Oenanthe melanoleuca (Eastern black-eared wheatear): 130260597
Help
Entry
130260597 CDS
T09236
Symbol
TSEN54
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA-splicing endonuclease subunit Sen54
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oma03016
]
130260597 (TSEN54)
Transfer RNA biogenesis [BR:
oma03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
130260597 (TSEN54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
130260597
NCBI-ProteinID:
XP_056362128
LinkDB
All DBs
Position
18:6630272..6639383
Genome browser
AA seq
603 aa
AA seq
DB search
MGDLGGTAGTCGTGEEEAPAGSTAEGAGEVTRGTGPGEASQQPLVRGSGXGTAVREEREG
TGRPSGRCSPGLSAAVPSLTAPLSPRSTAEQPEGRQAPRSPRGQKDFLPDGSARQAERLR
RCCEEQWRLLCEERPEPRNLVKAEWKPEQGIVELKSPAGKFWHTMGFSERGKQCLLPEEA
LYLLECGSVQLFYRDVPLSIQEAYETLLCQEAVSLSHYQVFSHLKQLGYIVLRFDPSTVP
SPYERQLNLESHCKSSGKHHRKRRRSSSPRLHEKRHKVYEDLPEAEGTSRKDGDDYGDSI
PVDEKPLSVQPKESDAGSAEGESMPVPLDTEQKDSLSFSSRQAGDQKESSTGTQAPRWDF
STITFPNVASDQPCTHLPSPDNRLLPENVLGRELDAAAWCTRINQKQEKLSRKERKQRER
ESRYKSSVNADQEVRQCSNWQEYKALLQQRRQQRVWKRPSHLWEQAVTPLLRPEEVTSPA
ELLQQISVLQPSHILDGASRLQEDPEAMRIDFNVYQADAVAKFKKTNPGKPHVRMCVRSC
SRQSKEGGNAVLPSFDEQIPSLRALKQVTYLSGDVPLVFALVDHGEITFYSLKEFKLPVD
VNH
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgggggacctgggaggcactgccggaacctgcggtaccggggaagaggaggcaccggcg
ggaagcaccgctgagggggccggggaggtgacccgcggtacgggccctggggaggcatcg
cagcaacccttggtacggggctccgganggggtaccgcagtccgggaggagcgggaaggc
accgggaggccgagtgggcgctgcagtccggggctgtcggccgctgtcccgtccctcacc
gccccgctgtcgccccgcagcacggcggagcagccggagggtcgccaggccccgcggagc
ccccgcgggcagaaggatttccttcccgacggctcggcccggcaggccgagaggctgcgg
cgctgctgcgaggagcagtggcggctgctgtgcgaggagcgcccggagccgaggaatctg
gtgaaagctgagtggaagccagagcagggcatcgtggagctgaagtcccctgcggggaag
ttctggcacaccatggggttctcggaacgaggcaaacagtgtctgctgcctgaggaggct
ctgtacctgctggagtgtggctctgtccagctcttttacagagatgtgcccctgtcaatc
caggaagcctatgagaccctgttgtgccaggaggcagtgagcctgtcacattaccaggtg
ttcagccacttgaagcagctgggttatattgtactgagattcgaccccagcactgtcccg
tctccctatgagaggcagctgaacttggaaagccactgcaagagctctgggaaacaccat
cgcaagaggaggagaagttccagcccccggttgcatgagaagagacataaagtatatgag
gaccttccagaagctgaagggacctcccgcaaagatggagatgactatggagactccatt
cctgtggatgaaaagcccttgtcagtacagccaaaggaatcagatgctggcagtgcagag
ggagagtcaatgccagttcctcttgatacagaacaaaaggactctctgagcttctccagc
aggcaggctggagaccagaaggagagcagcactggcacccaggcaccccgctgggatttt
agcaccatcacgtttcccaacgtggcctcagaccagccatgcacacacctgccctcccct
gacaacaggctcctgccagagaacgtgctgggcagggagctggatgcagctgcctggtgc
acacggatcaaccagaaacaggagaagctgtcacggaaggagaggaagcagcgggagagg
gagagcaggtacaagagcagtgtcaatgctgaccaggaggtgaggcaatgctccaactgg
caggagtacaaagccctcctgcagcagaggagacagcagagagtctggaaacgaccatca
cacctctgggagcaagctgtcacaccactgctgcggccagaagaagtgacctcaccagct
gagctcctccagcagatcagtgtgttgcagccctcccacatcctggatggagcctcccgg
ctgcaggaggacccagaggccatgaggatagacttcaacgtgtatcaagcagacgctgtg
gccaagtttaagaagacaaaccctgggaagccccatgtcaggatgtgtgttcggagctgt
agtagacagagcaaggaaggtggtaatgcagttttaccaagctttgatgagcagatccca
tccctgcgggctttgaagcaggtgacgtatctgagtggggacgtccctctggtctttgca
ctggtggatcatggagaaatcaccttctattcactgaaggagttcaagcttcctgttgat
gttaatcactga
DBGET
integrated database retrieval system
