Oenanthe melanoleuca (Eastern black-eared wheatear): 130260813
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Entry
130260813 CDS
T09236
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1-like
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
oma
Oenanthe melanoleuca (Eastern black-eared wheatear)
Brite
KEGG Orthology (KO) [BR:
oma00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oma03016
]
130260813
Enzymes [BR:
oma01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
130260813
Transfer RNA biogenesis [BR:
oma03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
130260813
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
Adaptin_binding
DUF3280
Flavodoxin_5
Hydrolase
Hydrolase_6
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
130260813
NCBI-ProteinID:
XP_056362515
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Position
19:complement(9879680..9969720)
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AA seq
720 aa
AA seq
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MDTWSFFHTCLVSIWLHRFYIYSAIAFGISLWIVIQFTTTRTKRKGEKAHGNPSSPEGTA
DKLGNGCAPPQAQEVHVAGVKIFYGSQTGTAKRFAKALAEAVTSLDLPVEVINMGDYDPE
DGLSEEASSRNICVFLVSTYTDGQPPESAAWFCQWLEEAANDFRVGKSFLQGLRYAVFGL
GNSAYVDHYNTVGRRMDRWLWMLSASRIMTRAEGDCNVAQSKHGSIEADFEAWKGKFLTR
LQALCRGEKKPCSGKCKKGKCKSSGEQSKESSDNEHRTSEHENTEAEELFETSSEEEAGG
TDSVIDVEDLGNIMGHMKKAKREQELQEGAAGAGRKEAERREMITPALREALTKQGYKLI
GSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEATPSLACANKCVFCWRHHTNPVG
TEWRWKMDPPEVILQEAIEKHQNMIRQFKGVAGVKAALLEEALAVKHCALSLVGEPIMYP
HINHFIRLLHQHGISTFLVTNAQFPEEIRRLEPVTQLYVSVDASTKESLKRIDRPLFKDF
WQRFLDSLKALSEKQQRTVYRLTLVKAWNVDEVKAYADLISIGKPDFIEVKGVTYCGESS
ASSLTMANVPWHGEVLSFARELARLLPEYGIACEHQHSNCLLLAHCKFQVDGQWRTWIDF
GRFQELVQEHEQSGGCRSFSAAEYTARTPAWALFGAGEGGFDPLQVRFHRRSKAQHVSGC
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggatacttggagcttcttccatacttgcctggtgtccatatggctgcacagattttac
atctattctgctattgcttttgggatcagcctttggattgtcattcagttcaccaccacc
agaaccaaaagaaagggtgagaaagcccatgggaatccctcttcccctgagggaacagca
gacaaactgggaaatggatgtgcccctcctcaggcacaggaggtccatgttgctggagtg
aagattttctatggctctcagactggcacagcaaagagatttgccaaagctctggctgaa
gctgttacttctcttgatttgcctgtggaagtcattaacatgggagattatgatccagaa
gatggtttatctgaggaggccagcagcaggaacatctgtgtgttcctggtgtccacctac
acggatgggcagcccccagagagtgcagcctggttctgccagtggctggaagaggcagcc
aatgatttccgtgttgggaagagcttcctgcagggtctgagatacgctgtgttcggcctg
gggaactcggcctatgtggatcactacaacacagttggaaggaggatggacaggtggctg
tggatgctcagtgccagcaggatcatgactcgtgctgagggggactgcaacgtggcccag
agcaagcatggcagcatcgaggctgactttgaggcctggaaaggcaaattcctcactcgg
ctccaggcgctctgcagaggggaaaagaaaccctgcagtgggaagtgcaagaaaggaaag
tgcaaatcttcaggggagcagagcaaggaaagctcagacaatgaacataggacgtcagaa
catgagaacactgaggcagaggaattgtttgaaaccagtagtgaggaggaagctggaggc
acagattctgtcatcgatgttgaagatcttggcaatatcatgggccacatgaagaaagca
aagagagagcaggagctgcaggaaggagctgctggagctgggaggaaggaggctgagagg
agagagatgatcaccccagccctgagggaggcactcacaaaacaaggttataaactcatt
gggagccattctggggtgaagctctgccgatggacaaagtcgatgctgcgtggccgcggg
ggctgctacaagcacaccttctatggcatcgagagccaccgctgcatggaggccaccccc
agcctggcctgtgccaacaagtgtgtcttctgctggagacaccacacgaaccccgtgggc
accgagtggcgctggaagatggacccgcccgaggtgatcctgcaggaggccattgagaag
caccagaacatgatcaggcagttcaaaggtgtggcaggagtgaaggcagctctcctggag
gaggccctggcagtgaagcactgtgccctgtccctggtgggggagcccatcatgtaccca
cacatcaaccacttcatcaggctgctgcaccagcatggcatctccaccttcctggtcacc
aacgctcagttccctgaggagatcaggaggctggagcctgtgacccagctctatgtcagt
gtggatgccagcaccaaggagagcctgaagaggattgacagacccctcttcaaggacttc
tggcagaggtttctagacagcttaaaggccttgtctgaaaagcaacaacgcactgtttat
aggctgaccctggtgaaagcctggaacgtggatgaagtcaaggcttatgctgacctgatc
tccattgggaaaccagacttcattgaggtcaagggtgtgacatactgcggggagagctct
gccagcagcctgaccatggccaacgtgccgtggcacggggaggtgctgagcttcgcgcgg
gagctggcgcggctgctcccggagtacggcatcgcctgcgagcaccagcactccaactgc
ctgctgctggcccactgcaagttccaggtggatggccagtggaggacctggattgacttt
ggccgtttccaggagctggtgcaggagcacgagcagagtggtggctgcaggagcttctca
gcagccgagtacacggccaggactcctgcctgggccctctttggggctggggaggggggc
tttgaccccctgcaggtgagattccacaggaggagcaaggcacagcacgtctcgggctgc
tga
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