Oncorhynchus keta (chum salmon): 118365596
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Entry
118365596 CDS
T09424
Symbol
recql5
Name
(RefSeq) ATP-dependent DNA helicase Q5 isoform X1
KO
K10902
ATP-dependent DNA helicase Q5 [EC:
5.6.2.4
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118365596 (recql5)
Enzymes [BR:
oke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118365596 (recql5)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
118365596 (recql5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ5
RecQ_Zn_bind
TFIIS_M
ResIII
KIX_2
SRI
Motif
Other DBs
NCBI-GeneID:
118365596
NCBI-ProteinID:
XP_035603833
EnsemblRapid:
ENSOKEG00005038826
LinkDB
All DBs
Position
32:complement(30198338..30213285)
Genome browser
AA seq
1050 aa
AA seq
DB search
MTSIKKALKTHFGFDKFRSQKQEDVVKAVVKGDRDVFVCMPTGAGKSLCYQLPAVLAKGI
TLVISPLIALIQDQVDHLRDLNIPACSINSKLPAGERRLILADLESESPRLKLLYITPEM
VASSAFQPCLTGLLSRSLLSYLAVDEAHCVSQWGHDFRPDYLKLGSLRARLPGIPCVALT
ATAPQKVQEDIAKSLRLRSPLSFATPVFRSNLHYEVVYRELLEDPYKHLHAFIREALTMG
ECPKGQGCGIVYCRTRDGCETVAYQLTKLGVLAKPYHAGLKAGDRTEAQTDWMQGKVLVI
VATISFGMGVDKSNVRFVAHWNLAKSLASYYQESGRAGRDGLPSSCRTYYSPKDREQLNF
LIRKEVARKQAKRGSEKDQDKASITDFEAMVSFCEQEGCRHATISKFFGDQKPDCAGACD
YCRDPKAVRAQLEKGATLCTKTGAAWSTQPRGPFGFDRDLYAGGRKGYGFERHDEEGWES
GGDDDGSEHRRKEFGDLFKKQMNLRKVSEGHKDSFIPPDDNCPLREASSQKIPRLTVKAR
EHCVALLQEALNNHQVAAADTHRSETLSLAVDIEHEVFKITKSSNLYKAAVLKRVSEMKK
GGAASAGGGGGGREGTSGSGESTEIKTESKDEAASSSSSLTEEQQGFTPASQIYSLKRKR
IGAGLRGSSNPFQTASELLRASNCEGSTTGPGANSGTGSGGPDCLAGSGESAGEEERRKR
KETNTGDTAPTISSSIRAKANAVSAFLNSPTKTGGKALSKKQKLAEAAKNSLNITQYFGR
KPIEKSQEVEIRTNDVSSQAFSIPPQSLPTQEITPATVSMDTIPMDTSPMEIIPMETIPI
ETIPMDTIPTEINNLDNNDDEEVKEEAKLDLDSITVQNAHESKAKSLLKLRLCADSEESE
ALPSAKRSCPLQDSRKKVTFNPKVQETVLEPGSPSTAPKPVSLKEVADIVVRCLDPFYTQ
GKFATKELFKSFARYLSHLLAEGRSRGRGQVKMQARNLIKKFFSSVKRCESEADWKHLKG
PHSTETSEHRGMGGGGTMNRKVEEDNNLGV
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgacttccattaaaaaggcgttaaaaacccattttgggttcgataagttccgatcccag
aagcaggaggacgttgttaaagcagttgttaaaggtgaccgggatgtttttgtgtgcatg
cccaccggggcagggaagtccctctgctaccagcttcccgcagtgttggctaagggtatt
accttggtcatatcccctcttatcgccctcatccaggaccaagtggaccacctaagggac
ctgaacattcctgcatgctccatcaactccaagctccctgcaggggagcgccgtctgatc
ctggccgatctggagagtgagagccccaggttgaagctgctttacatcaccccagagatg
gtggcctcctctgccttccagccctgccttacaggcctactctcccggagcctcctctcc
tacctggctgtggacgaggctcactgtgtctcccagtgggggcatgacttcagaccagac
tatctcaaactgggcagtctgcgtgcccgtcttcccgggataccctgcgtggcgctgacg
gccacggcaccccagaaggtgcaggaggacatagcaaagtccctgaggctgcgatcaccg
ctgtcctttgccacacctgtgtttcgcagtaacctgcattatgaggtggtgtacagggag
ctactagaggacccctacaagcacctacatgccttcatcagggaggccctgaccatgggg
gaatgccccaaaggacagggttgtggaattgtgtactgtcggaccagagatggctgtgag
acggtggcttaccaactgactaagctgggagtcctggccaagccttaccatgcagggttg
aaggcaggagatcgcacagaggctcagactgattggatgcagggtaaggtgcttgtcatt
gtggccaccatcagctttggcatgggggtggacaaatctaatgtcaggtttgtggcccat
tggaaccttgccaagtcactagccagttactaccaggaatctgggcgtgcagggcgagac
ggcctgccctcttcctgcaggacgtactactcccccaaggacagggagcagttgaacttc
ctcatccgcaaggaggtggcccgcaaacaggcaaagcgtggctccgagaaagatcaggac
aaggcttccatcacagacttcgaggccatggtgtcattctgtgagcaagagggctgccgc
catgccaccatctccaagttctttggggaccagaagccggactgtgcgggggcctgtgac
tactgtcgtgaccccaaggctgtgcgggcccagctggagaagggggccactttgtgcacc
aagactggagcagcttggagcacacagcccaggggcccgtttggatttgaccgtgacctc
tacgccggggggaggaagggctacggctttgagaggcatgatgaggagggctgggagagt
ggtggtgatgatgatggctccgagcatcggaggaaggagtttggagatctcttcaagaaa
caaatgaacctgcgcaaggtgtctgagggacacaaagattcatttatccccccagatgat
aactgcccactcagggaggccagcagccagaaaatccccaggctcactgtcaaggcccgg
gagcactgtgtggccctgttacaggaggctctgaacaaccaccaggtggcagcagcagac
acacacagatctgaaacactctccttggcagtggatattgaacatgaggtcttcaagatc
accaagtcttccaacctgtacaaagcagctgtcctgaagagagtatcagagatgaagaag
ggaggggctgcctctgcaggaggaggaggaggaggaagagaagggaccagcggctctggg
gaatccacagagataaagactgaatccaaagacgaagcagcctcctcctcttcctccttg
actgaggagcagcagggcttcacgcctgcctcacagatctactcactaaagcggaagaga
ataggagcaggtctgaggggctcctccaaccccttccagactgccagtgagctgctgagg
gcctctaactgtgagggctccactacaggtccaggggccaacagtgggacagggagcggg
ggccctgactgcctggctgggtctggagagtcagccggtgaggaggagaggaggaagagg
aaggagacaaatactggagatacagcaccaaccatcagctcctccatcagagctaaagcc
aatgcagtctctgccttcctgaacagtcccaccaagacaggaggcaaggccctgagcaag
aagcagaagctagcagaggctgctaagaactccctcaacattacccagtactttgggagg
aaaccgattgaaaagagtcaagaggtggagataagaaccaatgatgtgtcatctcaggcc
ttttcaataccaccccagtcactccccactcaggaaatcacacctgctactgtctccatg
gataccatccctatggacactagtcccatggaaatcatccccatggaaaccatccccatt
gaaactatccctatggacaccatccccacagaaatcaacaacttggataataatgatgat
gaagaggttaaagaggaagctaaactggacttggactctatcacagtgcaaaatgcacat
gaaagcaaggctaaatcgttgctaaaactaaggctatgtgcagacagtgaagagagtgag
gccctcccctcagccaagcgcagctgccccctacaggacagcaggaagaaggtgaccttt
aaccccaaagtccaggagactgtactggagccagggagcccaagcacagcccccaagcct
gtgtctctgaaggaggtggctgacattgtggtgcgctgtctagaccctttctatacgcag
ggcaagtttgccaccaaggagctgttcaagtcatttgcccgctacttgtctcatctacta
gcagaggggaggagtaggggaagaggtcaagtgaaaatgcaggccaggaatctgataaag
aagttcttcagcagtgtgaagcgctgtgagagtgaagcagactggaagcacctgaaggga
ccacacagcactgagacctctgaacacagagggatgggaggaggcgggactatgaacaga
aaggtggaggaggataacaacctgggggtctga
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