Oncorhynchus mykiss (rainbow trout): 110507120
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Entry
110507120 CDS
T07259
Symbol
tyw1
Name
(RefSeq) LOW QUALITY PROTEIN: S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omy03016
]
110507120 (tyw1)
Enzymes [BR:
omy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
110507120 (tyw1)
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
110507120 (tyw1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Flavodoxin_1
Radical_SAM
Motif
Other DBs
NCBI-GeneID:
110507120
NCBI-ProteinID:
XP_036820533
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Position
27:20083569..20156245
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AA seq
526 aa
AA seq
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MVSESVAERTGYLKGEMRMDGYSVEKVVDVSKAQIFYGSQTGTAKHLSLQCSNKLVCMFL
LAVYTDGHPTENAEWFCKCLEEASTDFRYGNAYLKGLRYAVFGLGNSVYGCHYNTVSKNV
DKWLWMLSGIRVLSRGDGNCNVANSHNGSVHADFLVWKTKFLSCLQALVAGQKKACSGNC
NMGSSCKTRNRKKPQSSVFSYQEELVESSSDEETTGSEENSPGSVIDVEDLGNILNGIKK
AKAPWGHQGYKVIGSHSGGKRCRWTKSMLRGRGGCYKPSFYGVESHRCMESTLSLVCANK
CDFCXRHHTNPVGTEWRWKMDXAEKILLEAVENHQNMFRQQGGGNKCTSQAEEVCAVIRL
SSFMVPKAQFPQEIRNLVPVTKLYVSVGAGTKGSLKKIDQLLFNDFWPRFLDSLKALAVS
RQRTVYKLTLVKTWTVDKLKAYSEXSLGQPDFIEVKLKVEGEWWTWIDYERFQELVQAYX
GSQTFSAQDHMAKTPTQALFGAQEXGFDPTDTRYQRRHKTKDISGC
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtgagagtgtcgcggagagaactgggtatctgaaaggtgagatgaggatggat
ggttacagtgttgagaaagtggttgatgtatctaaagcacagatattctatggatcacag
actggaactgcaaagcatctctctctccagtgctccaacaagttggtctgtatgttccta
ttggctgtgtacactgacggacatcccacagaaaatgctgaatggttctgtaagtgtctg
gaggaggcatccactgacttcagatatgggaacgcctacctgaaaggactgagatatgca
gtgtttggcctgggcaactctgtgtatggctgccattacaatacggtgagtaagaatgtg
gacaagtggctgtggatgctgagcggcatccgggttctgtccagaggagatggcaactgc
aacgtagcgaatagccacaatggcagcgtgcatgctgactttctggtctggaagaccaag
ttcctgagctgcctgcaggccctggttgcagggcagaagaaggcctgtagtggaaactgt
aatatgggcagctcatgtaagaccaggaacaggaagaaaccacagtcctcagtcttctcc
tatcaggaggagctggtagagtccagtagtgacgaggagacaactgggtcagaggagaat
agcccaggctcagtcatcgatgtggaggatctaggaaacatcttgaacggcatcaagaaa
gccaaggctccatggggacaccagggatacaaagtcataggaagtcactcaggaggcaag
cgttgtcgttggaccaagtccatgctaagaggaagaggaggttgttacaagccctccttt
tatggcgtcgagtcccacaggtgtatggagtccacccttagcctcgtctgtgccaacaag
tgtgacttctgctagagacaccacactaacccggtgggcacagagtggcgctggaagatg
gacnctgctgagaagatactactggaggctgtggagaaccaccagaacatgttccgacag
caagggggagggaacaagtgtacatcacaggcagaggaggtttgtgcagtcattaggctc
tccagcttcatggtccccaaggcacagttcccccaggagatcagaaatctagtaccggta
accaagctgtatgtgagtgtgggtgccggcaccaagggcagtctgaaaaagatcgaccag
ctgctcttcaacgacttctggccgaggttcctagacagcctcaaggctctggcagtctct
cgacagaggacagtgtacaaactgactctggtgaagacgtggactgtagacaaactgaag
gcctactcagagnnctcgctgggacaacctgatttcattgaggtcaagttaaaggtggag
ggagagtggtggacgtggatagactacgagcggttccaggagcttgtccaggcctatnga
ggcagccagaccttctctgcccaggaccacatggccaagaccccaacccaggccctgttt
ggtgcccaggagtgaggtttcgacccaacagacacacgctaccagaggagacacaagacc
aaagatatctcaggatgctga
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