Oryzias melastigma (Indian medaka): 112151394
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Entry
112151394 CDS
T07439
Symbol
pdss1
Name
(RefSeq) decaprenyl-diphosphate synthase subunit 1
KO
K12504
decaprenyl-diphosphate synthase subunit 1 [EC:
2.5.1.91
]
Organism
oml
Oryzias melastigma (Indian medaka)
Pathway
oml00900
Terpenoid backbone biosynthesis
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
112151394 (pdss1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
oml01006
]
112151394 (pdss1)
Enzymes [BR:
oml01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.91 all-trans-decaprenyl-diphosphate synthase
112151394 (pdss1)
Prenyltransferases [BR:
oml01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
112151394 (pdss1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
HEPPP_synt_1
Motif
Other DBs
NCBI-GeneID:
112151394
NCBI-ProteinID:
XP_024136088
Ensembl:
ENSOMEG00000001141
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All DBs
Position
LG20:3096936..3104298
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AA seq
419 aa
AA seq
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MAAPWWRHITRWKRGCWSSAVSETLWPVTGRSASSSGFVPGLVGGSSEPGNEVKPSSQIF
SKSLLSDVSLIRPRPRLPVAALQPLCCRSTHSDAKLKDPFTLAQKDLTTLYDDIKKELFV
SRTELKSLCDYYFDGRGKAIRPIIVVLMARALNVHSNRSGDLLPGQRAIAMITEMIHTAS
LVHDDVIDGSDARRGKQSLNQVWGEKKAILAGDFILSAASMALARIGNITVVKVLSQVIE
DLVRGEFMQLGSKENENERFKHYLEKTFKKTASLIANSCKAVSILVNSDPEVQEIAYQYG
KNVGIAFQLVDDVLDFTSGAEQLGKPSAADLKLGLATGPVLFACQQFPELHAMIMRRFSS
KGDVDRAWQYVLKSDGVQQTTFLARRYCQEAIRQVSLLRPSPERDALIRLTELVLSRDK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggctgccccttggtggaggcacatcaccaggtggaagagaggctgctggagctcagcg
gtgtcagaaacgttatggccggtgaccggcaggtccgcgtcctcctccgggttcgtcccc
ggcttggtcggcggaagctcggagcctgggaacgaggtgaaaccatcatctcagatcttc
tccaaatctctactctcagatgtttctctgatcagaccgcggccccggctgccggtcgct
gctcttcagcctctctgctgccgatcgacgcacagcgacgccaaactgaaagaccctttc
acgttggcgcagaaagacttgacgacgttatacgacgatatcaagaaggagctcttcgtt
tccaggacggagctgaagtctctgtgcgactactacttcgacggccgagggaaggccatc
cggccgatcatcgtggtgctgatggctcgagcgctcaacgtccacagcaaccgatccggg
gatctgcttccgggacaaagagccatcgccatgatcaccgagatgatccacaccgccagc
ctggtgcacgacgacgtcatcgacgggtcggacgcacggcgagggaagcagtcgctcaac
caagtgtggggcgaaaagaaggccatcttagccggagacttcatcctgtccgcggcctcc
atggcgttggctcgcatcggcaacatcacggtggtgaaggtgctctctcaggtcatcgag
gacctggtgcgaggtgagttcatgcagctcggctccaaggagaacgagaacgagcggttc
aagcactacctggagaagaccttcaagaagacggccagcctgatcgcaaacagctgtaaa
gcagtgtccatcctggtgaactctgaccccgaagtccaggagatcgcgtaccagtacggg
aagaacgtcggcatcgcctttcagctcgtggacgacgttctggacttcacgtcgggagcc
gagcagctggggaagccgtcggccgctgatctgaagctgggtttggctaccggaccggtt
ctgtttgcctgtcaacagtttccggagcttcacgcgatgatcatgagacgcttcagctcc
aaaggagacgtggaccgggcctggcagtacgtcctgaagagcgacggcgtccagcaaacc
accttcttggcgcggcgctactgccaggaggccatcagacaggtcagcctgctgcggccg
tccccggagagagacgccctcatccgcctcaccgagctggtgctcagcagagacaagtga
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