Oryzias melastigma (Indian medaka): 112154775
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Entry
112154775 CDS
T07439
Symbol
usp9
Name
(RefSeq) ubiquitin specific peptidase 9 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
oml
Oryzias melastigma (Indian medaka)
Brite
KEGG Orthology (KO) [BR:
oml00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
oml01002
]
112154775 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oml04121
]
112154775 (usp9)
Enzymes [BR:
oml01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
112154775 (usp9)
Peptidases and inhibitors [BR:
oml01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
112154775 (usp9)
Ubiquitin system [BR:
oml04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
112154775 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3517
UCH
UCH_1
DinB_2
FAST_1
Vps23_core
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
112154775
NCBI-ProteinID:
XP_024141696
Ensembl:
ENSOMEG00000014964
LinkDB
All DBs
Position
LG21:6351047..6385952
Genome browser
AA seq
2610 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLPQNQTSSPNSSNENSPVSPPDEQAQVDRPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSETVPAGAQLPDDELFARPPDPRSPKGWLVDLINKFGNLNGFQILH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALNAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKRPIYIQTNL
VGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQLSKEEQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIANRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRAILNRIKANAAHTKIELFIGGEVVDPAD
DRKLIGQLSLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESC
LPGVIMSLHLRYISFLWQIADLGCSLSMPQLRDGARVLMKLMPPDNTTVENLRAVCLDHA
KLGENSLSPSLDSCFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNADGNIPVS
PINQATHDQALVLQSALQSIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVIRA
IQKIVWASGCGTVQLVFSSNEEISRIYEKTNAAKEPDGEDEQVCCEALEVMTLCFALMPT
ALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFTVL
GSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRTGETG
VEETILEGHLGVTKELLAFQTPEKKYYIGSEKGGANLIKELIDDFIFPASNVYLQYMKTG
EFPTEQAIPVCSTPASINAGFELLVALAVGCMRNLKQIVDTLTDMYYSGGETLTEWEYLP
PVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEKQE
NESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYVPRGF
WKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKICQGC
PHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRLLIK
KLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPENQVI
QQNEPSESTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDGDVTE
CKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDSELVK
YISDLTISSTKPHQVKMPTVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSVYLNP
PPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSKNVRY
WFAHNVLFAYPNRFSEYLLECPSAEVRGAFSKLIVFIAHFSLQDGPCPSPTASPGPSAQG
CDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKSQLLKLNVPATFM
LVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCEVSSRMQSSINGNPPLPNPYGDPNLTA
PVMSVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFCCWENPQFSSTVLSELLWQVA
YSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQKRAYQ
CIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNWSPPV
QSNETSNGYFLERSHSARMTLAKACELCPEELKCTQESPGKEPDEQEAPDDQDSSPPEET
SLYPHSPGSTQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPAQTPASGPSTTPG
SGPRPQEHWEGTEEVAPVPASTPAPAPPKE
NT seq
7833 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacgcgtggctctccagtggggggcaatgatagtcagggccaaggccag
gcacctgatgctcaaagccagcccccactgccacagaaccagacatcgtctcctaactca
tctaatgagaactccccagtgagcccaccagatgagcaggctcaggtggataggccccct
cagctggaggaggaagagcctgctttccctcacactgacctagccaagctcgatgacatg
atcaacaggcctcgttgggttgttccagttttgccaaaaggagaattagaagttctcttg
gaagctgctatagacctgagtaaaaaagggctggacgtgaagtgtgaggcctgtcagcgg
tttttcagggatggtctgaccatttccttcacgaagatcctgacagacgaggcagtcagt
ggctggaagtttgagatccatagatgtatcattaataacacacaccgtttggtggagctg
tgtgtggcaaagctctctcaggactggttccctttattggagctgttagccatggccacc
aacccccactgcaagttccacatatacaatggcacacggccctcggagaccgtccctgct
ggagcacagctgcctgatgatgagctctttgcccgaccaccagacccacgatctcctaag
ggttggttggtggacttaataaacaaatttggcaatttaaacgggtttcaaatattgcac
gatcgcttcatgagtggccaagcactgaacgtccagatcatcgctgcacttatcaaacct
tttggccagtgttacgagttcctcacattgcacacagtaaagaagtacttccttccagtc
atcgagatggttccccagtttctagagaatctcacggatgaggagctaaaaaaagaggcc
aagaacgaagccaaaaacgacgcactgtccatgataatcaagtctctaaagaatctggcc
tctcgtgtaccagggcaggaggagaccgtgaagaatttagagatttttagattaaaaatg
attcttaggttattgcaaatttcttcttttaatggcaaaatgaatgcactaaatgaagtt
aacaaagtgatctccagcgtgtcctactacactcatcgtcataaccccgaggaagaggaa
tggctgactgctgagcggatggcggaatggatccagcaaaaccacatactgtctatcgtg
ctaagagacagtttgcaccagccgcagtatgtcgaaaaactggagaagattcttcgcttt
gttattaaggagaaagctcttaccatgcaggacttggacaacatctgggcagcacaggct
ggtaagcatgaggccattgtaaagaatgtccacgaccttctggctaagctagcatgggac
ttctcgcctgagcagctcgatcatctttttgactgttttaaggcgagctggaccaacgcc
agcaagaagcagcgtgaaaagctgctggaacttatccggcgcttagcagaggacgacaaa
gacggggtgatggcccacaaggtcctcaacctactgtggaacctggcgcacagcgatgac
gttcctgtagacattatggaccaggcgctcaacgctcacatcaaaatattagactacagc
tgctcacaggacagagacacgcagaagattcagtggatagatcgctttatagaggagctg
cgaaccaatgacaaatgggtgatccctgccttgaagcaaatcagagaaatctgcagcctc
ttcggtgaagctcctcaaaatcttagaaagaaaaggccaatttacattcaaacgaactta
gtcggtcaaacccagagaagtccacacgtgttttaccggcacgacctgatcaaccagctg
cagcataaccacgctctggtcaccctcgtggccgagaacctctcggcttacatggagact
atgaggcagttatccaaagaagaacaagcggagtttgatcctcagacggtcagaccagga
agtcgctacagtcatgtccaagaagtacaggaacgactcaacttcttgaggtttctacta
aaagatggccagctgtggctgtgtgcccctcaagccaagcagatctggaagtgtctggca
gagaatgctgtgtttctctgcgaccgcgaggcctgcttcaaatggtactccaaacttatg
ggtgacgaaccagacctggatccagacatcaataaggacttctttgagaataacgttcta
cagttggatccatctctgctgacggaaaatggcatgaagtgctttgagaggttcttcaag
gctgtcaactgcagggaggggaagctggtagcaaagcgcagggcttacatgatggatgat
ttggaactaataggcctggactatctatggagggtggtaattcaaggaagtgatgacatt
gctaaccgagccatagacctgctgaaagagatttacaccaaccttggtcccaaactacaa
gtcaatcaggttgagattcacgaggatttcatccagtcctgcttcgaccgtctgaaggca
tcttatgacaccctttgtgttttggacggagacaaagacagcattaactgtgccaggcag
gaagccatccgcatggtacgcgttttgactgtcctgaaggagtacatcaatgagtgtgac
agcgactaccacgaggagaggactatactgcccatgtccagagctttcagaggaaagcac
ataacgctgatcgtacgtttcccaaaccaaggtcgccaagtagacgatttagatatctgg
tcgcacaccaacgacacgattggctcggtgaggcgtgccattctaaacagaataaaggct
aatgctgcacatacaaagatcgagttgtttatcggcggtgaggtcgtggatccagctgat
gacaggaagttgatcgggcagctcagtttgaaggacaaaacgttgatcacagccaagctg
acccaggtgagtgccaacatgccctcaagtccagatagctcatccgactcgtctactggc
tctcctggtaaccatggaaaccactacagtgacgggcccaaccctgaggtggaaagctgt
ctgcccggtgtgattatgtcgctgcatctgcgatacatctccttcctgtggcagatcgct
gatctgggttgtagcctcagcatgcctcaactaagagatggagctcgtgttctcatgaag
ctcatgcctcctgataacaccacagtagagaatttgagagctgtgtgtttggaccatgcc
aagctgggagagaacagcctgagtccttcgttggactcctgcttctttggcccctccccc
tcacaagtgctctacctcatagaggttgtgtatgctttgctgatgccagccagtgccact
cttggtgaagatgctagtgacttccaatataacttcctaaagagcggcggtctgcccttg
gtgctcagcatgctcaccagaaacaacttcctcccatcagcagacatggaaacccggaga
ggagcgtacctcaatgcactaaagattgcaaagctcctgctgaccgccgtcggttttgga
catgtgaaggcggtggctgaggcctgccagcccaacgccgatggaaatattcccgtctct
ccgatcaatcaggccacgcatgaccaagcgctggttcttcagagtgccctgcaaagcatc
cctaacccggcctcagagtgtatgttgcgtaatgtagccattcgcctggcccagcagatc
tctgatgagaattttttccaggcgtcaaagtacatcccagacatttgtgtaatccgagca
atacagaaaattgtgtgggcatcaggctgtggtacagtgcagctcgtctttagctccaat
gaggaaatcagcaggatatatgagaagacaaatgctgccaaggaaccagatggggaggac
gagcaggtgtgctgcgaggccttggaagtcatgaccctgtgctttgccctcatgcccacg
gctctcgacacactgagcaaagagaaggcttggcagacttttatcatagacctcttgcta
cactgccacagcaagtccgtgcgacaaatggctcaggagcagtttttcctcatggccacg
agatgctgcatgggccaccgacccctcctcttcttcatcaccctcctattcactgtgttg
gggagcacagccaaagagagagccaaacatgcaggggactacttcaccttgctcagacat
ctgctaaactatgcctataacagcaacatcaacctgccaaacgccgaggtgctgcttaac
aatgagatcgactggctcaagagaatacgggatgaggtgaagaggacgggagagactggc
gtggaggagacgatcctggagggtcaccttggagtcaccaaagagctccttgctttccaa
acaccagagaagaagtactacattggcagcgagaagggaggagccaaccttataaaggag
ctgattgatgacttcatattcccagcatcaaatgtttacctgcagtacatgaagactgga
gagttccccacggagcaggccatcccggtgtgcagcactcctgcctccatcaatgctggc
tttgagctcctggtggcgctggccgttggctgcatgcgtaacctgaaacaaatcgttgac
accctgactgacatgtactactcaggtggcgagacgctgaccgagtgggagtacttgcct
ccagttgggccccggcccaataaaggttttgtaggtctaaagaacgccggtgccacttgt
tacatgaactctgtcattcagcagctgtacatgatccctcccattcgcaacggcattctg
gctattgagggaacgggcacggatgtggacgatgacatgtcgggggacgagaagcaggag
aacgagagtaacgtagatcctcgtgatgaggtcttcagctaccatcaccagtttgatgac
aaaccctccagtaagtcagaggacaggaaggagtacaacatcggagtgcttcgtcacttg
caggtcatcttcggtcatctcgctgcttccaggctgcagtactacgtcccaagagggttc
tggaaacagttcagattgtggggtgagccagtcaatctgagggaacagcacgatgctctg
gagtttttcaactctttggtggacagtttggatgaagctctgaaagctctgggtcacccc
gccatgctcagcaaggtgctggggggctctttcgctgaccagaaaatctgtcaagggtgc
cctcacaggtatgagtgtgaggaatcgtttacaacacttaatgtggacatcagaaaccac
caaaacctgttggactccatggagcagtatgtcaaaggagatctgctggaaggagcaaat
gcctaccactgtgagaagtgtaataaaaaggtggatactgtaaagcgcctgttgatcaag
aagcttccacctgtcctcgccatccagttgaagcgctttgactacgactgggagcgggaa
tgtgccatcaagttcaatgactactttgagttccccagggagctggatatggagccctac
acagtagcgggtgtggcgaaactagagggggacgacgtgaacccggagaaccaggttata
cagcagaacgagccgtctgagtccacaccgccgggcagctccaaataccgtctggtggga
gtgctggtccactcaggccaggccagcggcggacactactattcctatataatccagagg
aacgggggggacggggagaagaaccgctggtataaatttgatgacggggacgtcacggaa
tgcaagatggacgacgaggaggagatgaagaaccagtgcttcggtggggagtatatgggc
gaagtgtttgaccatatgatgaaaaggatgtcgtatcggaggcaaaagcgctggtggaac
gcgtacatcctgttttacgagcgaatggactcgttggacaaggacagcgagcttgtgaaa
tacatctcggacctgaccatctcttccaccaagccgcatcaggtcaagatgcccacggtc
atagagtgcagcgtccgcaagcagaacgtccagttcatgcacaaccgaatgcaatacagc
ctggaatatttccagttcataaagaaacttctgacctgtaacagtgtctatttaaaccct
cctccagggcaggaccatctgctgccagaggcagaggagattgctatgatcagcgctcag
ctggctgctaggttcctcttcagcacaggttttcacaccaagaaagtagtacggggtcct
gccagtgactggtatgacgccctctgcatcctgctgagacacagtaagaatgtacgttac
tggtttgcacacaacgtcctgtttgcgtaccctaaccgcttctccgagtatttgctcgag
tgccccagcgctgaggtccgcggagccttttccaagctcatcgtcttcatcgctcacttc
tccctgcaagatggcccctgcccctcccccaccgcctcacctggaccgtctgctcagggc
tgtgataatctcagtttaagtgaccacttgttgagagccgttctaaacctgcttagaaga
gaggtttctgaacatggccgacatctacagcagtacttcaacctctttgtcatgtatgcc
aatctggggctggcagagaagtctcagctgctgaagctcaatgttcctgccactttcatg
ttggtcgctctagacgagggtcctggtcctcccattaaataccagtatgcagaactgggc
aagctctacactgtggtctcccaactggtccgctgctgtgaggtctcttcacgcatgcag
tcctccatcaacggtaaccctccccttccaaacccgtacggggatcccaacctgacagct
ccggtgatgtctgtgcaacagctagtggcagagatcctgtttgtgaggacgagctacgta
aagaagatcatcgaagactgtagcaactcggaggagaccgtgaagctccttagattctgc
tgctgggagaaccctcagttctcctctactgtgctcagtgaactcctttggcaggtggca
tattcttacacgtatgagctgaggccttacctggacttgctgctacagatcctcctcatt
gaagactcctggcagacgcacaggatccacaatgtactgaagggcatccctgatgacaga
gacgggctgtttgacaccatccagcgctccaaaaaccactaccagaagagggcctaccag
tgcatcaagtgcatggtggccctctttagcaactgttctgtggcttaccagatcctacag
agtaatggtgacctgaaaagaaagtggacatgggcggtggaatggttgggggatgagttg
gagagaaggccgtacacggggaacccccagtacacctacaacaactggtcccccccagtt
cagagcaacgaaacctccaacgggtatttcctggagcgttcacatagtgcacgtatgaca
cttgccaaagcctgtgaactctgtcctgaagagctcaagtgtacacaggaaagcccaggg
aaggagccggatgagcaggaagcacctgatgatcaagactcctcccctcctgaagaaacc
tctctgtacccacattctcctggaagcacccagtttcagcagaacaaccacccccatggg
cagccttacactgggcctgctgctcagcacatgaacaacccccagcgccccggcccagcc
tctgctccgactcccggcccggcccagacccccgcctcaggccccagcaccacccctggt
tcaggcccgcgaccacaagagcactgggagggcaccgaggaagtggcccccgtccccgcc
tccaccccagcacctgcccccccgaaggagtaa
DBGET
integrated database retrieval system
