Owenweeksia hongkongensis: Oweho_0256
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Entry
Oweho_0256 CDS
T01677
Name
(GenBank) DNA/RNA helicase, superfamily II
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
oho
Owenweeksia hongkongensis
Pathway
oho03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oho00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Oweho_0256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oho03019
]
Oweho_0256
03009 Ribosome biogenesis [BR:
oho03009
]
Oweho_0256
Enzymes [BR:
oho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Oweho_0256
Messenger RNA biogenesis [BR:
oho03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Oweho_0256
Ribosome biogenesis [BR:
oho03009
]
Prokaryotic type
rRNA helicases
Oweho_0256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
P-loop_SecA
ERCC3_RAD25_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AEV31278
UniProt:
G8R7G7
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All DBs
Position
complement(276962..278083)
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AA seq
373 aa
AA seq
DB search
MKNFKELGIGADFVKGLAELNIIEPSEIQKKAIPLLMSGATDLVARAQTGTGKTAAYGLP
LLAQINPKRNAVQGLILCPTRELAKQVAKQLFKFTKYTDKIFAEAVYGGEHIDRQISALQ
RPTHILVATPGRLIDLVKKKAVNLSEVKTVVLDEADEMLSMGFKAELDEILSFLPAAKNK
WLFSATLPQGIQEIISKHLSEDAARLKASGDDIVNKNISHRYVMCEDSEKLPALLQFLKS
EGQNRGVIFCKTKAAAKLLSKQLIAKNIATDAIHGDLLQKERDKVMRSFKNETLRILIAT
DLAARGIDISDLTFVAHYQLPESDEYYTHRSGRTARAGKEGVSMCFVTPTEVQTLRNYER
NLDIKFSKVKRVG
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaattttaaagaacttggtattggcgctgactttgtaaaaggccttgctgaacta
aatattattgaaccttctgaaattcaaaagaaggccatacccctattgatgtcgggagct
acagatcttgtggcacgagcacaaacgggaaccggaaagacagctgcttacggtctgccc
ttgttggcacaaataaatccaaagcgcaatgccgttcaaggtttaattctatgtcccacg
cgtgaactggcaaaacaggtggccaagcagttattcaagtttactaagtataccgataaa
atttttgccgaagccgtttatggtggtgagcacattgaccgccagatttctgccctacaa
cgccctactcatattctggtagctacacccggccgattgattgatttggtgaaaaagaag
gccgtaaaccttagcgaagtaaaaactgtggtactggatgaagcagacgaaatgctgagc
atgggctttaaagccgaactggatgaaatcctgagttttcttcctgccgccaaaaacaaa
tggcttttttcagctacccttccgcaaggtatacaggaaatcatttccaaacacctttct
gaagatgctgcgcgccttaaagccagtggagacgatatcgtaaacaaaaatatttcgcac
cgctacgtgatgtgtgaagactctgagaaactgcctgctcttttgcagttcttaaagtca
gaagggcaaaaccgaggagtgattttttgcaaaacaaaagctgccgctaaactgctttct
aagcaattgatagcaaaaaacatagccacagatgccatacatggtgatttactccaaaaa
gagagagataaagtgatgcgctcctttaagaatgaaaccctacgcatacttattgccaca
gaccttgcagcaagaggaattgacatatctgacctcacctttgtagcacattaccaattg
cccgaaagtgatgaatactatacccaccgcagtgggcgaactgctcgtgccggcaaagaa
ggtgtttctatgtgttttgtaacccccaccgaagtgcagacgctacgcaactacgaacgc
aacctggacattaagttttctaaagtgaaaagggtgggctaa
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