Oenanthe melanoleuca (Eastern black-eared wheatear): 130254434
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Entry
130254434 CDS
T09236
Symbol
PRPF19
Name
(RefSeq) pre-mRNA-processing factor 19
KO
K10599
pre-mRNA-processing factor 19 [EC:
2.3.2.27
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma03040
Spliceosome
oma04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130254434 (PRPF19)
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130254434 (PRPF19)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oma03041
]
130254434 (PRPF19)
04121 Ubiquitin system [BR:
oma04121
]
130254434 (PRPF19)
03400 DNA repair and recombination proteins [BR:
oma03400
]
130254434 (PRPF19)
Enzymes [BR:
oma01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130254434 (PRPF19)
Spliceosome [BR:
oma03041
]
Complex B
Other components
Prp19 complex
130254434 (PRPF19)
Complex C
Prp19-CDC5 complex
130254434 (PRPF19)
Ubiquitin system [BR:
oma04121
]
Ubiquitin ligases (E3)
U-box type E3
130254434 (PRPF19)
DNA repair and recombination proteins [BR:
oma03400
]
Eukaryotic type
Other factors with a suspected DNA repair function
PSO4 complex
130254434 (PRPF19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Prp19
ANAPC4_WD40
NBCH_WD40
U-box
PROPPIN
Cytochrom_D1
eIF2A
RMC1_N
Ge1_WD40
Nup160
zf-Nse
DUF1830
GP3
ATG16
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
130254434
NCBI-ProteinID:
XP_056349923
LinkDB
All DBs
Position
5:complement(8839741..8843897)
Genome browser
AA seq
504 aa
AA seq
DB search
MALICSISNEVPEHPCVSPVSNHVYERRLIEKYIAENGTDPVNNQPLSEEQLIDIKVAHP
IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGLIVPQAVPSAQPNVAGAGEAMDLGELAGMTPEIIQKLQDKA
TVLTTERKKRGKTVPEELVKPEELSKYRQVASHVGLHSASIPGILALDLCPSDTNKILTG
GADKNVIVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCVQ
VVRAHEGSVTGLSLHATGDYLLSSSDDQYWAFSDIQTGRVLTKVTDESSGCALTCAQFHP
DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD
LRKLKNFKTLQLDNNFEVKSLIFDQSGTYLALGGTDVQIYICKQWTEILHFTEHSGLTTG
VAFGHHAKFIASTGMDRSLKFYSL
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcgctcatctgctccatttccaacgaggtcccggagcacccgtgtgtgtcgccggtg
tccaaccacgtgtacgagcggcggctgatcgagaaatacatcgcagagaacggcaccgac
cctgtcaacaaccagcccctgtccgaggagcagctcatcgacatcaaagtcgcccacccg
atccgccccaagcccccctcggccaccagcatcccggccatcctgaaagcgctgcaggac
gagtgggatgctgtcatgctgcacagcttcacgctgcggcagcagctgcagaccacgcgc
caggagctgtcccacgccctgtaccagcacgatgccgcctgcagggtcatcgcccgcctc
accaaggaggtcacagccgccagagaagctctggccactctgaagcctcaggccgggctc
atcgtgccccaggcagtgccatcagcgcagcccaacgtggctggtgctggcgaggctatg
gatctgggagagctggcaggaatgaccccagagatcatccagaagctccaagacaaggca
acggtgctgaccacggagcgtaagaagaggggcaagacagtcccagaggaactcgtgaag
ccggaggagctcagcaagtaccggcaggtggcctcacatgtggggctgcacagtgccagc
atcccaggaattcttgccttggatctgtgtccttccgacaccaacaagatcctcactggt
ggagccgacaaaaacgtcattgtgtttgacaagagctcagagcagatcctggccacgctc
aagggccacaccaagaaagtcaccagcgtcgtcttccacccatcccaggagttggtgttc
tcggcttctcccgacgccacgatccggatctggtccgttcccaacgcctcctgcgtgcag
gtggtccgtgcccacgagggctccgtgaccgggctcagcctccacgccacgggtgattac
ctgctcagctcctcggatgaccagtactgggctttctcggatatccagacgggccgtgtc
ctcaccaaggtgacggatgagagctctggatgtgctctgacttgtgcccaattccatccg
gacgggctcatttttgggacaggaacaatggattcccaaataaagatctgggatctgaag
gaacgcaccaacgtggccaacttcccgggacactctggccccatcaccagcatcgccttt
tctgaaaacggatactacctggccacggcagccgacgactcctcggtcaaactctgggat
ttgaggaagctcaagaacttcaagacattgcagctggataacaactttgaggtgaagtcc
ctgattttcgaccagagcgggacctatctggctctgggcgggaccgatgtccagatctac
atctgcaagcagtggaccgagatcctccacttcacagagcacagtggtctgaccacagga
gtggcctttggccaccatgccaagttcatcgcttccacaggcatggatcggagcctcaag
ttctacagcctgtag
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integrated database retrieval system
