Oryzias latipes (Japanese medaka): 105356944
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Entry
105356944 CDS
T02443
Symbol
cldn20
Name
(RefSeq) claudin-20
KO
K06087
claudin
Organism
ola
Oryzias latipes (Japanese medaka)
Pathway
ola04514
Cell adhesion molecules
ola04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ola00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105356944 (cldn20)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
105356944 (cldn20)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ola03037
]
105356944 (cldn20)
04147 Exosome [BR:
ola04147
]
105356944 (cldn20)
Cilium and associated proteins [BR:
ola03037
]
Other cilia and associated proteins
Stereociliary proteins
105356944 (cldn20)
Exosome [BR:
ola04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
105356944 (cldn20)
Exosomal proteins of colorectal cancer cells
105356944 (cldn20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
Motif
Other DBs
NCBI-GeneID:
105356944
NCBI-ProteinID:
XP_011488809
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All DBs
Position
22:complement(16043363..16055117)
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AA seq
261 aa
AA seq
DB search
MQPGEDDGRGVSNTDLKRSMASTGMQIFGFVLALLGIMGATLATLLPNWKVSADVGSNII
TAISQMQGLWMDCTWYSTGMFSCTLKYSVLSLPAYLQTARTTMVLCCVLAAMGLCLASLG
LKCTRWGGGRRSKRHAAIASGGCFVAAGFLCLVPASWFTKEVITSFLDSSVPESNKFEPG
GAVYVAFVSAGFLFVGGSIFCMSCSGKRHGPQDLILLPPPDKLLLQQQQQQLLQQQQELQ
HQYCSLSPLDNKTGYSLQDYV
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctggagaggacgacggcagaggcgtcagcaacactgacctgaagcggagcatg
gcatccacaggaatgcagatttttggatttgtcctggcgctgctgggcatcatgggtgcc
actctggccaccctgctgcccaactggaaggtcagtgcggatgtgggctccaacatcatc
actgcgatctcccaaatgcagggcctgtggatggactgcacgtggtacagcaccgggatg
ttcagctgcacactgaagtactcggtgctgtcgctccctgcgtatctgcagactgctcgc
accaccatggtgctgtgctgcgtgctcgccgccatgggcctctgcctggcatccctgggt
ctaaaatgcacacgctggggaggaggacggcgctccaagcggcacgctgctatcgctagt
ggaggctgctttgttgctgcaggctttctgtgcctggtgcccgcttcgtggttcaccaag
gaggtcatcaccagcttcctggactccagcgtgcccgagagcaataagtttgagcccgga
ggtgccgtgtacgtggcctttgtttcagcgggattcctttttgtgggggggtccatcttc
tgcatgtcttgctcggggaagaggcatggccctcaggacctgattctgctccctccgcct
gacaaactgctgctccagcagcagcagcaacagctactccagcagcagcaggagctccag
caccagtactgctcactctccccattagacaataagacaggctacagccttcaggattat
gtataa
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