctggttgtcgtggctactgaccgtggcacaccctcattgtcgggcaca gctaccctgtcggtcatcctggatgatgtcaacgactcacgaccacgtttcctggaaccc gtaacaactattaacataaacgagtctacaccaccgggcgtggtggtggcaacgctcacc gcgaaggaccctgacctacgaccccggctggaatattacatcatctctgtggaggcgaag gatgatggaaataaccctgttggtgggctgcaagagtcattcggcatcgatttccacacg ggtgctgtgtttgtgcgtaacccactcaacagagagctggtggccacctttgagattctt gtgtcggtgcatgacaacgccagtgatgtcattgacatgtcagtcagcgtacctaatgcg agactgatagtgaacgtgctggatgtgaatgacaacgccccgcggttcagaccctttgga gtggccaacttctcagagaagattctggaaggtgctcagccaggcaccactctgctgtcc gtgtcagctgtggacccagacaaaggccctaacggacaggtcatctacgagctgctacac ctgcccagaggggactacctcagactggaggacccatcaactggtaagatcgtagcctac cggacggtggactttgagcaggtgcagtggctgaacttcacagtgagagcccaggaccac ggcagtccacccaaagtggctgagcttcctgtctacctgcgtatagtagatgtcaatgat aacaaccctatcttttcacaaccctcttaccagaagccagtgtttgaggatgttgacttg ggcacggtcatagtgagagtcagagccacagatgcagactctggcctcttctctgtcatc gagtacagcctagtagatggagagggcaagtttggcatcactccctccactggtgacatc tacattctgtctccactggatagagagactaaagaccacttcaccctgacagccatcgct agggataaccctggcggcagccccaacaaccgacgagagaactctgttcaggtcttggtg accgttctggatgtgaatgacttccgtccgcgtttctcagagcgggcctttgagaccagt gtatttgagaatgagcccagtgggacgtctgtgatcacgctgactgccactgatttggac gaggggcagaacggcctgctctcttacagcatgcagggcccgggggcagatgccttctct ctggatgctgacacaggtctggtgcgttctctccgtctgctgcagtcctttgagcacttt aacttgacggtggtggctacagaccagggaagaccacccctctggggcaccgccacctta cgcatcatcatcatagatgtcaacgacaacaggcccatgttcgtcaggcccgccaacggc accatcatgcacatcatggaggagcagcccccaggcctgctggtgtatgaggtgtttgcg acagatggggatgaaggggtgaatggagaggtgcgctatgccttcctccagacaggagct gggaacagagactgggataacttccacattgatgctattacaggagtcatcaccaccgcc atcaaactggaccgagagaagcaagccctgcacagtctgattgttgtggcctatgacctg ggtcagcccgtgccttatgagaccacccagcccttacaggttgcgctgttggacattgat gacaacgagcctgtcttctttaagcccccgcgaggcagcctgccgtaccagactctgtct gtggcagagcactctactccagggacagtagtgggtaacgtgacaggagctgtggacgca gatgaaggctcaaacgctgtagtctacttcttcatagcagggggagatactgaaggtaac tttggcctgagcccagggggcgtactgaaggtgaagaaggatctggatcgtgaggacatc tcagtgtactccatcatcatcaaggcctccagccacaggaactgggcccctgcacggggt caaaggtcagcctggggaagagcacttgaccccagccgtgacccaaccctgcaggaggtc agaatctacctggaggacatcaacgaccagccaccacgcttcaccaagctagagtacact acaggtgtggctgctgatgccaaggtaggctcagatctgattcgggtacaggccatagac aacgatgtagggaacaacagtctggtgctgtaccatgtcctgtccattcgctacattaaa ctccagtccaatgacactgaggacataggaaacagcttcatcataggagagacagatggg atcatccgtacctatgacctgttcacggcttacgacccgggctacttcgtggtagaggtg ttggcacgggacctggcgggccacagtgacatcgccatggtgggcatctacatcctgcgg gatgaccagcgggtgaagatcgtcatcaacgagataccagagcgggtacgacagttccag gaggagtttatcaacctgctgtccaacatcaccggagccattgtcaacacggacgatgtg cagttccacgtggacaagaagggcagagtgaactttgcccagacagatgtgctcatacac gtggtcaacaagcacaccaaccgcatcctggatgtggaaaaggtgattcagatgattgat gagaacaaggaacagctgaagaaccttttcaggaattacaacatcctggatgtccagcct gccgtcagcgggagagcacctgatgacctcactacgctacagatggccatcattatctta gctgtgttgctcttcttggcagccatgtcattcatcttcatgaactggtactatcgcaca gtacacaagaggaagctgaaagccattgtagcaggatccacagggaagcaaggtctcatg gacatcctggatttgcccaacaccaataaatactcatttgagggggccaaccctgtgtgg ctagacccgttctgtcggaacctggagctagctgcccaggcagagcatgaagacgacctg ccggaaaacctcagtgagatcactgacctgtggaacagccccgtgcctactcacggaaca tttggccgcaagcctcaggccaagcctgaggatgaccgttacctgagagcagccatccag gagtatgacaacatcgccaagctgggccagatcatgagggaggggcccgttaagggcaca ttgctcaatgtggttctggacgactacctgaggctcaaaaagctctttgcagccagactg gtcaccaagtcgaccatccaaggcgaccaatcgtcagtcacagagctgatccagagtgac ctggatgatgacgaggatgagcaagtgggcatgggtggcagctggggtacgctgcgcttc aaacacaagctccccgtggagatgaggggacccgacggtgtgcacgttgttcacggcagc atgggaacgctcctgacctctgacctcaacagtctgcctgaggacaaccagctggccctg gcgcgctccatggaggcgcttaacgccaccgacagggggctgtacaccgagcgcaatgcc cgtactgagtcggccaagtccacgccgctgcaccacaacaacaaggtcgatgacacactg tcccagagcccgctggagatcacggagttatga

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