Oryzias latipes (Japanese medaka): 101166081
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Entry
101166081 CDS
T02443
Symbol
rpa2
Name
(RefSeq) replication protein A 32 kDa subunit
KO
K10739
replication factor A2
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola03030
DNA replication
ola03420
Nucleotide excision repair
ola03430
Mismatch repair
ola03440
Homologous recombination
ola03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101166081 (rpa2)
03420 Nucleotide excision repair
101166081 (rpa2)
03430 Mismatch repair
101166081 (rpa2)
03440 Homologous recombination
101166081 (rpa2)
03460 Fanconi anemia pathway
101166081 (rpa2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ola03032
]
101166081 (rpa2)
03400 DNA repair and recombination proteins [BR:
ola03400
]
101166081 (rpa2)
DNA replication proteins [BR:
ola03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
101166081 (rpa2)
DNA repair and recombination proteins [BR:
ola03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
101166081 (rpa2)
MMR (mismatch excision repair)
101166081 (rpa2)
DSBR (double strand breaks repair)
HR (homologous recombination)
101166081 (rpa2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TFA2_Winged_2
RNA_pol_Rpb5_C
Motif
Other DBs
NCBI-GeneID:
101166081
NCBI-ProteinID:
XP_004078319
UniProt:
A0A3P9LDZ8
H2MH47
LinkDB
All DBs
Position
16:complement(22811679..22817894)
Genome browser
AA seq
271 aa
AA seq
DB search
MWNQGGYSESGMVGGYTQSPGGFASPGLSQGEKKGRTRSTQIIPCTVSQLMSASQADEAF
KVGEVEVNQVTIVGIIRSTDKSMTYIQYRVDDMTGAPMDVKQWVDTEDPSVDSTVLPPGT
YVKVSGNLRSFQNHRSMVAFCIRPLEDMNEITSHMLEVVQAHMALGKPQNTLGGGGGMTA
GSVSKPAIGGMGGSYAGASDMTNNGLSPNQNQVLSLIRGCPEPQGISIQDLKHRLGGMSL
PMIKQAVEFLSNEGHIFSTIDEDHFKSTDND
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatcaaggaggctacagtgagtcgggaatggttgggggttacacgcagtctcct
ggaggctttgcatcgcctggcttgtcccaaggagagaagaaagggaggacccgttccact
caaattataccctgcacagtgtctcagttgatgtctgcatctcaggctgatgaagccttt
aaagtgggagaagtggaggttaaccaggtcaccattgttggcatcatcagaagcacggac
aaatccatgacctacatccagtacagggttgatgacatgacaggtgctcctatggatgtg
aagcagtgggtggatacagaggatccgagtgtggacagcactgttttgcctccaggaaca
tatgtcaaagtctctggaaacctacgctcttttcaaaaccacaggtctatggtggcgttc
tgtatcagacccctggaggacatgaatgaaatcacctcacacatgctggaagttgtccaa
gcacacatggcgctcggcaaaccgcagaacacccttggtggtggtggaggaatgactgct
gggagcgtgtccaagccagccattggaggaatgggaggcagctatgcgggtgccagcgat
atgactaacaacgggttaagtccaaatcaaaatcaggtgctgagtctaataagaggttgc
ccagaaccacagggtatcagcattcaagatctgaagcaccgacttggtggtatgagtctc
cccatgattaaacaggcggtggagttccttagcaacgagggtcacattttttccactatc
gacgaagaccacttcaaatcaaccgacaacgactag
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