Oryzias latipes (Japanese medaka): 101159373
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Entry
101159373 CDS
T02443
Symbol
clstn2
Name
(RefSeq) calsyntenin-2
KO
K22660
calsyntenin 2
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ola04515
]
101159373 (clstn2)
Cell adhesion molecules [BR:
ola04515
]
Cadherins
Cadherin related
101159373 (clstn2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
SpoIIIAH
DUF6479
SID-1_RNA_chan
Laminin_G_2
V_ATPase_I
Laminin_G_3
DUF4746
Motif
Other DBs
NCBI-GeneID:
101159373
NCBI-ProteinID:
XP_011481361
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All DBs
Position
13:32008549..32412859
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AA seq
944 aa
AA seq
DB search
MLRLVCVLAAAVWGLSAAHSKVNKHKPWIETSYHGVITENTDVVLLDPPLVALDKDAPVP
YAGEICAFNIHGLDAPFEAVVLNGTSGEGQLRARSLVDCELQKEYTFIIQAHDCGSGPRG
TEGKKSHKAVVHIQVDDVNEFAPVFREPQYHAAVTEGKIYDSILQVEATDQDCSPQYSQI
CNYQITTTNSPFAIDRNGNIRNTEKLSYDSQQHYEILVTAWDCGQKRALHPVPVHIDVKP
VCKPGWQGLNKRVDYEPGTGSKQLFPKMHLETCGEPLSSVRTTVELQTSHIGKGCDRETY
SEKSLQKLCGASSGSTDLLPAPSAATNWTASLLSDNGRDSDLIFRFDGHQAAKIPDWVVP
QNLTDQFTIATWMKHGPIPGLRAEKETLLCNSDKTEMNRHHYSLYVHNCRLVFLLRRDFI
QADAFRPAEFHWKLEQICDKEWHYYVINVEFPAVTLFVDGVTYDPYLVTDDWPIHPSQID
VQLTVGACWQGGEVTKPRFTQYFRGSLSGLTVRPGKIESQKVISCLQACKEGLDINSLES
LDKSIKFHFNPAQSILVMEADDLQNMNTAVRKVAYINSRQFPTPGIRRLKVSTAVQCFGE
DTCITIPDMDAVVMVLQPSEPRITISGAERLSRPAADFRASGGIFLFQDLHIISTVTRAD
TTAHRTAHQGGVLEEIIHNLDYCDVLVLGEELSPEHESLQLHRSSMLGKHLDATNSTSGM
SIYGVDSMSTYEQVIRQVRYYNWKPEQQTERRFRLTCSELNGRYTSNEFNLEVSVLHRSA
NMEHVNHMVAPPQYMQVVHHPSMISDSYPSHASGVPSAATVIIVVCIAALVVVVVLGIYH
IHVTHQQEVRLEDTAKEEDESWDDSALTITVNPMESLEEPQAPEEEASEEEEEEEEEEEE
EEEDDDDITSAESDDSEEELDVQLPRVQSSSKKSHSWDKTTITY
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgctgagattggtctgcgtgctggccgcggcggtctgggggctgagcgctgctcacagc
aaagtgaacaaacacaagccttggattgagacatcgtaccatggagtgatcactgagaac
acggacgtcgtgctgctggaccctccactcgtggccctggataaagacgcccccgtccca
tatgcaggggagatctgtgcattcaacattcatgggctggacgctccattcgaagcggtg
gtgctgaacgggacatctggcgagggccagctgagggcgcggagcctggtggactgtgag
ctgcagaaggaatacaccttcatcatccaggcgcacgactgcggctctggaccccggggc
accgagggcaaaaagtcccacaaggcagtggttcacatacaggtggacgatgtgaacgag
tttgcccccgtgttccgggagccccagtaccatgctgctgtgacggagggcaagatttat
gacagcatcctgcaagtggaggcaacagatcaggactgctccccgcagtacagccagatc
tgcaactaccagataacaaccacaaacagcccctttgccattgatcgaaatggtaacatt
cggaacacagagaaactgagctacgacagtcagcagcactatgagatcctggtcacggcc
tgggactgtggccagaagagagccttgcatccggtccccgtgcacattgacgtcaagccg
gtctgcaaacctggctggcaaggtctgaataagcgagtcgactacgagccaggaacaggc
agtaagcagctgtttcccaagatgcacctggagacgtgtggtgagcctctgtcctccgtt
aggaccacggtggagctgcagaccagccacatcgggaagggctgcgatcgagagacgtac
tctgagaaatctctgcagaagctttgtggtgcctcctctggcagtactgacctccttcct
gctcccagcgctgccaccaattggacagcatccctgctttctgacaacgggagggacagc
gatttgattttccgatttgatggtcatcaggccgccaaaatcccagactgggtggtacca
caaaatctgaccgaccagttcaccatagcaacatggatgaaacatggacctatacctggg
ctcagagcagagaaggagacattactctgcaactctgacaaaaccgagatgaatcgccat
cactattcactctatgtccataactgtcgcctggtattcctgctgaggagagacttcatc
caggcggacgccttcagaccggcagagttccactggaaactggagcagatttgcgataag
gagtggcattactacgtcatcaatgtggagttcccagcggtgacgctctttgtggacgga
gtcacctacgacccctacctggtgacagacgactggcccatccacccgtcgcagattgat
gtacagctcacagttggagcctgctggcaaggtggggaggtgaccaagccgcggttcact
cagtacttccggggaagcctgtctggactgaccgtccgacctgggaagattgagagtcag
aaagtgatttcatgtctacaagcctgcaaggaaggactggacattaactccctggagagc
ctggataagagtataaagttccactttaatccagctcagtccatcctggtaatggaggca
gacgacttgcaaaacatgaacactgctgtgaggaaggttgcctacatcaactcccgccag
tttcccacgccaggcattcgacgcctgaaagtctccaccgctgttcagtgctttggggaa
gacacctgtatcaccatcccagacatggatgcggtggtgatggtgctgcagcccagcgag
ccccggatcaccatctctggagcggagagactcagccggccggccgctgacttccgggct
tcaggaggaatctttctcttccaggacctccacatcatcagcacggttaccagagccgac
accaccgcgcaccgcacagcacatcaggggggtgtcctggaggagatcattcacaacctg
gactactgtgatgtcctggtgttgggggaggaactgagtccggaacacgagtctctccaa
ctacatcgaagctccatgctgggaaaacacctggacgccaccaattccacctctggcatg
tccatatatggtgtggactccatgtcaacctatgagcaggtaatccgacaggtgcgctac
tacaactggaaaccagaacagcaaacagagagaaggtttcgcctgacctgctcagagctc
aatggtcgctacaccagcaatgaattcaacctggaggtgagcgtcctgcaccggtcagca
aacatggagcatgtcaatcacatggtggccccccctcagtacatgcaggtggttcaccac
ccgtccatgatcagcgactcgtacccgagccatgcatcaggtgtacccagtgctgccaca
gtgattatcgtggtgtgtatcgccgccctggtggtggtggtggtgctgggcatttaccac
atccacgtgacccaccagcaggaggtgaggttggaagacacggctaaagaggaagacgag
agctgggatgactccgctctgacgatcacagtcaacccgatggagagcctggaggagccc
caggccccagaggaggaagcaagtgaggaggaggaggaggaagaggaagaggaggaggag
gaggaggaagatgacgatgacatcactagcgccgagtcagatgacagcgaagaggaattg
gacgtccagctaccccgagtgcaaagctcgagcaagaagagccacagctgggacaaaaca
acaataacttactga
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