Oryzias latipes (Japanese medaka): 101172329
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Entry
101172329 CDS
T02443
Name
(RefSeq) beta-hexosaminidase subunit alpha isoform X1
KO
K12373
hexosaminidase [EC:
3.2.1.52
]
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola00511
Other glycan degradation
ola00513
Various types of N-glycan biosynthesis
ola00520
Amino sugar and nucleotide sugar metabolism
ola00531
Glycosaminoglycan degradation
ola00600
Sphingolipid metabolism
ola00603
Glycosphingolipid biosynthesis - globo and isoglobo series
ola00604
Glycosphingolipid biosynthesis - ganglio series
ola01100
Metabolic pathways
ola04142
Lysosome
Module
ola_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
101172329
09103 Lipid metabolism
00600 Sphingolipid metabolism
101172329
09107 Glycan biosynthesis and metabolism
00513 Various types of N-glycan biosynthesis
101172329
00531 Glycosaminoglycan degradation
101172329
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
101172329
00604 Glycosphingolipid biosynthesis - ganglio series
101172329
00511 Other glycan degradation
101172329
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101172329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ola03110
]
101172329
Enzymes [BR:
ola01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.52 beta-N-acetylhexosaminidase
101172329
Chaperones and folding catalysts [BR:
ola03110
]
Intramolecular chaperones
Others
101172329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_20
Glycohydro_20b2
Glyco_hydro_20b
YozE_SAM_like
Motif
Other DBs
NCBI-GeneID:
101172329
NCBI-ProteinID:
XP_004070040
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All DBs
Position
6:16689991..16699006
Genome browser
AA seq
537 aa
AA seq
DB search
MKVMRAVNTKQCAPIIYALLQLIIFYAGLNAVKGVWPLPHALTSSVEQYPLNPQTFAFDY
GKHSATQQGCSLLDAAFRRYFLLIFPDYTAENGQLEVAANNSFSLYISTDHNDCENYPND
DSSERYNLSVSAGQASLNAATVWGILRGLETFSQLVYQDDLGSYFVNETFIEDFPRFQFR
GVLLDTSRHYLPVHAILKTLDAMSYSKFNVFHWHIVDDPSFPYQSRSFPELSKKGAFHPA
THIYTQSDVRRVISYARMRGIRVLPEFDSPGHTGSWGKGQSHLLTPCYKGGAPSGTFGPV
NPALQSTYQFMASFFKEVTSVFPDSYIHLGGDEVDFSCWRSNPHVRAFMQKMGFGGDFPK
LEAFYIENIVNITSANNKTSIVWQDVFDYHERRSALSVVEVWKHGCYLCKVRQVTKAGLR
VILASPWYLDLPGPTHNWARYYTVWPLAFPGSEKQKRLVIGGEVCMWGEYVDATNLFPKL
WPRASAAAERLWSDEKQTSSVEKAFPRLEDFRCKLLRRGIQAGPLNVGHCKHEYQSV
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtcatgagggcagtaaatacgaaacaatgcgcccctataatttacgctttactt
cagctaattattttctacgctggcctgaacgcagtaaagggagtgtggccgttaccgcac
gcgctcacttcgtcggtggaacaatacccgttaaatcctcaaacttttgcctttgattat
gggaaacactcagccacacagcagggatgttctcttctggatgctgcgttcaggagatac
ttcttgcttatttttccagactacaccgctgaaaatggtcaactggaagtagctgcaaat
aactcattcagtctctatatcagcactgatcacaatgactgtgagaattaccccaatgac
gactcatctgagagatacaatctgagtgtctctgctggacaagcatccctgaatgcagca
acagtttggggtattttaagaggtctggaaacgtttagtcagttggtgtatcaagatgat
cttggctcttattttgtgaatgaaacgttcatcgaagacttcccccggtttcagtttcgg
ggggttttactggacacttcacgccattatttaccagtgcatgccattttaaaaactctg
gatgctatgtcttacagtaagttcaatgttttccattggcacatcgttgatgacccatct
ttcccatatcagagccgctcctttcctgaactttctaagaagggggctttccatccagca
acacacatctacacacaatcagacgtgaggagagtgatctcatatgccaggatgcggggc
ataagagtccttccagagtttgattcaccgggacacacgggatcttggggaaaagggcag
tctcacctgttgactccttgctacaaaggaggcgctccttcaggtacctttggtcctgtc
aatccagcattacagtccacctatcagttcatggcatccttctttaaagaagtgacctct
gtgtttcctgactcatacatccacttgggaggtgatgaggtcgacttttcctgttggaga
tctaaccctcatgtccgtgcattcatgcagaagatggggtttgggggagatttccctaaa
cttgaagcattttacattgaaaacatcgtgaatatcacatcagctaataacaagacatca
attgtgtggcaagatgtctttgactaccatgaaaggcgcagtgctctgtcagtggtggag
gtttggaaacatggctgttacctgtgtaaagtacggcaggtgaccaaagcaggactccgg
gtaatcctagcctccccgtggtatctggacctaccaggacccacgcataactgggctcgc
tactacactgtgtggccccttgcctttcctggttctgaaaaacagaagaggctggttata
gggggtgaggtctgcatgtggggggaatatgtcgacgccaccaatctcttcccaaaactc
tggccaagagcaagcgctgctgcagagagactgtggagtgacgagaagcagacctccagt
gtggaaaaagcttttcctcgactggaagacttccgatgcaagctgctgaggcgtggaatc
caagcagggcctctcaatgtgggacattgcaaacacgaatatcaaagtgtttga
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