Onychostoma macrolepis: 131541279
Help
Entry
131541279 CDS
T09350
Symbol
exosc1
Name
(RefSeq) exosome complex component CSL4 isoform X1
KO
K07573
exosome complex component CSL4
Organism
omc
Onychostoma macrolepis
Pathway
omc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
131541279 (exosc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omc03019
]
131541279 (exosc1)
Messenger RNA biogenesis [BR:
omc03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
131541279 (exosc1)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
131541279 (exosc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
131541279
NCBI-ProteinID:
XP_058632921
LinkDB
All DBs
Position
01:11108495..11113779
Genome browser
AA seq
197 aa
AA seq
DB search
MSPMKLCVPVHTGERLCSTEDCIPGTGTYLRHGYIFASLAGYVLRKNEGEELPVISVVRE
TEAQLLPDVGAIVTCKVTSINPRFAKVHILYVGSTPLKDRFRGTIRREDVRATEKDKVET
YKSFRPGDIVLAKVISLGDVQSNYLLTTAENELGVVVAHSEAGAQMVPISWCEMQCPRTH
AKEFRKVARVQPEYLQA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcccatgaagctgtgtgttccagttcacacaggtgaaaggctctgcagcacggag
gactgtatccctggcaccggcacgtatctgcggcacggctacatcttcgcttcgctcgcg
ggatacgtgctgagaaagaacgagggagaggagctcccggtgatttcagtcgttagggag
acagaagcacagctcttgcctgacgtcggtgccatcgtcacctgtaaggtgacgagtatc
aacccacgatttgctaaagtccacatcttatatgtggggtcgacaccgctaaaagacagg
tttagaggcacgatcagaagagaagacgtgagagcaacggagaaagacaaggtggagacg
tacaaaagcttcaggccaggcgacattgtccttgcaaaagtgatctctttgggcgacgtg
cagtcaaactacctgctgaccacagcagagaacgagttgggcgtagtcgtggcccacagc
gaggcgggcgctcagatggtgcccattagctggtgtgagatgcagtgtccacgcacacac
gccaaagagtttcgcaaggtcgcacgggtacagccggagtacctgcaggcctga
DBGET
integrated database retrieval system
