Oryzias latipes (Japanese medaka): 101164014
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Entry
101164014 CDS
T02443
Name
(RefSeq) double-stranded RNA-specific editase B2 isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ola03041
]
101164014
Spliceosome [BR:
ola03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101164014
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
101164014
NCBI-ProteinID:
XP_020568378
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Position
20:9970858..10201477
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AA seq
769 aa
AA seq
DB search
MASLLGNGGRAAGAQAGQTAKMKLKRRRRRRSKRRAEKVSMLSALIAPFKYKIPGTGNME
DEDSLSTSSAEVKENRNIGNLEDCSIGSGERQPLLCSDSARSGSSGLKRKRPLEEDNNGH
LCQLRLIYKKLSWSEAPKNALVQLNELRPGLQYRMVSQTGPVHAPVFSIAVEVNGLTFEG
TGPTKKKAKMRAAELALKSFIQFPNAPQAHLAMGNISNPTADFTSDQADFPDTLFKEFES
SSCSDGLSLCNSGSESELLSSELLSSELLRHGRLLRHTLDLMVQAQQRLGGIVPEPDAPK
GPVAMLNELRPGLRYACLSERAEGRRLRNFVMAVRVDGRIFEGCGRSKKLAKTQAAQCAL
QALFNIRLAPEGRTGLKVSRKSCLHLPQDFADSVFYLVKEKYRLLVGGCSPAHTRHKSLA
GIVMTRDLDLRRAQVVALSTGTKCINGEYLSDQGQVVNDCHAEVTARRALLRFLYSQLEL
FLSKRMEDWEESIFVRHKERSYRLRDDVHFHLYISTSPCGDGRLNSPYEISTDLHSSRHL
MRKHRCHLRTKIESGEGTVPARCRGPVQTWDGVLQGEQLITMSCTDKLTRWNILGLQGAL
LSHFVEPVYLHSVTVGSLRHTGHLSRVLSQRQERLGPLPVSYRRNQPLLSGLSSAEYQQP
GKAACVSVNWTVGDVQLEVVNTVTGRRRDSGAPSRLCKHALFTRWSRLYRKLGIHASGSA
DGQLMYYEAKMAARPYQTAKQQWFRSLQETGLGTWVKKPPEQEHFLLSI
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggcatccctacttgggaacggcggccgcgcggcaggtgcgcaggctggacaaacggca
aagatgaagctgaagcggagacggaggaggcggtcgaagagaagagcagagaaagtcagc
atgctgtctgcattgatcgcacccttcaagtacaaaatccctgggacaggaaatatggag
gacgaggacagtttaagcaccagcagcgcagaggtaaaggaaaacaggaatattggtaac
ttggaggactgttccattggttccggagagcggcagccccttctctgttcggactcggcg
agaagtgggagctccggtctaaagaggaagcggcctctcgaggaagacaacaacgggcac
ttgtgtcagctacgactcatctataagaaactctcctggtctgaagctccaaagaatgca
ctggtgcagcttaacgagctccggccgggtctgcagtaccgcatggtgtcccagacgggg
cccgtccacgctcccgtcttctccattgcggtggaggttaatggactgacatttgagggg
acaggacccacgaagaagaaggctaagatgagggctgctgagctagccctcaagtccttc
atccagtttccaaacgctcctcaggctcacttggccatgggaaacatctccaaccctacg
gcggactttacttcagaccaggcggacttccctgacacacttttcaaagagtttgagtct
tcgtcgtgctcagacggcctctcactctgcaactcaggcagcgaaagtgagttgctgtcc
agcgagctgctgtccagcgagctgctccgacatggacgcctgctccgccacacgttggac
ctcatggtgcaggctcagcagaggctgggggggatcgttcctgagccggacgctcctaag
ggcccggtggctatgctcaacgagctccgaccgggcctgcgctacgcctgtctgtcagag
cgagccgagggcaggcggctgcgaaactttgtaatggcggtgcgcgtggacgggcgaata
tttgagggctgcggacgcagcaagaagctggccaagacccaggcagcgcagtgtgccctg
caggcgctcttcaacattagattagcccccgagggtaggactggcctcaaagtcagcagg
aaatcctgtcttcatttaccccaggattttgccgattcagtattttacctggtgaaggag
aagtaccggttgctggtggggggctgcagtcccgctcacactcgacacaaatccctggca
ggcatcgtaatgacccgagatttggacctgaggcgcgcacaggtggttgctttatccacc
ggcaccaaatgcatcaacggggaatacctgagtgaccaaggacaagtggtcaacgactgt
cacgctgaagtcaccgcgcgcagagctctgctgcggttcctctactctcagctggaactc
tttttgagtaaaaggatggaggactgggaggagtcgatattcgtacgccacaaagagcgc
agctacaggctcagagacgacgtccacttccacttgtacatcagcacatcgccgtgtggt
gacgggaggctcaactcgccctatgaaatttccactgacttgcacagcagcagacacctt
atgaggaagcaccggtgccacctgcggaccaaaatcgagtcgggcgaagggacggtgccg
gcccgatgcagggggcccgtccagacgtgggacggcgtcctgcagggcgagcagctcatc
accatgtcctgcactgacaagctcacaaggtggaacattttgggcctgcagggagcgctg
ctgagccactttgtggagccggtgtacttgcacagcgtgactgtgggcagcctgcggcac
acaggtcacctgagcagagtgttgagtcagcggcaggagcgcctgggcccacttcctgtc
tcgtacagacgcaaccagcccctgctgagcggactgagcagtgcagagtaccagcagccg
ggaaaggccgcctgcgtcagcgtgaactggactgtgggtgacgtgcagctggaggtggtc
aacacagtgacgggtcggaggcgagactcgggggcgccttcccgcctctgcaaacacgcc
ctgttcactcgctggagtcggctgtaccgcaagttggggatccacgcgtccggatctgcg
gacggtcagctcatgtactacgaggccaagatggcggcgcgcccctaccagacagccaag
cagcagtggttcaggtccctgcaggaaacgggccttggtacctgggtcaaaaagccccca
gagcaggagcacttcctgttgtccatctga
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