Oncorhynchus mykiss (rainbow trout): 110524736
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Entry
110524736 CDS
T07259
Symbol
efcab7
Name
(RefSeq) EF-hand calcium-binding domain-containing protein 7
KO
K23852
EF-hand calcium-binding domain-containing protein 7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
110524736 (efcab7)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110524736 (efcab7)
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
EVC complex
110524736 (efcab7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_4
SPARC_Ca_bdg
EF_assoc_2
EFhand_Ca_insen
SAD_SRA
Motif
Other DBs
NCBI-GeneID:
110524736
NCBI-ProteinID:
XP_021460295
Ensembl:
ENSOMYG00000010513
LinkDB
All DBs
Position
5:complement(87071831..87093894)
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AA seq
617 aa
AA seq
DB search
MSLQASSQSIGMQKCTDEETFYMHCRAAYLTVFRSSLASISSKHQLCRVLQQAGRNPSQA
TLNKHWTPSTTKLNFDDFCEIVKNERPTEVHELMRAFRKMDINGDGYISHNELHIVLTSR
GEKMAAKEVDAIFSLADTNKDGKLDYAEFCRLLESTAEQCQIAALERLEADAKLKRQNFG
NELDSPPKSLASTAVTVPQPPHKTEPDITLKKDSRSSSRPSSARSRRSSLSNAITMAASN
TKSVKLAEPTSIQDWHHTCMKGSFFLEEDGGITSLQYRLTVPQTATVYLTIRPLNLSQRL
EKPSSWMSVDTAVFVVSGKDTKEDSTLVCFTESRDKEKCCWKGELSAGTYCLLPFTTSCR
LRKRTRKSVSKPVTLVNRTDTGELDLTRDFRGALSDIFEVIDLDGNGLLSLEEYNFFELR
TSGENCDEEAWAVCKENFDTRKNQLSRQGFMELNLMEASERGGDPTDLWVTLEAMGYNRN
LEMVEACPFLIDVYCEEGQCTLQPVSLESGHRILNTALQRSITARSEVKTLRGQENVLVY
TYRGEHRISTVIANKTNQKVTVHVNNEQSKNCSSSRGMSVFAVEVPARTKMVCQHVLPIN
EHQEWTYNCVESIIPCQ
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacaggcatcttctcagtctatcgggatgcagaaatgtactgatgaggaaacg
ttctacatgcactgcagagctgcctacctgactgtatttaggtctagtctggccagtatc
agctccaaacatcagctatgccgtgttctccagcaggcaggcagaaatccatcccaggca
actctcaacaaacactggaccccaagtaccactaagctgaactttgatgatttctgtgag
atagtgaagaatgagaggccgacagaggtgcacgagttgatgagagccttcagaaagatg
gacattaatggagatggctacatctcacacaatgaactacacatagtcctcacttcaaga
ggtgaaaagatggctgccaaggaggtggatgccattttttcattagctgataccaacaaa
gatggcaaattggactatgccgagttctgcagactgttggagtccacggcagagcagtgt
cagattgcagctctggagagactggaggctgatgccaagctgaagaggcagaactttggc
aacgagttagacagccctccaaagagcttagcgtccaccgctgtgactgtcccccagcca
cctcacaaaaccgagccggacatcacactgaagaaagacagcagatcgtcgtcccggccc
tcctcagctcgcagtagacggtcgtcactgtctaacgccatcaccatggcagccagcaac
actaagagcgtcaagctggcagagcccacatctatacaggactggcatcacacctgtatg
aagggcagtttcttccttgaggaggatggaggcatcacgtccctgcaataccgtctcacc
gtcccccagacagccaccgtctacctcaccatcagacctctcaaccttagccagagactt
gaaaagccctcatcctggatgtcggtggacacagctgtctttgtggtgtcaggaaaagac
actaaagaggactccactttggtgtgtttcactgagtcaagagacaaagagaagtgttgc
tggaagggggagctgagtgctggtacctactgcctccttcccttcaccacgagctgtagg
ctgaggaagaggaccaggaagagtgtgtctaaacctgtcacgctggtcaacaggactgac
acgggggagctggacctcactagggacttcaggggggcgctgtctgatatctttgaggtg
atagacctggatgggaacggcctcctcagtctggaggagtacaacttctttgagctcagg
accagtggagagaactgtgatgaggaagcatgggctgtctgcaaagagaactttgacacc
cggaagaaccagctcagtcgtcagggcttcatggagctcaacctgatggaggccagcgag
agggggggagaccccacagacctctgggtaacgctggaggccatgggctacaaccgcaat
ctggagatggtggaggcatgtccgttcctgatagatgtttactgtgaggagggtcagtgt
actctgcagccggtcagtctggagtcaggccacaggatcctgaacacagccctgcagagg
tccatcacggccaggtcagaggtcaaaaccctcaggggtcaggagaacgtcctggtctac
acctacagaggagaacacaggatctccaccgtcatcgccaacaagaccaaccagaaggtg
acggtgcacgtgaacaacgagcagagtaagaactgcagcagcagcagagggatgagtgtg
ttcgctgtggaggtccctgctagaaccaagatggtgtgccagcatgtcctgcccatcaac
gagcaccaggagtggacttacaactgtgtggagagcattataccatgccagtga
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