Oncorhynchus keta (chum salmon): 118397414
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Entry
118397414 CDS
T09424
Symbol
cldnf
Name
(RefSeq) claudin f
KO
K06087
claudin
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
oke04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118397414 (cldnf)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
118397414 (cldnf)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118397414 (cldnf)
04147 Exosome [BR:
oke04147
]
118397414 (cldnf)
Cilium and associated proteins [BR:
oke03037
]
Other cilia and associated proteins
Stereociliary proteins
118397414 (cldnf)
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
118397414 (cldnf)
Exosomal proteins of colorectal cancer cells
118397414 (cldnf)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Amastin
SUR7
MFS_MOT1
Colicin_V
DUF3185
TMEM174
DUF973
DUF3810
Fig1
Motif
Other DBs
NCBI-GeneID:
118397414
NCBI-ProteinID:
XP_035648026
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All DBs
Position
18:20304559..20305987
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AA seq
255 aa
AA seq
DB search
MGRIGKEVFGQVLSFIGFVGVAVTTGIPMWRVTTYIGANIVTGQIVWDGLWMNCVMQSTG
QMQCKINDSVMRLATDLQAARALVIISIIFIFVGLIVTFIGGQCTSTLKSESSKSKVTIL
GGILLLIGALLVLIPVCWSAAFTISDFNNPLTIETQRREIGASIYIGWGSTALLLIGGII
LCTSCPPQKMYGYPGYPQGAPMYPYPGQPMVQAGPYGRVYTPASRPYSGTGSYAPSKPYA
APIGYAVPGRPGQYL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgggaaggatcggaaaggaggtgtttggccaggtgctcagcttcatcggcttcgtgggg
gtggcagtgaccacgggtatccccatgtggagggtaaccacttacatcggtgccaacatc
gtaacaggacagattgtgtgggatggcctgtggatgaactgcgtgatgcagagcacggga
cagatgcagtgcaagataaacgactcagtgatgaggctagcgacagaccttcaggcagcg
agggccctggtcatcatctccatcatcttcatctttgtcggcctgattgtcaccttcatc
gggggccagtgcaccagcaccctgaagtctgaatcctccaagagtaaagtgacgatccta
ggaggcatcctgctgctcattggtgctcttctggtcctcatccccgtctgctggtcggca
gcgttcaccatctcagactttaataaccctctgaccatcgagacccagaggagggagata
ggagcctccatctacatcggctggggctccacagcgcttctcctcattggagggatcatc
ctctgcacctcatgcccaccccagaagatgtatgggtacccaggctatcctcaaggagca
cccatgtacccctatccaggccaaccaatggtccaggcagggccctatgggagagtttac
accccagccagcagaccctactcagggacaggttcgtatgcaccaagcaagccatatgca
gcaccaataggatacgctgtacctggacggcctggacagtatctgtaa
DBGET
integrated database retrieval system