Oryzias melastigma (Indian medaka): 112148487
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Entry
112148487 CDS
T07439
Symbol
syn1
Name
(RefSeq) synapsin-1 isoform X1
KO
K19941
synapsin
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oml04131
]
112148487 (syn1)
Membrane trafficking [BR:
oml04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
112148487 (syn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Synapsin_C
Synapsin
Synapsin_N
RimK
Motif
Other DBs
NCBI-GeneID:
112148487
NCBI-ProteinID:
XP_024131415
Ensembl:
ENSOMEG00000000935
LinkDB
All DBs
Position
LG9:25150400..25161062
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AA seq
661 aa
AA seq
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MNYLRRRLSDSNFMSNLPNGYMGDLQRPDPPQQSPAVSPGPAERRQSTGPQPQPHPQQQQ
QQQPQQQQSAGAGSSFFSSISNAVKQTTAAAAATLSEAADRAGGFSNAKILLVIDDQQTD
WVKIFRGRKVHGEFDIKVEQAEFSEINLVVNATGSFNVDLDAIRNGHKVTKSFKPDFVLI
RQHAFSMDKNGDHRNMVIGLQYAGVQSVNSLHSVYNFCDKPWVFAQMSRLHKQLGPEEFP
LIEQVYYPNHKEMITSPRFPVVVKMGHAHSGMGKVKVDNQYDFQDIASVVALTKTYATSE
PFIDAKYDVRIQKIGNNYKAYMRTSVSGNWKTNTGSSMLEQVAMSDKYRMWVDSCAEIFG
GLDICAVEALHGKDGRDYIIEVDDCSMPLIGDQQDEDRVQIADLVLSKMNQTVPRTSSSS
AVRGSAGQQTQKAVSPQPVSQPKVPQASERPSPQGGPQQSPPSQQRPQPQGQPPAQAKQS
GASSSTADPSTQAKAAAAQQRPAGQGAPQRSQGGSPQAQRQQSASQQQKPPAGSPGQKPV
GAQSQPQKPGPVPRQQSQGGSAPPRAPGPQGRPGGPTTQQPRPAAQGQGGPGGRPPIQQK
PHPPQKPNQESASPQLNKSQSLTNTFNLPETPAPRASLSQDEVKAETIRNLRKSFASLFS
D
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgaactacctacgtcgacggctctcggacagcaatttcatgtccaacctccccaatggt
tacatgggcgacctccaacgccccgacccgccgcagcaaagccccgcagtgtcgcccggg
ccggcggagcggcggcagtccaccggcccgcagcctcagccgcatccgcagcagcagcag
cagcagcagccgcagcagcagcagtccgcaggtgcgggctccagctttttctcctccata
tccaatgctgtcaagcagaccaccgccgctgcggctgccaccctctccgaggcggcggac
cgagcgggcggcttcagcaacgccaagatcctcctggttatcgacgaccagcagactgac
tgggtgaagatcttcagaggaagaaaagtccatggggaatttgacattaaagtggaacag
gcagagttctctgaaatcaacttggtggtcaacgccacaggaagcttcaatgtggacctt
gatgcaatccgcaatggccacaaggttacaaaatcctttaagccagacttcgtgctgatt
agacagcacgccttcagcatggacaaaaacggagaccaccgcaacatggtgatcggactt
cagtacgcgggggttcagagcgtgaactctctgcactccgtctacaatttctgcgataag
ccatgggtgtttgctcagatgtcaagactccacaagcagctgggtccagaggagttccca
ctgatcgagcaggtttactatcccaaccacaaagagatgataacctcccctcggttccct
gttgtggtcaagatgggccatgctcactctggaatgggaaaggtcaaagtggacaatcag
tatgactttcaagatattgccagtgtcgtggcactgaccaagacctatgcgacatcggag
ccttttattgatgcaaaatacgacgttcgcattcagaagatcggtaacaattacaaggcc
tacatgaggacgtctgtttctgggaactggaaaactaacactggctcgtccatgttggag
caggtggccatgtcagacaagtacaggatgtgggtggattcttgtgcagagatctttggc
ggattagatatttgtgcagtggaggctcttcatggtaaagatgggagagattacattata
gaggtggacgattgctcgatgccgctcattggggaccaacaggatgaagatcgggttcag
atcgcagaccttgtgcttagtaaaatgaaccagactgttccgcgcacttctagttcttcg
gcagtccggggatcagcaggacagcaaacacagaaagcggtttctcctcaacctgtctca
cagcctaaagtaccacaggcttcagagcgcccctcacctcaaggtggtcctcagcagagt
cctccctcccagcagcgccctcagcctcagggccagcctccagcacaggccaagcaatca
ggtgccagctcgtctactgctgaccccagcacacaggccaaagcagctgcagctcagcaa
cggccagcaggtcagggcgctcctcaaagaagccagggaggttctcctcaggcccagagg
caacagtctgcatcccagcaacagaaacctcctgcaggaagccctggccagaagcctgtc
ggtgcacaatcgcagccacagaaacctggtccagtgcctagacagcaatcacaaggcggg
tcggcgccgccgagggctcctggcccacaaggtcgcccaggcggacccaccacccagcaa
ccacgacctgctgctcagggccagggtggcccaggagggcgcccccctattcagcagaag
cctcatcctccacagaaacccaatcaggagagcgcctcaccacaactaaacaagtcccag
tctcttaccaataccttcaaccttccagaaaccccagcgccacgagccagccttagccag
gacgaggtgaaggctgaaaccatacgcaatctacgcaaatcttttgccagtctcttctca
gactga
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