Oryzias latipes (Japanese medaka): 101173925
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Entry
101173925 CDS
T02443
Symbol
trappc8
Name
(RefSeq) trafficking protein particle complex subunit 8 isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
ola
Oryzias latipes (Japanese medaka)
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ola04131
]
101173925 (trappc8)
Membrane trafficking [BR:
ola04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
101173925 (trappc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
TRAPPC9-Trs120
Motif
Other DBs
NCBI-GeneID:
101173925
NCBI-ProteinID:
XP_011471279
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All DBs
Position
4:1514252..1557978
Genome browser
AA seq
1436 aa
AA seq
DB search
MAQCVQSVQEFLQDSFVPMVAVLCSKEADRVSRKNKLSFPELLRPFCRLLSEGHIRDPNN
QLQTVKNLRICVNAVTTNPVSSPAVLSPAQYRQLGEVVSSCQPLEGAAATSFKTGDYNLN
LSVTTPWFEAYRENFLQSMPASEHEFLNHYLACLLVVSSTEAVPVEQFLKLSQEQHRIQH
SGEYTHPRWFIPNTLKYYVLLHDLSEGDEQRAETVYEDMKQRYGSQGCYLLKINSRAVSA
EEDEQIPDPWSQYLHKNNLRYQDPADGAPAAEKGGDEEGGTFTQTRGGESGCLNNDPLQL
EADSSSTSLTDADVMKARTDTEGVAPVAVGRGSCLTLNDHDRIRQFVQEFTFRGLLPHIE
KNIRQLNDQLVSRKGLSRSLFTATKKWFGGGKAPEKGMSEPKSACGLLYPPEAPELQIRK
MADLCFLVQHYELAYSCYHTAKKDFLSDQALLYAAGALEMAAVSAFLQGGGARPYPAHYM
DTAIQKYRDDCRNMVLAERCALLSAEILKNQAKYSEAATLLIKMTSEDSDLRSALLLEQA
AHCFINMRSPMVRKFAFHMILAGHRFSKAGQRKHALRCYTQAMQVYKDRGWSLAEDHINF
TIGRQSFTLGQPESAVSAFRQILNDDSKQTATQQAAFLREYLYVHKSVMGEQVKSLPQLP
LPCILSAATRVYFGHEPRLAQGEKQAATHVSLDQEYDPELSAMWSRLEEQLVAAANRGIV
PVGFQPTQCCLNSQTENLRQPLAVLKEPIIVEVTFRNPLKVSLALSELSLLWRFSPHVSS
LSIREPVSEQLTGEVIGNEETLTTPNLSKDDIVTTEIIQEFHLNPEETRMARLKLLPHRT
GQLSIVGVTYNLSLSSSETTEEHHSMELVVRGRQDLNIQGPRLNQTKEEKMSVRHGTDRR
LDAIITPPMPLMEVFFLHFPSALLCGEIRKAYVEFCNVGAVALCGLRVASTHPEFFTFGC
NNPTPSSPASAEHGSAYKTFAATVQPGSVVSEVEVCAQDFTQLSGVLEIPIDGGTLHPGQ
SIQLPLWLRGPDHEGVHEINFLFYYESTEKGLKVSHRVLRHTVFICASRSLSVQASACRS
TAPPQRSADSMGCDGTLVFVDVENVNTSEGGMREFHIVQVSSSSQRWRLHKYINPDKDND
CKLSSREKAKLCFRATPCAPLPASMDSVEKYIFADLNLGNEQIISSSTPCRDFFFRCCRG
LELQQGEKTSRMGSKNKTVSTPDNCTSDPAAIAKKCNELDLTIIVIWKAFVVEDSKQLIL
EGQLHVALQTIGKEATSLMPKEEAQEMVLLKFKSDLPPPVALPSPEMSQLIKTNLHYPET
FSHGFLQDSLCMVPVTLTLSNCCSAPIEVLIDLRHRSTSAESQEFHSLFSWVGQSQYKLL
LRPHEVLSLALRACFFRAGVYNLNTARVFAKPAQQSSMSESNQQAASPALIIINGT
NT seq
4311 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagtgcgttcagtccgttcaggagttcctccaggactccttcgtcccgatggtc
gccgtcctgtgcagcaaagaggcggacagagtttcccgaaagaacaagctgagcttcccg
gagctgctgcggcctttctgcaggctcctctccgaaggtcacatcagggaccccaacaac
cagctgcagactgtgaaaaacctacgcatctgtgtcaatgcggtgaccacaaacccagtt
tcctcccctgctgttctcagcccggcccagtaccggcagcttggcgaggtggtgtcatcc
tgccagccgctggagggggctgcagccactagctttaaaacaggagactacaacctgaac
ttgagtgttaccactccgtggttcgaggcctacagggagaatttcctgcagtccatgcct
gcttctgagcacgagttcctgaatcactacctagcctgtctgctggtggtgtcctccact
gaggctgtccctgtggagcagttcctaaagctttcccaggagcagcacagaatccagcac
agtggagaatacactcaccccagatggttcatccccaacactctgaagtactacgtcctg
ctgcacgacctgagcgagggggatgaacagagggctgagaccgtttatgaggacatgaag
cagaggtatggctctcaagggtgctacctgcttaagatcaactcacgtgccgtctctgct
gaagaggacgaacagattccagatccctggagtcaatacctgcacaagaacaacctacgt
taccaggacccagctgatggagctccagctgctgagaaagggggtgacgaagaaggtggg
accttcacacaaacgagggggggcgagtccggctgcctgaacaacgatcctctgcagctt
gaggcagacagcagttcgacaagtctgaccgatgcagacgtgatgaaagcgagaacagac
acggagggtgtggcgcccgtggcagtgggccgtggatcatgcctcactttgaatgaccac
gaccgcatcaggcagtttgtccaggagttcaccttcaggggtctgctaccacacatcgag
aagaacatcagacagctcaacgaccagctggtttccaggaagggcctgagtcgctccctt
tttaccgccaccaagaagtggtttggtggaggtaaggctccggaaaagggcatgagtgag
cccaagagtgcctgcggcctcctgtatcctcctgaggcgcctgagctgcagatcaggaag
atggcagatctgtgtttcctggtgcagcattatgagctggcctacagctgctaccacacc
gccaagaaggacttcctgtcagaccaggccctgctgtacgccgccggagcgctggaaatg
gcagcagtttcagccttcctgcagggtgggggcgccagaccctaccctgctcactacatg
gacacggcaatccagaagtacagagacgactgcaggaacatggttctggcagagcgctgt
gctttactgagtgctgagatcctcaagaatcaggcaaagtactctgaggccgccacgctc
ctcatcaagatgaccagtgaggactcagacctgcgcagtgccctgctgctggagcaggcc
gcccactgtttcatcaacatgcgcagccccatggtgcggaagtttgccttccacatgatc
cttgccggtcaccgcttcagcaaagcaggccagaggaaacacgcgctgcggtgttacact
caggccatgcaggtctataaggatcgaggctggtctttagcagaagatcacatcaatttt
accattggccgccagtccttcacccttggccaaccggagagtgcagtgagcgccttcagg
cagatcctaaacgacgacagcaagcagacggccacgcaacaggcggcttttctcagagag
tacctctatgttcacaagagtgtgatgggggagcaggtgaagagtctcccccagctgccg
ctgccatgcatcctcagcgctgctacaagggtctacttcggacacgaacctcgcctcgct
caaggggagaagcaggcggcgacgcacgtgtctctggatcaggagtacgacccggagctg
tcagccatgtggagccgtctagaggagcagcttgttgctgctgctaaccgaggcatcgtt
cccgttggcttccagcccactcagtgctgcctgaacagccagacagaaaacctgcggcag
ccactggctgtgctgaaggagcctatcattgtggaagtgaccttcaggaaccctctaaag
gtctctctggctctgtccgagctctcactcctctggaggttcagtccacacgtttcgtct
ttatccataagagagccagtgagtgaacagctgactggagaggtcatcggtaatgaagag
accctaacaactccaaatttatcaaaggatgacattgtcaccacagagataatccaggag
tttcatctgaatccggaagaaaccagaatggctcgcctgaagctgcttccacatagaacg
ggtcagctaagcattgtgggagtgacttacaacctgagtttgtcttcgtctgagaccact
gaagagcatcacagcatggagctggtggttcgtggaagacaggatctgaacatccagggc
cccagactgaaccaaaccaaagaggaaaagatgtctgtccgccatggcacagatcgacgt
ctagacgccatcataacacctccaatgcccctcatggaggtgttcttcctgcacttcccc
tctgctctcctgtgtggggagatccgtaaagcctacgtagagttctgcaacgtcggtgcc
gttgctctgtgtggcctgcgggtggcatccacacaccctgagttctttacctttggttgc
aacaacccaacgccttccagcccagcctcggcagaacacggctcagcctataagactttt
gccgccaccgtccagccaggttcagtggtctctgaggttgaggtttgtgctcaggacttc
acccagctgtccggtgtgctagaaatcccaatagatggtgggaccctgcatccaggccag
tccattcagctgcctttgtggctccgaggacctgaccacgaaggagtccatgagatcaac
ttcttgttctactatgagagcacagaaaaaggactcaaagtcagccaccgcgtgttgcgt
cacacggtcttcatctgtgccagtcggtctctgagcgttcaggcttcggcatgtcgcagc
accgctccaccgcaacggtctgcagacagcatgggctgtgacggaacgctggtctttgta
gacgtggagaatgtcaacacgagtgaaggaggcatgcgggagtttcacattgtccaggtg
tccagcagcagtcagcgctggcgccttcacaagtacatcaaccctgacaaggacaatgac
tgtaagctgagcagcagagagaaggccaagctttgcttcagagccacgccatgtgccccc
ctcccagcttccatggactctgtggagaaatacatctttgcagatctgaatcttggaaat
gaacagatcatcagctcctccaccccctgcagagatttcttctttcgctgctgtcgaggc
cttgagcttcagcaaggagagaagacatccaggatggggtccaaaaacaaaactgtctct
acgcctgacaactgtacctctgatcctgcagccattgctaagaaatgcaatgagctggat
ctaaccatcatcgtcatctggaaggcctttgtggtggaagacagcaagcagctgatcctg
gagggccagcttcatgtggcgctgcagaccatcgggaaagaggccacgtctctgatgccc
aaagaggaagctcaggagatggtgttgctgaagttcaagtctgacctcccccctcctgtt
gccctgccctccccagagatgtcccagctcatcaaaaccaacctgcactacccagaaacc
ttctcgcatggctttctccaggacagcctctgcatggttccagtgaccctgactttatcc
aactgctgctcagctcctattgaagttctgatcgacttgagacacagaagcaccagtgcc
gagtctcaggagttccacagcctgttttcctgggtcggccagagtcagtacaagctgctg
ctgaggcctcatgaggtgctgagtctggctctgcgggcctgcttctttcgagctggagtc
tacaacctgaacacggcccgagtttttgctaagccagcccagcagagcagcatgagcgag
tcaaaccagcaagcagcaagtcctgcactaatcatcattaacggcacttga
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