Onychostoma macrolepis: 131548041
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Entry
131548041 CDS
T09350
Symbol
vps11
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 11 homolog
KO
K20179
vacuolar protein sorting-associated protein 11
Organism
omc
Onychostoma macrolepis
Pathway
omc04140
Autophagy - animal
omc04148
Efferocytosis
omc05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omc00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131548041 (vps11)
04148 Efferocytosis
131548041 (vps11)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
131548041 (vps11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omc04131
]
131548041 (vps11)
Membrane trafficking [BR:
omc04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
131548041 (vps11)
Hops complex
131548041 (vps11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
VPS11_C
zf-C3HC4_2
zf-rbx1
zf-RING_2
zf-C3H2C3
zf-C3HC4
zf-ANAPC11
ADIP
Glyco_transf_10
zf-RING_5
DUF6543
zf-RING_UBOX
Kbp-5
Motif
Other DBs
NCBI-GeneID:
131548041
NCBI-ProteinID:
XP_058644932
LinkDB
All DBs
Position
10:9450740..9457824
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AA seq
927 aa
AA seq
DB search
MAAFLQWRRFVFFDKETVKDPSENGKNFQLPVGIAACDSGRGHIVLGDMDGQIWFLTRSL
QLSGFQAYKLRVTHLYQLKQHNILVSVGQDEPGINPLVKVWNLDKKDSGSPLCTRIFPAI
PGNKPTEVSCLSVHENLNFMAIGFTDGSVVLTKGDITRDRHSKTLSLHEGNCPITGLAFR
QAGKVTHLFVATLEKVQCYTLSVKEYPRIELDTHGCALRCSALTDPSQDSQFIVAGDDCV
YLYQPDERGPCFAFDGHKLLTHWHRGYLLLLTHNNKSPSKSDYGSRQTSPTEKHILTIYD
LDNKFIAYSAVFDDVIDVLAEWGSFYVLTRDKTLYMLQEKDXQTKLEMLFKKNLFVMAIN
LAKSQHLDNDGLSEIFRQYGDHLYVKGDHDGAIQQYIRTIGKLEPSYVIRKFLDAQRIHN
LTAYLQALHRQSLANADHTTLLLNCYTKLKDSSKLEEFIKSNESEVHFDVEIAIKVLRQA
GYHSHAVFLAERHMHHEWYLKIQLEDLKNYQEALRYIGRLPFDQAESNMKRYGKILMHHV
PESTTILLKRLCTDYHPSKDSTDRDSLDRPVENKANPEEFIPVFANNPRELRAFLEHMIE
VDPFSPEGVYDTLLELRLQDWAHEQDPGKKKVLQEAALSLLRSDNTVFDKALVLCQMHNF
KEGVLYLYEKGKLYQQIMHYHMQNEEYGKVVEACKRYGDSEVCLWEQALGYFARKEENCK
AYISEVLQHIDENNLMPPLLVVQTLAHNSTASLSVIKDYLINKLERETQQIEEDERKIRQ
YREETAHLRAEIQELKTCAKIFQKTKCSMCNSPLELPSVHFLCNHSFHQHCLESFAESEA
ECPTCTPENRKVMDMLRAQDQKRDLHDHFHRQLKCSNDGFSVIADYFGRGVFNKLTLITD
PPGGKSGAGNLEAEFNRDLLINTKRNV
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttcttgcagtggagacgttttgtgtttttcgataaagaaacggtgaaagat
ccgagcgaaaatgggaaaaatttccaactaccggtgggaatagcggcctgtgattcaggt
cgaggacacattgtgcttggagatatggatggacagatctggtttttgacccgctccctg
cagctgtccggctttcaggcttataagctgcgcgtgacacacctgtaccagctgaaacaa
cacaacatcctggtgtctgtgggtcaggatgagcctggcatcaatcctctggtgaaggtg
tggaaccttgataagaaagacagcggcagtcctctgtgtacccggatattccctgccata
cctggaaacaaacctactgaagtgtcttgtctcagtgtacatgaaaaccttaatttcatg
gctataggttttacagatggcagtgttgtgctgacgaagggcgacatcaccagagacaga
cacagtaaaactctcagcctccatgagggcaactgtccaatcacaggcctagctttccga
caggctggcaaagtcacacacctgtttgtcgccactttagaaaaagtgcagtgttacaca
ttatcagtgaaagagtaccctcgtatagaactggacacacacggctgtgccctccgctgc
tctgcgctcacagacccctcgcaggactcacagttcatagtggccggagatgactgtgtg
tatttgtaccagcccgacgagagaggaccctgtttcgctttcgatgggcacaaacttcta
actcactggcacagaggatacctgctgctgctcacacacaataacaagtcacccagcaaa
tctgattatggcagcagacagacatcccctacagaaaagcacatcctgaccatttacgac
cttgacaacaagttcatcgcttacagtgcggtgtttgatgatgtcattgacgttctggca
gaatggggctctttttatgtcctaacgagggacaaaacactgtatatgctgcaagaaaaa
gacnnacagaccaaactagagatgctgtttaagaagaacctgtttgtgatggccattaac
ctggctaaaagtcaacatctggacaatgacggtctgtctgagatattcagacagtatgga
gaccatctctacgtcaaaggggatcacgatggagctattcagcagtatattcgcaccatt
gggaagctcgagccctcatacgtaatccgtaaatttttggatgcacagaggatacataac
ttgacagcctacctacaggccctccacaggcaatcgctggccaacgctgaccacactact
ctgctgctcaactgttacaccaaactgaaggacagctccaagctggaagagttcataaag
agcaatgaaagtgaggtgcatttcgatgttgaaattgccatcaaggtgttacgtcaggct
ggttatcacagtcacgccgtgtttctggcagagcgacacatgcaccatgaatggtatcta
aagatccagctagaggatttgaagaattatcaggaggctttacgctacataggaaggttg
ccgtttgatcaggcagagagtaatatgaagcgttatggaaaaattctaatgcaccatgtg
cctgaaagcaccaccatcctcttaaaacgcctttgcaccgactatcaccccagcaaagac
tcaaccgacagggacagcctggacaggcctgtggaaaacaaggccaatccagaagagttc
atcccagtctttgccaataacccacgagagctgcgagcgttcctggaacacatgatcgag
gtggatccgttctcacctgagggagtttatgacactctgctagagctcagactacaggac
tgggcacatgagcaggacccagggaagaagaaagtcctgcaggaggcagcactgtccctg
ctgaggagcgacaatactgtgtttgacaaagccctggtgctctgccagatgcacaacttc
aaggaaggagtgctgtatctgtatgaaaagggcaaactgtaccagcagatcatgcattac
cacatgcagaatgaggagtacgggaaagtcgtggaggcctgtaaacgttatggggacagt
gaggtgtgtttgtgggaacaggctctgggctattttgcacgcaaagaagaaaactgcaag
gcctacattagtgaagtcctgcagcacattgatgaaaataacttgatgcctccacttctg
gtggtgcagactttggctcataattccacagcatctctgtcagtcataaaagactacctg
ataaataaactggagcgggagacccagcagattgaggaagatgaaaggaagattcgacag
tatagagaggaaacggcccatcttcgtgctgagatacaggaacttaaaacctgtgcaaag
atcttccagaagaccaagtgcagcatgtgcaacagcccattagagctgccatctgtgcac
ttcctgtgcaaccactctttccatcagcactgcctggagagctttgcagagagcgaggcc
gagtgccccacctgcacccctgagaacaggaaagtgatggacatgttgcgtgcacaagat
cagaaacgagatctgcacgatcatttccacagacagctcaaatgttctaatgatggcttc
tcagtcatcgctgactattttggccgtggagtgtttaacaaactcactctgataacggat
cctcctggaggaaagagtggagctgggaatctggaggctgaattcaacagagatctgctc
attaacaccaagagaaatgtttga
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