KEGG   Oncorhynchus keta (chum salmon): 118397414
Entry
118397414         CDS       T09424                                 
Symbol
cldnf
Name
(RefSeq) claudin f
  KO
K06087  claudin
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04514  Cell adhesion molecules
oke04530  Tight junction
Brite
KEGG Orthology (KO) [BR:oke00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    118397414 (cldnf)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    118397414 (cldnf)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:oke03037]
    118397414 (cldnf)
   04147 Exosome [BR:oke04147]
    118397414 (cldnf)
Cilium and associated proteins [BR:oke03037]
 Other cilia and associated proteins
  Stereociliary proteins
   118397414 (cldnf)
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   118397414 (cldnf)
  Exosomal proteins of colorectal cancer cells
   118397414 (cldnf)
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Amastin SUR7 MFS_MOT1 Colicin_V DUF3185 TMEM174 DUF973 DUF3810 Fig1
Other DBs
NCBI-GeneID: 118397414
NCBI-ProteinID: XP_035648026
LinkDB
Position
18:20304559..20305987
AA seq 255 aa
MGRIGKEVFGQVLSFIGFVGVAVTTGIPMWRVTTYIGANIVTGQIVWDGLWMNCVMQSTG
QMQCKINDSVMRLATDLQAARALVIISIIFIFVGLIVTFIGGQCTSTLKSESSKSKVTIL
GGILLLIGALLVLIPVCWSAAFTISDFNNPLTIETQRREIGASIYIGWGSTALLLIGGII
LCTSCPPQKMYGYPGYPQGAPMYPYPGQPMVQAGPYGRVYTPASRPYSGTGSYAPSKPYA
APIGYAVPGRPGQYL
NT seq 768 nt   +upstreamnt  +downstreamnt
atgggaaggatcggaaaggaggtgtttggccaggtgctcagcttcatcggcttcgtgggg
gtggcagtgaccacgggtatccccatgtggagggtaaccacttacatcggtgccaacatc
gtaacaggacagattgtgtgggatggcctgtggatgaactgcgtgatgcagagcacggga
cagatgcagtgcaagataaacgactcagtgatgaggctagcgacagaccttcaggcagcg
agggccctggtcatcatctccatcatcttcatctttgtcggcctgattgtcaccttcatc
gggggccagtgcaccagcaccctgaagtctgaatcctccaagagtaaagtgacgatccta
ggaggcatcctgctgctcattggtgctcttctggtcctcatccccgtctgctggtcggca
gcgttcaccatctcagactttaataaccctctgaccatcgagacccagaggagggagata
ggagcctccatctacatcggctggggctccacagcgcttctcctcattggagggatcatc
ctctgcacctcatgcccaccccagaagatgtatgggtacccaggctatcctcaaggagca
cccatgtacccctatccaggccaaccaatggtccaggcagggccctatgggagagtttac
accccagccagcagaccctactcagggacaggttcgtatgcaccaagcaagccatatgca
gcaccaataggatacgctgtacctggacggcctggacagtatctgtaa

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