KEGG   Oncorhynchus kisutch (coho salmon): 109870234
Entry
109870234         CDS       T09179                                 
Name
(RefSeq) integrin beta-4 isoform X2
  KO
K06525  integrin beta 4
Organism
oki  Oncorhynchus kisutch (coho salmon)
Pathway
oki04510  Focal adhesion
oki04512  ECM-receptor interaction
oki04810  Regulation of actin cytoskeleton
oki04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:oki00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    109870234
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    109870234
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    109870234
   04810 Regulation of actin cytoskeleton
    109870234
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oki04147]
    109870234
   04515 Cell adhesion molecules [BR:oki04515]
    109870234
   04090 CD molecules [BR:oki04090]
    109870234
Exosome [BR:oki04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   109870234
  Exosomal proteins of bladder cancer cells
   109870234
Cell adhesion molecules [BR:oki04515]
 Integrins
  Integrin beta subunits
   109870234
CD molecules [BR:oki04090]
 Proteins
  109870234
SSDB
Motif
Pfam: Integrin_beta fn3 Integrin_B_tail Pur_ac_phosph_N Calx-beta PSI_integrin I-EGF_1 EGF_2
Other DBs
NCBI-GeneID: 109870234
NCBI-ProteinID: XP_020316228
Ensembl: ENSOKIG00005045986
LinkDB
Position
LG25:complement(18169509..18199727)
AA seq 2017 aa
MGRWTLHLLVGVVLLAVLTASCYAEKVNHCLATRASTCSECIQSGKGCAYCPDEIFDGPR
CDLHDNIISRGCNSAVTAKSSMSMERNEQIDMLLKQSQVAPQEMSMTLLPGEEREIEMEV
FEPAKGPLDLYILMDFSNSMEDDLDNLKRMGAELAALVGKLSDDYTIGFGKFVDKVVEPQ
TDMRPSKLAKPWPNSDPPFSFRHVITLTPDLRSFTEKLQKERISGNLDAPEGGFDAILQA
AVCGEKIGWRSHATHLLVFSTESAFHYEADGANVLAGIMPRNDEQCHLDPEGKYTEDTRQ
DYPSVPTLVRLLGKHNIIPIFAITNHSFTYYQKLYEYFPIAELGLLQEDSANILNILEKA
FENIRSKISIRAEDRPKAIEAQVLSYSGSVAQAGTFKVKPGQIGKFKVRVKASEMVGEQH
VCSLEQGDKKGKMRVKPTTFSTALNINAEVLCKTCDCEKTPTKNAVRCTGHGDLVCGKCR
CYGGWLGPFCNCSTSASPVAGSSCLGPDVGEPCSGRGDCLCGTCVCYNTDQYEGPLCQFD
KSQCQRYGGFLCNDRGRCFMGQCACAEGWEGPACECPMSNQTCLDTKGGVCNGRGVCKCG
RCECQDSGLAMTPTCEANFQAQLGMCEDKRSCVQCQAWKTGEKKDSDQCDQCQFKVIMVD
ELKENKEVIEACSFRDEDDDCTYHYTVDYPEEQTDKELEVQVLKKKDCPPAGFLWLIPLI
MFLMLLLGLLLLCCWKYCACCKACLALLPCCGRGRMVGFKEDQYMLRQSLLTSDHLDTPL
VRTGPPKSTDVVRWKITDNVHRSPNHPLAQVQPNPKETIQFPLSLRLNRLFTESLSHPDA
RDTEMLRREVDDNLNEVYKHVPGAQRVQNTKFRLQRNAGKRKDHTIVDTVVSAPRSSYPD
IVKLTEKNVQSGNFQDLKVVPGYYTVATDREAAGAVEFQEGVETVDVRVPLFIKEDDDDK
KQLQVEAVDVPLGIAEIGKRFVNITIIKEHAKSIMSFLQPSYTYSRQDRVANIPISREII
EDGHTQVTYRTRDLTAKDKKDYVTVDGELSYGPGETQQTVPVRLLELGEGDGLLKDTQVK
QFVMDLSNPRQGAKLGRYPRTTVTITDQPEPSVMMFMKSTQNFSTADPTYSIPVVRTRNQ
EGPATVHWKTRNAKRFELSGPLKFSPGETEKNIVIDPRPHPGPVKPEIFQLELFDPSTNA
AVGERKTTMVTITDGALPEIAQKQQQGKDFINRTAMSPGGRLFSPTNVKAKATGPRNIRL
NWDPLGSPLGYKVKYWIYGDPETDGQVIDVKTTHAELTNLYPFCDYEMKVCGYNALGNGN
YSDMVPCQTLEDVPSEPGRLAFNVISPTVTQVSWAEPAETNGVITNYEVLYTPINDNTKP
MGVAKKVKIDNPKKRMLLIENLQSAQTYCYKVRAKNSVGWGPFREATINLASQPVRPMSI
PIIPDIPIVDAEAGDEYDGYLMYSSEVLRSPTGSKRPSVSDEDQMNGRWEQNFLFPGGNN
SMSRSANMSSSSYSQLSPMSTLSSNHRGGAGGSMTTESSTTYLSGQGGNSLSRTQVIGGG
TRTENVVMRKRSENRGYYEYDDNIRDSIVIGDLSSGLSGYADGKSTYGFSPTQTQYSYSM
SQVLRGRTQSEDVNDALLNLDRVLQDSRLASGVPDTPTRLVFSALGPTALKVSWQEPHCD
RDVLGYCVLYQLLNGGDMKRIDVSSPAENSVVVQDLLPNHSYLFKVKAQSLEGWGPEREG
VITIESAVNPNSPLSPMPGSPFTLSTPSAPGPLVFTALSPEALQLSWDKPRKPNGDILGY
VVTCEQLHGGGDMRSFQVSGDSAETSLTVPDLSENMPYKFKVQARTTQGFGPEREGIITI
ESQDGGSTSQIGGIGGMSQLGGLGGMSQIGGLGGMSQLGGLGGMSQIQGLGGMSQLGGLG
GMSQIEGLGGMSQYSSQSLTKRDVFQLPTEVSTHSNVTHTMINDPYFSGDGMMMTSQHTE
TSGMVTRHVTKEVVQRSMQVAGSSSVTKKVERSFYEA
NT seq 6054 nt   +upstreamnt  +downstreamnt
atggggagatggacattacatctcttggtgggggttgtacttcttgctgtcctcacagcc
agttgctacgctgaaaaagtaaatcactgtctggctacgagggctagcacctgttcagaa
tgtattcagtcagggaagggctgtgcctactgtccagatgagatctttgatggtccccgc
tgtgaccttcatgacaacatcataagccgcggctgtaatagcgcggtgacagccaaaagc
agcatgtcgatggaaagaaacgagcagatcgacatgctgttgaagcagtcccaggtagct
cctcaggagatgtctatgactctgctgccaggggaggagagggagatcgagatggaggtg
tttgaaccagctaaaggacctctggacctctacattcttatggacttctccaactccatg
gaggacgacctggacaacctcaagagaatgggtgctgagctggctgcgttggtggggaag
ctgtctgatgattacaccatcggtttcggcaagtttgtggacaaagtggtggagccccag
acagacatgagaccatccaaacttgccaagccttggcccaacagcgaccctcccttctcg
ttccgtcatgtgatcactctgacccctgacctgcggtccttcaccgagaagctgcagaag
gagaggatctcagggaacctggacgctccagaggggggcttcgacgccatactgcaggct
gcagtctgcggggaaaagatcggctggcgtagccatgccacccacctcctggtcttctcc
accgagtcggccttccactacgaggcggacggtgccaacgtgctggcgggcatcatgcca
cgcaacgacgagcagtgccacctggaccccgaggggaaatacacagaggacaccaggcag
gactacccctctgtccccaccctggtccgcctgctgggcaaacacaacattatccccatc
ttcgccatcacaaaccactcctttacctattatcagaagctttatgagtatttccccatc
gctgagttgggtctgctacaggaagactctgctaacatcctcaatatcctggagaaagcc
tttgagaatatccgctctaagatcagcatccgtgctgaggacaggcctaaagctatagaa
gctcaggtcctatcgtacagtggcagtgttgcgcaggctggaaccttcaaagtcaagcct
ggacaaatagggaagtttaaggtgcgtgtcaaggccagtgagatggttggggagcaacat
gtgtgcagtctggagcagggtgacaaaaaggggaagatgagagtcaaaccgacaaccttc
agcacggctctaaacatcaacgccgaagtgctctgtaaaacctgcgactgtgagaagacc
cccactaaaaatgcagtgcggtgtacaggccacggggacctggtctgtgggaagtgccgg
tgctacggtggctggctgggtccgttctgtaactgctcaaccagtgcgtcgccggtggcg
ggtagttcctgtctgggtcctgacgtgggggagccgtgttctggccgaggagattgcctg
tgtggaacgtgtgtgtgttacaacaccgaccagtacgagggacccctctgtcagtttgac
aagtcccagtgtcaacgatacggaggcttcctctgcaacgaccgtggtcgttgcttcatg
ggtcagtgtgcgtgtgcagagggctgggagggaccggcctgtgagtgtcccatgagcaac
cagacctgtctggacactaaagggggtgtctgtaacgggcgtggtgtgtgtaagtgcggt
cgctgtgagtgccaggactctggcctggccatgacccccacctgcgaggctaacttccag
gcccagctggggatgtgtgaggacaagaggagctgtgtccagtgtcaggcctggaagacc
ggagagaagaaggacagcgaccagtgtgaccagtgccagttcaaagtgatcatggtggac
gagctcaaggaaaataaagaggtgattgaggcgtgtagtttccgcgacgaggatgacgac
tgtacgtaccactacaccgtggactaccctgaggagcagactgacaaggaactggaagtc
caggtgcttaaaaagaaagactgtccccctgctggcttcctgtggctgatccctctcatc
atgttcctcatgctactgctgggtctactgctgctctgctgctggaagtactgcgcctgc
tgcaaggcatgtcttgctctgctgccatgctgtggaagaggccgtatggttggctttaag
gaggaccagtacatgctccgccaatccctgctcacctctgaccacctggacacgccccta
gtgaggaccggcccgcccaagagcaccgacgtggttcgctggaagatcaccgacaatgtg
caccgatcgcccaatcacccgctggcgcaggtccagcccaaccccaaagagaccatccag
ttccctctgtccctgcgtctgaacaggttgttcacagaaagtctgtctcaccccgacgcc
agagacacggagatgctgcgcagggaggttgatgacaacctgaatgaagtgtacaagcat
gttcctggagcccagagggttcagaataccaaatttagattacagaggaatgctggtaaa
agaaaagaccacacaattgtagacacagtcgtgtccgctcctcgctccagctaccctgac
atcgtcaaactgactgagaaaaatgtccagtctggaaacttccaagatctcaaagtggtg
ccgggctactacacagtggccacagacagagaggcggctggtgccgtggagttccaggag
ggggtggagacggtggatgtgcgcgtgccgctcttcatcaaggaagatgacgatgataag
aagcagctgcaggtggaggcggtggacgttcctctgggcatcgctgagatagggaaacgc
ttcgtcaacatcaccatcatcaaagaacacgccaagagtattatgtcattcctgcagcct
tcctacacctacagccgacaggacagagtggctaacatccccattagcagagagatcata
gaggacggacacacacaggtcacctaccgcacccgagacctcaccgccaaggacaagaag
gactatgtgacagtggatggggaactgtcctacgggccaggggagacccagcagactgtc
cctgtgcgtctattggagctgggagagggagacggtctgctgaaggacacacaggtcaaa
caatttgtcatggacctcagtaacccaagacagggagccaagctgggacgctaccccaga
accaccgtcaccatcactgaccaaccagagcccagtgtgatgatgtttatgaagagcacc
cagaacttctccacagctgacccaacctactccatccccgtggtccgcacacgcaaccag
gaggggcccgccaccgtccactggaagacccgcaatgccaagcgcttcgaactgtccggt
cccctcaagttttctccaggggagactgagaagaacatcgtgatcgacccacgccctcac
cctggaccggtcaaaccagaaatcttccagctggagttgtttgaccccagtacgaacgcc
gcggtcggggagaggaagacgacaatggtcacgattactgatggagcattaccagagatt
gcccagaagcagcagcagggtaaggatttcatcaaccggacagccatgtctcctggtggt
cgtctcttctctcccaccaacgtcaaggctaaagccactggcccacgaaacatccgtctc
aactgggaccccctaggaagccccctgggctacaaggtgaagtattggatctatggggac
cctgagactgatggccaggtgatagatgtgaagaccacccacgctgagctgaccaacctg
taccccttctgtgactacgagatgaaggtgtgtggctacaacgccctgggaaacggaaac
tacagcgacatggtgccctgtcagaccctggaggacgtccccagtgagcccggtcgtctt
gcgttcaacgtcatcagtccaaccgtcactcaggtcagctgggcggagcctgccgagacc
aacggtgtcatcaccaactacgaggtcctctacacacccatcaatgacaacacaaagccg
atgggtgtagctaagaaggttaagatagacaaccctaagaagaggatgttgctaattgag
aacctgcagtcggcccagacctactgctataaggtccgggctaagaacagcgttggctgg
ggtccattcagagaggcaaccatcaacctggcctcacagcccgtcagacccatgtccatc
cctatcatcccagacatcccaatagtggacgcggaggcgggggatgagtacgacggttac
ctgatgtacagcagcgaggtcttgaggtcgccaacaggctccaagagacccagcgtctca
gacgaagaccaaatgaacggcaggtgggaacaaaacttcctgttccccgggggaaataat
tccatgtcgcgcagtgccaatatgtcgtcttccagctacagccagctgtctcccatgtcc
accctcagctccaaccacagaggaggggccggaggttccatgactacggagtcctccaca
acatacctctctggacaaggagggaactcgctctcccgcactcaggtgatcgggggcggg
acgcgcacagagaatgttgtcatgaggaagcggtcagagaaccgaggttactatgagtat
gacgacaacatccgagattccatcgtcataggagacctgtccagtggattgtcgggatac
gcagacggcaaaagtacttatggcttcagccccactcagacacagtacagctacagtatg
tctcaggtcttgaggggcaggacccagtctgaggatgtcaacgatgcgctactgaatctg
gacagggtgctccaggactctcgtttggcctctggggtccctgacacccccaccaggttg
gtgttctctgccctgggccccacggccctgaaggtcagctggcaggagccccactgtgac
agggatgtgctggggtactgtgttctctaccagctactcaatggaggtgatatgaagcgt
atagacgtgtccagcccagcagagaactctgtggtggtgcaggacctgctgcctaaccac
tcctacttgttcaaggtgaaggctcagagtctggagggctggggaccagagagggaggga
gtcatcaccatagagtcagccgtcaaccccaacagcccactcagtccaatgccaggttct
cccttcactctcagcacccccagtgctccaggccccctggtattcacagctctgtccccc
gaggcactgcagctgagctgggacaaaccccgtaaacccaacggagatatcctgggctac
gtggtcacctgtgaacagctgcacggaggaggtgacatgcgttccttccaggtgagcggt
gacagcgctgagaccagtctgacggttccagacctgagtgagaacatgccatacaagttc
aaagttcaggccaggacgacgcagggcttcgggcccgagagggagggtatcatcaccatc
gagtctcaggatgggggtagcacgtctcaaataggtggaataggtggtatgtctcaacta
ggagggctaggtggtatgtcccaaataggaggcctaggtggtatgtctcaactaggaggc
ctaggtggtatgtcccaaatacaaggcctaggaggtatgtctcaactaggaggcctaggt
ggtatgtcccaaatagaaggcctaggaggtatgtctcagtacagcagtcagtccttgacc
aagagagatgtgttccaactgccgacagaggtcagcacccacagcaacgtcacacacacc
atgatcaacgacccctacttctcaggggacggtatgatgatgacttcccagcacacagag
accagcggcatggtaacccgtcatgtgactaaggaggtggtccagaggagcatgcaggtg
gccggctccagcagcgtcaccaagaaggtcgagaggtcgttctatgaggcttga

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