Oryzias melastigma (Indian medaka): 112148494
Help
Entry
112148494 CDS
T07439
Name
(RefSeq) histone-lysine N-methyltransferase SETD1B-A isoform X1
Organism
oml
Oryzias melastigma (Indian medaka)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
N-SET
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
112148494
NCBI-ProteinID:
XP_024131428
Ensembl:
ENSOMEG00000013204
LinkDB
All DBs
Position
LG9:24968167..24979098
Genome browser
AA seq
1562 aa
AA seq
DB search
MESSKQNEERDTPPQNWKSCKLMIDPALTKGLYKVYRFDGQFFNIPVEDIGLFPISTLKD
PRVCRLWSKNTKSDLSIAKFKIDEWYIGPVPPREITFSRLNDNVNATFLRQICEKYGSIE
EVEICYHPNTKKHLGLAKVEFDTVKAAKEAVKHLHQTSVMGNIIHVEIDPKGENRSRYLQ
LLLSGLYTPRTLPVGSSEQALRSLVDSLLDSTSAQHQGAFSSPASIQTPLSLDTAYFSIC
QDTPCSFGYTPQSQGTPRTPCLSATPLSQDSCYSSLQATPILQGEPSTYSVCKSLRQELC
LRKPERNRKRSRQVSHFNSKLWQRCLPDSLLEKRKNVQQPGVWSQTAKLSTHEESSSSIA
SPLQGSAGLIDSKDSPQTANSFSILTINVSDEQQTHQPQLESLDSRIESLLTNSEIPSGF
HKNTLEPYENSRDSPASDDLFALSPCGSFLNSPHHSYIVDVSPTSLSESDQEQSLPEETS
QCPSKTTPCERRVYINGGKAEETSQMHLTANQNTKQPNKGQSGATTNTASVAASLCSSSL
SGITPNIPPAPPSLGPPETPFFIPLLPPPSSLPPIPPRLPDGTIPIPPPDWIPHQDVSRL
PPLSIPPPPAFFLPPPPLMLPPPIPPPVHKGPLHAQPVASSGQGSAPFSLIQPPWLAPPF
PRINPFVPPPGYPPAHEHSHKVTAEKVLEVLADELRSIIRKDIVRRMIEGVAFKAFEDWW
EGQEEKLKIQVSPLKKGTCLKENDPLNRITEKGKKPPLPSFRVKRKQLEDIQESSRTSNS
SVKQKDQVGSTSPKAKRRHARPLGLDSSDEDADGEEDKREERAEDDAQMSNPVEAVIPVS
DNLQYLENTLKDSNVDGDSAGDQHSEETETEEETDNTDATFQSADREHCLDKETFPESSS
SEESECCSDCSRSFSSQSFEDFPSDLSTTSEGNKEDECEECIVISSDEDSDETEPPATPS
TPLTPGSQMDLDLQNWLNMCEQTEENHASCQLDFCTLDAMTSLQSSETQNVYHMSPVGLA
AEEPGPDVDMRSPDWMEEFDPVRPLTPTGCLVEADLDILVKNRAATLIVEEVELPPTPGR
GVLADMEIAESDDINEVLSANCELGAAQVDSPSDSCDSDDEMPKTNGEEEGSVRVGAPAT
PGRGVAEDITTDAALHNPSDVLPLSCNPYITPPKTPGRDIVLPLRAHERKTQASPPLHPN
PLRISPIAMSSPCSLAEPLSDTDDWTRPKPLQGLENMPSVLNQEAPSGKQTLWKKTKRKK
REQQKRLGWTHRWRSLYEEWKIFHSFWKRGLDEEDARFLQASYEKLKEENNGAEWLGKWI
SHPTTHSERSKEHQCWLPVHRSGSARSEGFYKISRKEKMKNLSNSKLSTYLPSATAQGAS
VPPQHPSSLRSGSDFRSEQRRLLSSFSCDSDLIRFNQLKYRKKRIRFGRSHIHDWGLFAM
EPIAADEMVIEYVGETIRQVIADRREQRYEEEGIGGSYLFRIDQDTIIDATKCGNLARFI
NHSCNPNCYAKVISVESQKKIVIYSRQPISINEEITYNYKFPIEDTKIPCLCGAENCRGS
LN
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcagtaagcagaatgaagagagagacacgccgcctcagaactggaaaagttgt
aagctgatgattgatcccgcgcttacaaaaggattatacaaggtgtatcgctttgatgga
cagtttttcaacattcccgtggaggatataggattatttcccatcagcaccctcaaagat
ccccgcgtgtgccgcttgtggagcaaaaacacaaagtctgacctttcaattgccaaattt
aagattgatgaatggtacattggacctgttcctcccagagaaataacattctccagactc
aatgacaacgtgaatgcgacgtttttgcgtcagatttgtgaaaaatatgggagcatagaa
gaagtggaaatatgttaccatccaaatactaagaaacatttagggcttgcaaaagtagag
tttgacacggtgaaggcggcaaaagaggccgtgaagcaccttcatcaaacgtctgtgatg
ggaaatattattcacgtggagattgatccgaaaggtgaaaatcggtcaagatatcttcag
cttcttctcagtggcctgtacactcccaggacgttaccagtgggaagcagtgagcaggct
cttcgaagcttagtcgacagcttgctggacagtacatctgctcagcatcagggggcgttc
tccagtcctgccagcatccaaacacccctctctctggacacagcatacttcagtatttgt
caggatacaccttgtagctttgggtacacaccccaatctcagggaaccccccgcactccc
tgcttgtctgccactcctctctcccaggattcctgctactctagtcttcaagcgactccg
atcctccagggggagccgtccacctacagtgtttgcaaatccctgaggcaagagctttgt
cttcgtaagcccgagaggaaccgcaaaaggtccagacaagtttcacattttaactcgaaa
ctttggcagcgatgtcttcccgactccctgttagaaaaacgaaagaacgtccagcagcct
ggagtgtggagtcagactgcaaaattatccacccatgaagagtcttccagttctattgct
tccccattacaagggtccgcaggcttgattgactccaaggattcacctcagacagccaac
tctttcagcatcttgaccattaatgtctcagatgagcagcaaactcaccaaccacaacta
gagagtttggactctcgcattgaaagtttgttgactaatagtgagatcccgtctggcttt
cataaaaacactttagaaccctatgaaaactcccgggacagcccagcttctgatgatctt
tttgccctatccccttgtggatctttcctaaacagcccgcaccattcctacattgtggat
gtcagtccaacatcacttagtgaaagtgatcaggagcaatctttacctgaagaaacctcc
caatgtccatcaaaaacgactccttgtgaaagaagggtttacataaatggtggcaaagct
gaagagacatctcagatgcaccttactgcaaaccaaaatacaaagcagccaaacaaagga
cagtctggagctacaacaaacactgcctctgtagctgcatctctatgcagttcttcctta
agtggcatcactcctaacatcccccctgcacctccttctctaggtcctcctgaaactcct
ttctttattcccctgcttcctcctccatcttctcttccaccgatcccacctcgtcttcca
gacggcacaatccccatcccaccaccagactggatacctcaccaggatgtctcacgtctg
cctcccctctctatcccacccccaccagctttttttctgcctcctccacctttaatgctg
ccacctcccataccgccccccgtacacaaaggccctttacacgcacaacctgtagcctcc
tctggtcagggaagtgcacctttctcgctcattcagccaccttggctcgctccacctttt
cccaggataaatccctttgtgccgccgcccggttatcctcctgcacacgaacactctcat
aaagttacagctgaaaaagttttggaagtcctcgcggacgagctgagatcgatcattagg
aaggacattgtacgccgaatgattgaaggagttgctttcaaggcttttgaggactggtgg
gaaggtcaggaggagaaattaaagattcaagtttctcctttgaaaaagggaacttgcttg
aaagaaaacgatcctctcaatcgcattacggagaagggcaaaaaaccaccattaccatca
tttagggtgaaaaggaaacaactagaggatatacaagagtcttctagaacttctaattcc
agtgtgaaacagaaggatcaagtgggatcaacatctccgaaagccaagcgcagacatgcg
agacctctgggccttgatagcagtgatgaggatgctgatggtgaggaagacaagagagaa
gaaagagctgaagatgacgctcaaatgtccaacccagtagaggctgttattccagtttct
gataatcttcagtatttggaaaacaccttaaaggacagtaatgtagatggtgattccgct
ggagatcaacacagtgaagaaaccgagacagaagaagagacagacaacacagatgctacg
tttcaatcagctgacagagaacactgcctagacaaagaaacgttcccagaaagcagttcc
tcagaggagagtgagtgttgctcagactgctcccgatcgttctcatcacaaagctttgag
gacttcccctctgacttgagcaccaccagtgaaggaaacaaggaggacgagtgtgaagag
tgcattgtgatatcgtcagatgaagactcggatgagaccgagcctccagcgaccccttca
accccattaactccaggctcccagatggatctggacctgcagaactggctaaatatgtgc
gagcaaacagaggagaaccatgcatcctgtcagctggacttctgcactttggatgccatg
acgtcgcttcagtcgagtgaaacacagaatgtataccacatgtcacccgtgggacttgca
gcagaagagcctggacctgatgtggacatgaggagccctgattggatggaagagtttgac
cctgtgaggcctctaactcccactggctgcttagtagaggctgatcttgatattctggtc
aaaaacagagcagcaactctgattgtggaggaagtggagctgcccccgacaccaggcagg
ggggtcctggctgacatggaaattgcagaatcggatgacatcaacgaagtcctgtcagca
aactgtgagcttggagcagctcaagttgattccccatcggattcatgcgattcagatgac
gaaatgcctaaaactaatggggaggaggagggaagtgtaagggtaggagctccagcaaca
cctggcagaggagtggcagaagacataactacagatgcagctcttcataacccatcagat
gttctaccgctgtcatgtaacccatacataacccctccaaaaacacctggaagagacatt
gttttacccctaagagcccacgagaggaaaacacaagcgtcacccccactgcatcctaac
cctctaagaatatctcccattgcaatgtcctctccgtgcagcctcgcagaacctttgtct
gacaccgacgactggaccagaccaaaacctctgcagggacttgaaaacatgcccagtgtt
ctgaaccaggaggcaccttcaggaaaacagacactgtggaagaagacgaaaaggaaaaag
cgggagcagcaaaaacgactcgggtggactcacaggtggcgctcgctttatgaagagtgg
aaaatttttcacagcttttggaagcgtggtctggatgaagaagatgcgaggtttctacag
gcctcttatgaaaagctgaaggaggaaaataacggtgcagagtggctcgggaagtggatt
tctcaccccacgactcattctgagaggagcaaagagcatcagtgttggttgccggttcac
agaagcggttctgctcgcagtgaagggttctacaaaatcagcaggaaggagaagatgaag
aacttgtccaactcaaagctgagcacataccttccctctgcaaccgctcagggagcatct
gttccaccccagcatccctcctcgctgagatcgggctcagactttaggtctgaacagcgc
cgcctgctgtcctctttcagctgcgacagcgacttgatccggttcaaccagctaaaatac
cgaaaaaagagaattcgctttggcaggagccacatccacgactggggcctgtttgctatg
gagcctatagccgcagacgaaatggtgattgagtatgtaggggaaaccatccgacaggtc
atcgctgacaggagggagcagagatatgaggaggagggcatcggaggcagctatttgttt
cgtattgaccaggatactattatagatgccaccaaatgtgggaacttagccagatttatc
aaccacagctgtaatccaaactgttacgcaaaggtcatctctgtggaatctcagaagaag
atagtgatttactcccgacagccaataagcatcaacgaggagattacgtacaactacaag
ttccccatcgaggacacaaaaataccatgtttgtgtggagcggaaaactgcagaggatct
ctgaactaa
DBGET
integrated database retrieval system
