Oenanthe melanoleuca (Eastern black-eared wheatear): 130260628
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Entry
130260628 CDS
T09236
Symbol
ITGB4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Pathway
oma04510
Focal adhesion
oma04512
ECM-receptor interaction
oma04810
Regulation of actin cytoskeleton
oma04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130260628 (ITGB4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130260628 (ITGB4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130260628 (ITGB4)
04810 Regulation of actin cytoskeleton
130260628 (ITGB4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oma04147
]
130260628 (ITGB4)
04515 Cell adhesion molecules [BR:
oma04515
]
130260628 (ITGB4)
04090 CD molecules [BR:
oma04090
]
130260628 (ITGB4)
Exosome [BR:
oma04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
130260628 (ITGB4)
Exosomal proteins of bladder cancer cells
130260628 (ITGB4)
Cell adhesion molecules [BR:
oma04515
]
Integrins
Integrin beta subunits
130260628 (ITGB4)
CD molecules [BR:
oma04090
]
Proteins
130260628 (ITGB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Pur_ac_phosph_N
Calx-beta
I-EGF_1
PSI_integrin
EGF_2
SEA
Motif
Other DBs
NCBI-GeneID:
130260628
NCBI-ProteinID:
XP_056362184
LinkDB
All DBs
Position
18:6801144..6831161
Genome browser
AA seq
1857 aa
AA seq
DB search
MRRKRMNVLPGACARLLLLSLLCTTSLCQWSKNNRCVLSRARSCTECIRVDKDCSFCTDE
SFEEPRCDLRENLLRAGCGQASVVYSQGQMGTLQNSSINTSLQRTQVSPQAMFMRLRAGE
EMSFDMDVFQPKESPVDLYILMDFSYSMSDDLDNLKSMGHNLADFLQALTSNYTIGFGKF
VDKVSSPQTDMRPEKLREPWHNADSPFSFRNVIRLTSNISDFSRELRKERISGNLDAPEG
GFDAILQTAVCKDKIGWRKDSTHLLVFSTESAFHYEADGTNVLAGILARNDEQCHLDSHG
TYVYDTRQDYPSVPTLVRLLGQHNIIPIFAVTNHSYSYYEKLHKYFPISEIGVLQEDSSN
IVELLRTAFERIRSKMDIRADFTPRALKTEFTSSMFEKTESGSFHITRGKVGKFHMHVKA
LEFVGGQHVCSLPERERQGVIHVKPTSLSDSLTVSAAVICDVCPCEQQQELDSPKCSFHG
NFVCGQCICHPGWRGDTCDCSPASSPNNEACIRPGDVEPCSGRGECLCGKCQCYSEDQTV
RFDGAFCEFDVLQCPRTSGFLCNDRGRCSRGACVCESGWEGPSCECPTSNDTCIDSRGGI
CNNHGRCECGRCICDMASLYTSSTCEISYSLGFQAVCESIRDCVRCQTWGTGNLKGNCSS
CQLQIQMVEELKKEEGGEYCSFQDEDDDCTYHYNLEGDPSVLPNTTVRVQKNKECPPGSF
LWLIPLLIFLILLLGLLLLLCWKFCACCKACLALLPCCARGRTVGFKEDHYMLRHSLMSC
DHLDTPLVRSGSLQGRDTVRWRIHNNAHRQGGTPPAPSPKDLVPYGLSLRLARIFTQNLG
RQETREYEQLRKEVEENLNDIFKHIPGCHKVQQTKFRLQPNSGKRQEYTIVDTVLTAPHS
AKPDIIKVVEKHVSHEAFNELKVAPGYYTVTSDQDAEGMVEFQEAVELVDVRVPLFIRDD
DDDEKQLQVEALEVPNGIAKIGRRVVNITIIKEQASSLITFLQPAYSHSRFDKLAKIPVL
REIIDNGKSQVTYRTRDLTAKNGRDYILTEGELVFQPGETRKEVQVPLLELTEIDTLLNN
CQLKQFAIDLLHPKYGAKIGRYPQTTVTIADPELVDGVPSMTGLAQVPQSPKGRLSAPLN
PNARALSSREISFNWFPPPGKPLGYKVKYWIQGDPESEAHLIDVKAPSAELTNLYPFCDY
EMQVCAYNAMGEGAYSDIVQCRTLEEVPSEPGRLAFNVVSSTVTQLSWAEPAETNGDITA
YEVSYGPVNEDNAPAGPMKKVLVEDPKKRMVLIENLRESQPYRYTVKARNGAGWGPEREA
TINLATQPKRPMSIPIIPDVPIIDAEGGEDYDSYLMYSTDVLRSPAGSKRPSVSDDSGSR
WKFVPLLGEELDLRRITWRLPPETIPRLSGSSRLSSDTEGLLPEEDSARSSGTPRPQAEH
LLNGRVDFSFPGSGSGSGTLTRTANTSYHQLSSHVHQEHRVMGSSSLTRDYSTVLLGHDS
PGTLLPPIYEDAGRTLLWPRDVGFRSRAKVKGYYPSIGCRDSVIMADGSAGMCKYIDPRK
ALGIPDTPTRLVFSALGPTSLKVSWQEPRCDKELQGYSVHYQLLSGGEVHRITIPNPRQN
SVVVEDLLPNHSYIFKVKAQSEEGWGPEREGVITIESQVDPQSPLSPVPGTPFTLSTPCA
PGPLVFTALSPDSLHLSWERPREPNGPILGYRITCEMLHGGGEPRTIYVEGDNLETTLTV
PHLSENVPYKFKVQANTTQGFGPEREGLITIESQDRGAFSQFGGQQYTREVYKFPTEYTT
KTSISHSSLDPHFTDGVLVSTQRVENSSSTLTQEFVSHTVLASGTLTQHLERQFYEA
NT seq
5574 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggaagaggatgaatgtgctgccaggggcgtgtgccaggctgctgctcctgtcc
ctgctctgcaccaccagcctctgccaatggagcaaaaacaatcgctgtgtgctgtcccgg
gccaggagctgcaccgagtgcatccgtgtggataaggattgctccttctgcactgatgag
agcttcgaggagccgcgctgtgacctgcgggagaacctgctgcgcgcgggctgcggccag
gccagcgtcgtctacagccagggccagatggggacactgcagaattccagtatcaacacg
tccctgcagaggacccaggtgtccccccaggccatgttcatgcggctgcgggctggggag
gagatgagcttcgacatggatgtcttccagcccaaggagagccctgtggatctctacatc
ctcatggacttctcctactccatgtctgatgatctggacaacctcaaaagcatggggcat
aacctagctgacttccttcaagccctgacttccaattacaccattggatttggcaagttt
gtggacaaagtctcatcccctcagacagacatgagacctgaaaagctgcgggagccctgg
cacaacgcggactcgcccttctccttcaggaacgtcatccgcctgaccagcaacatcagc
gacttcagccgcgagctgcgcaaggagcgcatctcgggcaacctggacgcgcccgagggc
ggcttcgacgccatcctgcagacagctgtgtgcaaggataagattggctggagaaaggac
agcactcacctgctcgtgttctccaccgagtctgcctttcactatgaagctgatggtacc
aacgtcctggcagggatcctggcgaggaacgacgagcagtgtcacctggacagccacggc
acctacgtgtacgacacccggcaggactatccctccgtgcccaccctggtgcgcctcttg
ggccagcacaacatcatccccatctttgctgtcaccaaccactcctacagctactacgag
aagctgcacaagtatttccccatctctgagatcggggtgctccaggaagactcttccaac
atcgtggagctgctccgcacagcctttgagcgcatccgctccaagatggacatcagggct
gacttcacccccagagccctgaagacagagttcacctcctcaatgtttgaaaagacagaa
tccggctctttccacatcacccgtggaaaagtgggcaagttccacatgcacgtcaaggcg
ctggagttcgttggagggcagcacgtctgcagcctgcccgagagggagcggcagggcgtg
atccacgtcaaacccacgtccctgagcgacagcctcaccgtgtcagccgctgtcatctgc
gacgtgtgtccctgtgagcagcaacaagagctggactcgcccaagtgcagtttccacggg
aactttgtgtgcggacagtgcatctgccacccgggctggagaggggacacgtgtgactgc
tccccggcgtcatcccctaacaacgaagcctgtatccgccccggggacgtggagccgtgc
tcggggaggggcgagtgcctgtgcgggaagtgccagtgctactccgaggatcagaccgtg
cgcttcgacggcgccttctgcgagttcgatgtgctgcagtgcccgcgcacctccggcttc
ctctgcaacgatcgcggccgctgctccaggggcgcctgcgtgtgcgagagcggttgggag
ggcccgagctgcgagtgccccaccagcaatgacacctgcatcgacagccgggggggcatt
tgcaataaccacggcaggtgtgagtgtggcaggtgcatctgtgacatggcctcgctgtac
accagctccacctgtgaaatcagctactccctgggcttccaggccgtgtgtgagagcatc
cgggactgtgtccgctgccagacctgggggacaggcaacctcaaagggaactgcagctcc
tgccagctccagatccagatggtggaggagctgaagaaagaggagggtggtgagtactgc
tccttccaggatgaggatgatgactgcacctaccactacaacctggagggagaccccagt
gtccttcccaacaccactgtccgtgtgcagaagaataaagagtgcccacctgggagcttc
ctctggctcatcccactgctcatcttcctcatcctgctcctggggctgctgctcctgctc
tgctggaagttctgtgcctgctgcaaggcttgcctggccctgcttccctgctgtgcacga
ggtcgcactgttggcttcaaggaggatcactacatgctgcggcacagcctcatgtcctgc
gaccacctggacacgcccctggtgcgcagcgggtcgctgcagggcagggacacggtgcgc
tggagaatccacaacaacgcgcacaggcagggcgggaccccccctgcccccagccccaag
gacctcgttccctacgggctgtctctgaggctggcccggattttcacgcagaacctgggc
aggcaggagacccgggagtacgagcagctgcgcaaggaggtggaggagaacctgaatgac
attttcaagcacattccaggctgccacaaggtccagcagaccaagttcaggttacagccc
aattctgggaaaaggcaggaatacaccatcgtggacacagtgctcactgcccctcactca
gccaagcctgacatcatcaaagtggtggaaaaacacgtttcccacgaggctttcaatgag
ctgaaggtcgcaccgggttattacactgtgacctctgaccaagatgctgaggggatggtg
gagttccaagaggccgtggagctggtggatgtgcgtgtcccgctcttcatcagggacgat
gatgatgatgagaagcagctgcaggtggaggccctggaggttcccaatggcattgcaaag
attgggcgcagggtggtcaacatcaccatcatcaaagagcaagccagcagcctcatcacc
ttcctgcagccagcctattcccacagccgcttcgacaagctggccaagatccctgtcctg
cgggagatcatcgacaacgggaaatcccaggtcacctacaggacccgggacctcaccgcc
aagaatggcagggactacatcctcacggagggtgagctggtcttccagcctggggagacc
cgaaaggaggtgcaggtgcccttgctggagctgacagagattgacaccctcctcaacaac
tgccagctcaagcaattcgccatcgacctcctccaccccaagtacggcgccaagatcggc
cgctacccccagaccacggtgaccattgctgacccagagctggtggatggtgtcccctcg
atgactggcctggcccaggtcccccagtcccccaaaggccgcctgagtgcaccacttaat
cccaatgcccgagccctcagctccagggaaatcagcttcaactggtttcctccaccagga
aagcccctggggtacaaggtgaaatactggatccagggagaccctgagtcagaggcccat
ctcattgatgtcaaagccccatcagcagagctgacaaacctttaccccttctgtgactac
gagatgcaagtctgtgcctacaacgccatgggagaaggggcttactcggacatcgtgcag
tgccgcacgctggaggaggtgcccagcgagcccgggcgcttggctttcaacgtcgtgtct
tccaccgtgacccagctgagctgggctgagcctgcagagaccaacggggacatcacggcc
tatgaagtcagttatgggcctgtcaacgaggacaatgcccccgctgggcccatgaagaag
gtgctggttgaggaccccaagaagcgcatggtgctgatcgagaacctgcgggagtcgcag
ccctaccgctacacggtgaaggccaggaacggcgcgggctgggggcccgagagagaggcc
accatcaacctggccacgcagcccaagcgccccatgtccatccccattatccctgatgtc
cccatcattgatgcagagggaggtgaggactatgacagctacctgatgtacagcacggat
gtgctccgctctccagctggcagcaagaggcccagtgtctctgatgattcaggctccagg
tggaaatttgtgccgctgctgggagaagagctggaccttcgccgcatcacctggaggctc
ccgcccgaaaccattccccggctgtctggcagcagccgcctgtcctcggacaccgagggg
ctgctcccggaggaggacagcgccaggagcagcgggacgccccggccccaagcagagcac
ttgctgaatggccgggtggacttctccttccctggcagtggcagtggcagtggcaccctg
accaggacagccaacaccagctaccaccagctgagctcccacgtgcaccaggagcacagg
gtgatgggcagctcctcgctgaccagagactactccacagtgctgctggggcatgattcc
ccggggacactcctccctcccatctatgaagatgctgggaggacactcctctggccccgg
gacgtgggtttcaggagcagggcaaaggtgaagggttactaccccagcattggctgtcgg
gactctgtaatcatggctgatgggtctgcagggatgtgcaagtacatagaccccaggaag
gctctgggcatccctgacacccccacccggctggtgttctctgcgctgggccccacgtcc
ctcaaggtgagctggcaggagccgcgctgcgacaaggagctgcagggctacagcgtgcac
taccagctgctcagcggaggagaggtgcacaggatcaccatccccaaccccaggcagaac
tcggtggtggtggaggacctgctgcccaaccactcctacatcttcaaggtgaaggcgcag
agcgaggagggctggggccccgagagggagggcgtcatcaccatcgagtcccaggtggac
ccgcagagcccgctcagccccgtgccaggtacccccttcaccctgagcaccccctgtgcc
cctggaccgctggttttcactgccctcagcccggattctctgcatctcagctgggagaga
ccccgcgagcccaacgggcccatcctgggttacaggatcacctgtgagatgctgcatgga
ggaggggagcccaggacaatctatgtggaaggagacaacctggaaaccaccctgactgtg
ccccacctgagcgagaacgtcccgtacaagttcaaagtgcaagccaacaccacccaaggc
tttggaccagagagagaaggcctcatcaccattgaatctcaggacagaggtgctttctcc
caatttggaggacagcaatacacgagagaagtttacaaattccccactgaatacaccacc
aaaaccagtatcagccattcctccctggatccccacttcacagacggggtgctggtgagc
acccagcgcgtggagaactccagcagcaccctgacccaggagtttgtgagccacaccgtg
ctggccagcgggaccctcacccagcacctggagaggcagttctacgaggcctga
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integrated database retrieval system
