Oncorhynchus kisutch (coho salmon): 109870234
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Entry
109870234 CDS
T09179
Name
(RefSeq) integrin beta-4 isoform X2
KO
K06525
integrin beta 4
Organism
oki
Oncorhynchus kisutch (coho salmon)
Pathway
oki04510
Focal adhesion
oki04512
ECM-receptor interaction
oki04810
Regulation of actin cytoskeleton
oki04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oki00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109870234
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
109870234
09142 Cell motility
04820 Cytoskeleton in muscle cells
109870234
04810 Regulation of actin cytoskeleton
109870234
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oki04147
]
109870234
04515 Cell adhesion molecules [BR:
oki04515
]
109870234
04090 CD molecules [BR:
oki04090
]
109870234
Exosome [BR:
oki04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
109870234
Exosomal proteins of bladder cancer cells
109870234
Cell adhesion molecules [BR:
oki04515
]
Integrins
Integrin beta subunits
109870234
CD molecules [BR:
oki04090
]
Proteins
109870234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Integrin_B_tail
Pur_ac_phosph_N
Calx-beta
PSI_integrin
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
109870234
NCBI-ProteinID:
XP_020316228
Ensembl:
ENSOKIG00005045986
LinkDB
All DBs
Position
LG25:complement(18169509..18199727)
Genome browser
AA seq
2017 aa
AA seq
DB search
MGRWTLHLLVGVVLLAVLTASCYAEKVNHCLATRASTCSECIQSGKGCAYCPDEIFDGPR
CDLHDNIISRGCNSAVTAKSSMSMERNEQIDMLLKQSQVAPQEMSMTLLPGEEREIEMEV
FEPAKGPLDLYILMDFSNSMEDDLDNLKRMGAELAALVGKLSDDYTIGFGKFVDKVVEPQ
TDMRPSKLAKPWPNSDPPFSFRHVITLTPDLRSFTEKLQKERISGNLDAPEGGFDAILQA
AVCGEKIGWRSHATHLLVFSTESAFHYEADGANVLAGIMPRNDEQCHLDPEGKYTEDTRQ
DYPSVPTLVRLLGKHNIIPIFAITNHSFTYYQKLYEYFPIAELGLLQEDSANILNILEKA
FENIRSKISIRAEDRPKAIEAQVLSYSGSVAQAGTFKVKPGQIGKFKVRVKASEMVGEQH
VCSLEQGDKKGKMRVKPTTFSTALNINAEVLCKTCDCEKTPTKNAVRCTGHGDLVCGKCR
CYGGWLGPFCNCSTSASPVAGSSCLGPDVGEPCSGRGDCLCGTCVCYNTDQYEGPLCQFD
KSQCQRYGGFLCNDRGRCFMGQCACAEGWEGPACECPMSNQTCLDTKGGVCNGRGVCKCG
RCECQDSGLAMTPTCEANFQAQLGMCEDKRSCVQCQAWKTGEKKDSDQCDQCQFKVIMVD
ELKENKEVIEACSFRDEDDDCTYHYTVDYPEEQTDKELEVQVLKKKDCPPAGFLWLIPLI
MFLMLLLGLLLLCCWKYCACCKACLALLPCCGRGRMVGFKEDQYMLRQSLLTSDHLDTPL
VRTGPPKSTDVVRWKITDNVHRSPNHPLAQVQPNPKETIQFPLSLRLNRLFTESLSHPDA
RDTEMLRREVDDNLNEVYKHVPGAQRVQNTKFRLQRNAGKRKDHTIVDTVVSAPRSSYPD
IVKLTEKNVQSGNFQDLKVVPGYYTVATDREAAGAVEFQEGVETVDVRVPLFIKEDDDDK
KQLQVEAVDVPLGIAEIGKRFVNITIIKEHAKSIMSFLQPSYTYSRQDRVANIPISREII
EDGHTQVTYRTRDLTAKDKKDYVTVDGELSYGPGETQQTVPVRLLELGEGDGLLKDTQVK
QFVMDLSNPRQGAKLGRYPRTTVTITDQPEPSVMMFMKSTQNFSTADPTYSIPVVRTRNQ
EGPATVHWKTRNAKRFELSGPLKFSPGETEKNIVIDPRPHPGPVKPEIFQLELFDPSTNA
AVGERKTTMVTITDGALPEIAQKQQQGKDFINRTAMSPGGRLFSPTNVKAKATGPRNIRL
NWDPLGSPLGYKVKYWIYGDPETDGQVIDVKTTHAELTNLYPFCDYEMKVCGYNALGNGN
YSDMVPCQTLEDVPSEPGRLAFNVISPTVTQVSWAEPAETNGVITNYEVLYTPINDNTKP
MGVAKKVKIDNPKKRMLLIENLQSAQTYCYKVRAKNSVGWGPFREATINLASQPVRPMSI
PIIPDIPIVDAEAGDEYDGYLMYSSEVLRSPTGSKRPSVSDEDQMNGRWEQNFLFPGGNN
SMSRSANMSSSSYSQLSPMSTLSSNHRGGAGGSMTTESSTTYLSGQGGNSLSRTQVIGGG
TRTENVVMRKRSENRGYYEYDDNIRDSIVIGDLSSGLSGYADGKSTYGFSPTQTQYSYSM
SQVLRGRTQSEDVNDALLNLDRVLQDSRLASGVPDTPTRLVFSALGPTALKVSWQEPHCD
RDVLGYCVLYQLLNGGDMKRIDVSSPAENSVVVQDLLPNHSYLFKVKAQSLEGWGPEREG
VITIESAVNPNSPLSPMPGSPFTLSTPSAPGPLVFTALSPEALQLSWDKPRKPNGDILGY
VVTCEQLHGGGDMRSFQVSGDSAETSLTVPDLSENMPYKFKVQARTTQGFGPEREGIITI
ESQDGGSTSQIGGIGGMSQLGGLGGMSQIGGLGGMSQLGGLGGMSQIQGLGGMSQLGGLG
GMSQIEGLGGMSQYSSQSLTKRDVFQLPTEVSTHSNVTHTMINDPYFSGDGMMMTSQHTE
TSGMVTRHVTKEVVQRSMQVAGSSSVTKKVERSFYEA
NT seq
6054 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacattacatctcttggtgggggttgtacttcttgctgtcctcacagcc
agttgctacgctgaaaaagtaaatcactgtctggctacgagggctagcacctgttcagaa
tgtattcagtcagggaagggctgtgcctactgtccagatgagatctttgatggtccccgc
tgtgaccttcatgacaacatcataagccgcggctgtaatagcgcggtgacagccaaaagc
agcatgtcgatggaaagaaacgagcagatcgacatgctgttgaagcagtcccaggtagct
cctcaggagatgtctatgactctgctgccaggggaggagagggagatcgagatggaggtg
tttgaaccagctaaaggacctctggacctctacattcttatggacttctccaactccatg
gaggacgacctggacaacctcaagagaatgggtgctgagctggctgcgttggtggggaag
ctgtctgatgattacaccatcggtttcggcaagtttgtggacaaagtggtggagccccag
acagacatgagaccatccaaacttgccaagccttggcccaacagcgaccctcccttctcg
ttccgtcatgtgatcactctgacccctgacctgcggtccttcaccgagaagctgcagaag
gagaggatctcagggaacctggacgctccagaggggggcttcgacgccatactgcaggct
gcagtctgcggggaaaagatcggctggcgtagccatgccacccacctcctggtcttctcc
accgagtcggccttccactacgaggcggacggtgccaacgtgctggcgggcatcatgcca
cgcaacgacgagcagtgccacctggaccccgaggggaaatacacagaggacaccaggcag
gactacccctctgtccccaccctggtccgcctgctgggcaaacacaacattatccccatc
ttcgccatcacaaaccactcctttacctattatcagaagctttatgagtatttccccatc
gctgagttgggtctgctacaggaagactctgctaacatcctcaatatcctggagaaagcc
tttgagaatatccgctctaagatcagcatccgtgctgaggacaggcctaaagctatagaa
gctcaggtcctatcgtacagtggcagtgttgcgcaggctggaaccttcaaagtcaagcct
ggacaaatagggaagtttaaggtgcgtgtcaaggccagtgagatggttggggagcaacat
gtgtgcagtctggagcagggtgacaaaaaggggaagatgagagtcaaaccgacaaccttc
agcacggctctaaacatcaacgccgaagtgctctgtaaaacctgcgactgtgagaagacc
cccactaaaaatgcagtgcggtgtacaggccacggggacctggtctgtgggaagtgccgg
tgctacggtggctggctgggtccgttctgtaactgctcaaccagtgcgtcgccggtggcg
ggtagttcctgtctgggtcctgacgtgggggagccgtgttctggccgaggagattgcctg
tgtggaacgtgtgtgtgttacaacaccgaccagtacgagggacccctctgtcagtttgac
aagtcccagtgtcaacgatacggaggcttcctctgcaacgaccgtggtcgttgcttcatg
ggtcagtgtgcgtgtgcagagggctgggagggaccggcctgtgagtgtcccatgagcaac
cagacctgtctggacactaaagggggtgtctgtaacgggcgtggtgtgtgtaagtgcggt
cgctgtgagtgccaggactctggcctggccatgacccccacctgcgaggctaacttccag
gcccagctggggatgtgtgaggacaagaggagctgtgtccagtgtcaggcctggaagacc
ggagagaagaaggacagcgaccagtgtgaccagtgccagttcaaagtgatcatggtggac
gagctcaaggaaaataaagaggtgattgaggcgtgtagtttccgcgacgaggatgacgac
tgtacgtaccactacaccgtggactaccctgaggagcagactgacaaggaactggaagtc
caggtgcttaaaaagaaagactgtccccctgctggcttcctgtggctgatccctctcatc
atgttcctcatgctactgctgggtctactgctgctctgctgctggaagtactgcgcctgc
tgcaaggcatgtcttgctctgctgccatgctgtggaagaggccgtatggttggctttaag
gaggaccagtacatgctccgccaatccctgctcacctctgaccacctggacacgccccta
gtgaggaccggcccgcccaagagcaccgacgtggttcgctggaagatcaccgacaatgtg
caccgatcgcccaatcacccgctggcgcaggtccagcccaaccccaaagagaccatccag
ttccctctgtccctgcgtctgaacaggttgttcacagaaagtctgtctcaccccgacgcc
agagacacggagatgctgcgcagggaggttgatgacaacctgaatgaagtgtacaagcat
gttcctggagcccagagggttcagaataccaaatttagattacagaggaatgctggtaaa
agaaaagaccacacaattgtagacacagtcgtgtccgctcctcgctccagctaccctgac
atcgtcaaactgactgagaaaaatgtccagtctggaaacttccaagatctcaaagtggtg
ccgggctactacacagtggccacagacagagaggcggctggtgccgtggagttccaggag
ggggtggagacggtggatgtgcgcgtgccgctcttcatcaaggaagatgacgatgataag
aagcagctgcaggtggaggcggtggacgttcctctgggcatcgctgagatagggaaacgc
ttcgtcaacatcaccatcatcaaagaacacgccaagagtattatgtcattcctgcagcct
tcctacacctacagccgacaggacagagtggctaacatccccattagcagagagatcata
gaggacggacacacacaggtcacctaccgcacccgagacctcaccgccaaggacaagaag
gactatgtgacagtggatggggaactgtcctacgggccaggggagacccagcagactgtc
cctgtgcgtctattggagctgggagagggagacggtctgctgaaggacacacaggtcaaa
caatttgtcatggacctcagtaacccaagacagggagccaagctgggacgctaccccaga
accaccgtcaccatcactgaccaaccagagcccagtgtgatgatgtttatgaagagcacc
cagaacttctccacagctgacccaacctactccatccccgtggtccgcacacgcaaccag
gaggggcccgccaccgtccactggaagacccgcaatgccaagcgcttcgaactgtccggt
cccctcaagttttctccaggggagactgagaagaacatcgtgatcgacccacgccctcac
cctggaccggtcaaaccagaaatcttccagctggagttgtttgaccccagtacgaacgcc
gcggtcggggagaggaagacgacaatggtcacgattactgatggagcattaccagagatt
gcccagaagcagcagcagggtaaggatttcatcaaccggacagccatgtctcctggtggt
cgtctcttctctcccaccaacgtcaaggctaaagccactggcccacgaaacatccgtctc
aactgggaccccctaggaagccccctgggctacaaggtgaagtattggatctatggggac
cctgagactgatggccaggtgatagatgtgaagaccacccacgctgagctgaccaacctg
taccccttctgtgactacgagatgaaggtgtgtggctacaacgccctgggaaacggaaac
tacagcgacatggtgccctgtcagaccctggaggacgtccccagtgagcccggtcgtctt
gcgttcaacgtcatcagtccaaccgtcactcaggtcagctgggcggagcctgccgagacc
aacggtgtcatcaccaactacgaggtcctctacacacccatcaatgacaacacaaagccg
atgggtgtagctaagaaggttaagatagacaaccctaagaagaggatgttgctaattgag
aacctgcagtcggcccagacctactgctataaggtccgggctaagaacagcgttggctgg
ggtccattcagagaggcaaccatcaacctggcctcacagcccgtcagacccatgtccatc
cctatcatcccagacatcccaatagtggacgcggaggcgggggatgagtacgacggttac
ctgatgtacagcagcgaggtcttgaggtcgccaacaggctccaagagacccagcgtctca
gacgaagaccaaatgaacggcaggtgggaacaaaacttcctgttccccgggggaaataat
tccatgtcgcgcagtgccaatatgtcgtcttccagctacagccagctgtctcccatgtcc
accctcagctccaaccacagaggaggggccggaggttccatgactacggagtcctccaca
acatacctctctggacaaggagggaactcgctctcccgcactcaggtgatcgggggcggg
acgcgcacagagaatgttgtcatgaggaagcggtcagagaaccgaggttactatgagtat
gacgacaacatccgagattccatcgtcataggagacctgtccagtggattgtcgggatac
gcagacggcaaaagtacttatggcttcagccccactcagacacagtacagctacagtatg
tctcaggtcttgaggggcaggacccagtctgaggatgtcaacgatgcgctactgaatctg
gacagggtgctccaggactctcgtttggcctctggggtccctgacacccccaccaggttg
gtgttctctgccctgggccccacggccctgaaggtcagctggcaggagccccactgtgac
agggatgtgctggggtactgtgttctctaccagctactcaatggaggtgatatgaagcgt
atagacgtgtccagcccagcagagaactctgtggtggtgcaggacctgctgcctaaccac
tcctacttgttcaaggtgaaggctcagagtctggagggctggggaccagagagggaggga
gtcatcaccatagagtcagccgtcaaccccaacagcccactcagtccaatgccaggttct
cccttcactctcagcacccccagtgctccaggccccctggtattcacagctctgtccccc
gaggcactgcagctgagctgggacaaaccccgtaaacccaacggagatatcctgggctac
gtggtcacctgtgaacagctgcacggaggaggtgacatgcgttccttccaggtgagcggt
gacagcgctgagaccagtctgacggttccagacctgagtgagaacatgccatacaagttc
aaagttcaggccaggacgacgcagggcttcgggcccgagagggagggtatcatcaccatc
gagtctcaggatgggggtagcacgtctcaaataggtggaataggtggtatgtctcaacta
ggagggctaggtggtatgtcccaaataggaggcctaggtggtatgtctcaactaggaggc
ctaggtggtatgtcccaaatacaaggcctaggaggtatgtctcaactaggaggcctaggt
ggtatgtcccaaatagaaggcctaggaggtatgtctcagtacagcagtcagtccttgacc
aagagagatgtgttccaactgccgacagaggtcagcacccacagcaacgtcacacacacc
atgatcaacgacccctacttctcaggggacggtatgatgatgacttcccagcacacagag
accagcggcatggtaacccgtcatgtgactaaggaggtggtccagaggagcatgcaggtg
gccggctccagcagcgtcaccaagaaggtcgagaggtcgttctatgaggcttga
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integrated database retrieval system