Oncorhynchus mykiss (rainbow trout): 110532472 Help Entry 110532472         CDS       T07259                                  Symbol cdh23 Name (RefSeq) cadherin-23   KO K06813   cadherin 23 Organism omy  Oncorhynchus mykiss (rainbow trout) Brite KEGG Orthology (KO) [BR:omy00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:omy03037]     110532472 (cdh23)    04515 Cell adhesion molecules [BR:omy04515]     110532472 (cdh23) Cilium and associated proteins [BR:omy03037]  Primary cilia and associated proteins   USH complex and associated proteins    110532472 (cdh23) Cell adhesion molecules [BR:omy04515]  Cadherins   Major cadherins    110532472 (cdh23) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Cadherin_2 Motif Other DBs NCBI-GeneID:  110532472 NCBI-ProteinID:  XP_036836619 Ensembl:  ENSOMYG00000000280 LinkDB All DBs Position 1:complement(56904609..57560424) Genome browser AA seq 3329 aa AA seqDB search MLWSVGFGGRMTVAKLLLFFFILHTFCEASNQPPRFQNYFFHSYLLIYENTPVGTSVTQL EALDPEQEPLIFGVVGEEAMRYFAVARDTGVVWLRQPLDRETKSEMQVEFSVSDSQGVVK DTVNIQIGDVNDNSPTFHGQLYTVHIAENTPVGTSVYQVNATDPDQGTGGSVLFSFQPPS PFFSIDGARGTVTVTRALDYETTSAYQLTVNATDQDKKRPLSSLSNLAITITDVQDMDPI FTNLPYSTNIEEDAPLGYEVRKIKAIDQDLGRPRGIGYTIISGNTNSIFALDYISGSLTV NGQLDRENPLYSPGFTFTVKGTELNDDRTPSDASVMTTFTILLIDKNDNAPKFNSSEYRV HITELAQVGFALPLFIQAEDKDEGVNSMFQVFLTGNNSDHFTISPTAVQGRADIRMRVAV PLDYENIRAYSFSLFANESMSDHVGFARIYIDLINENDNRPIFSKPLYNISLPENTPRGT SLLRIQAIDGDFGTFGAVRYYFSDEPDQFLLDAETGWVSLRGNLDYELMRRFTLTVLARD GGGEETTGRLRVNVLDVNDNTPLFQKEVYMGSLRENEQTTQQVARVRATDEDSPPNNFLT YTITSASVFRSYFRIIMVEGYAVIIVNSPLDYEMVPEGLIYLTVMAKDGGNPALNSSVSV TVELFDENDNPPKFSKPSYIAKIPEDIIAGATVVFVNATDLDASREFGQASLIYSLQGSS QFRLNTRSGEITTTALLDRELKSEYILIVRAVDGGVGPLQKTGIATVNITVLDINDNAPM WRDEPYHANVVEMSPMDTDVISVLAIDPDDGDNGTVVYSISPENPFYTINSSTGKIRTSG VVLDRESSNPKDTLLMRTIIVSAVDIGRPPLRSSFSTTVYVNLLDLNDNDPTFLNLPFVA EVPEGLPSGSSVFKIQVDDPDEEENGMVTMALQVGMPRLDFYLNSTTGVLYSTATLDREQ IGLYHLRIVGYDQGQNPRTSTSTLTITVLDVNDETPTFFPKVYNVSLQESVPRDDVVAHL NCFDNDSGLNAELSYFITGGNQDGKFSVGFRNGVVRTVVALDRETQAAYTLVIEAIDNGP SGSRRTGTATVFVKVLDVNDNRPIFLQNSYETSILENVPIGTSILQVQATDADQGENGRV LYKILSGNSKSLFSINELSGLVTRGQRALDRESSSSHVLEVEAYNRDQGRMRSSVRVIVY VEDANDEPPVFTQQQYNRLGLRETAGIGTSVIVVRATDPDTGDGGAVAYALVSGSDHKFD VDVSTGLVTTVDYLDYETKTSYLMNVSATNQAPPFHRGFCTVYVTLLNELDEAVAFFSAG YEVSLLENIATGTEVVQVQAQSADNLNQLSYRFDPDTSPAALTLFKIDSITGRITVTGLL DREKGDIYTLTVVADDGGPKKDSTVKVSITILDENDNSPEFDITSDSSVEIPENTPIGKR VAVVLGRDKDAGNNALVNFSLVAGNMQDVFEIRTVNHTNGEIYVNSPLDRESVDRYLLKV RAMDSGVPPHYSDLSLIVNILDVNDNTPIIESQGGYNVSISENVGGGTSVLRVVATDHDI GTNAMLFYYITSGNQDLTFRMDRMTGEMTTRPCPPDRERQQEYRLTVMVEDDGTPPLSSS TTIYVHIVDENDNAPEFPEEEYVTVLSEGPDTLGATIATVTAIDPDEGLNGTLRYTIDHG NLAITFCINQITGKIVAVKELDFEISNGHYALVVTATDQCPIHALRLTSSTTVLVNVLDV NDVTPTFPKVYEGPFKITEGQPGPRVWTLKATDQDSGLNGKVEYSITAGDPQNEFVISPV EGELRVRRDVELDRETTPFYNITVMAKDLGKPPRSSMVVVGVHVLDINDNDPVLLNLPHN TSVSEGASVYTSVARVRAQDVDSGRNALLTYNITAGNRYGAFYINDTTGVVQVNRPLDRE RVAEYRLAITVKDNPENSRIARRDSELLVITVLDENDNRPIFTQTSYRAEITENSPTGSA VSMLNGPVLAEDKDIGPNAVVRYHLLGTRQDLFTVDSDTGVVRVRQAALLDREMFVEPRV ELFLVGEDVWGLNSSVPLTVTILDQNDNPPVFNPPSLTVHLPENSPTGVVVTQLSASDAD SGSNAWLLYRLESGAQDRFIVDSLSGAILVGNAILDREERGSYRLVILATDRGTPSLSGT ATLSVILDDVNDSRPRFIEPVTTINVNESTPPGVVVATLAAEDHDLRPRLEYYIISVEAK DDGNNPVDGLQESFGIDFHTGAVFVHNPLNRELVATFEILVSVHDNASDVIDMSVSVPNA RLTVNVLDVNDNAPRFRPFGVANFSEKILEGAQPGTTLLSVSAVDPDKGPNGQVIYQLLH LPRGDYLRLEDPSTGKIVANRTVDFEQVQWLNFTVRAQDHGSPPRVAELPVYLRIVDIND NKPIFTQPSYQKPVFEDVDLGTVIVTVSATDADSGLFSVIEYGLVDGEGKFGITPSTGDI YILSPLDRETKDHYTLTAIARDNPGGSPNNRREKSVQVLVTVLDVNDFRPRFSDQVFETS VFENEPSGTSVITLTANDLDEGENGLLYYSLQGPGADAFSLDADTGLVRSLRLLQSFECF NLTVVATDQGKPPLWGTATLHIIIIDVNDNRPMFVRPTNGTIMHIMEEQAPGLLVYEVFA TDGDEGVNGEVRYAFLQTGARNRDWENFHIDTITGVITTAVKLDREKQALHSLIVVAYDL GQPVPYETTQPLQVALLDIDDNEPVFFKPPRGSLPYQTLSVAEHSTPGTVVGNVKGAVDA DEGSNAVVYYFIAGGDTEGNFGLNPGGILKVKKDLDREDISVYSIIVKASSHRNWVPPRD QRSARGRSLDPSQDPTLQEIRICLEDINDQPPRFTKLEYTAGVAADAKVGSDLIRVQAID NDIGNNSLVLYHVLSIRYIKLQSNDSEDIGNVFIIGETDGIIRTFDLFTAYDPGYFMVEV LARDLAGHSDITMVDIYILRDNQRVKIIINEIPERVQQFQEEFISLLSNITRAIVNTDDM QFHVDKKGRVNFAQTDVLIHVVNKQTNRILDVEKVIQMIDENKDQLRNLFRNYNILDVQP AISRRAPDDLTTLQMAIIILAVLLFLAAMLFIFTNWYYRTVHKRKLKAIVAGSTGNQGLM DILDMPNTNIYSFEGANPVWLDPFCRNLELAAQADNEEDLPVNLSEITDLWNSPARTHGT FGREPQAKPEDDRYLRAAIQEYDNVAKLGQIMREGPIKLIQSDLDDDEDDRVGMGDSWGT LRFRHKLPVEMRGPDGVHSSTGTLLTSDLNSLPEDDQRALAGSTEALNIIDGGLYAERNT RTESAKSTPLHRNKDTDMLTESPLEITEL NT seq 9990 nt NT seq  +upstreamnt  +downstreamnt atgttgtggagtgtgggttttggtggcaggatgactgtggccaagctcctcctattcttc ttcatcctccacacgttttgcgaagcctccaaccagcctccacgcttccagaactacttt ttccactcataccttctcatctatgagaacacaccagttggcacatcagtgacccagcta gaggctctggacccagaacaggagccactcatctttggtgtcgtgggagaggaggccatg aggtactttgccgtggcgagagacacaggagtggtgtggctacgacagcccctggaccgc gagaccaagtcggagatgcaggtggagttctctgtgagtgacagccaaggggtggtcaaa gacacagtaaatatccagataggagacgtgaatgacaactccccaactttccatggccag ctgtacacagtacacatcgcagagaacactccagtgggcacctcagtgtaccaggtaaat gccacagacccagaccaaggcacagggggaagtgtgctcttctccttccagcccccttct ccctttttctccatcgatggagcccgtggtacggtcactgtcaccagggccctggactac gagaccacctcggcctaccagctcactgtcaatgccacggaccaggataagaagcggcct ctatccagtctgtctaacttggcaatcaccatcactgatgtccaggacatggaccccatc ttcaccaacctgccctacagcactaacatagaggaggacgccccactgggctatgaggtg cgcaagataaaagccattgaccaggatctggggagaccgaggggcattggctacaccatc atctcaggcaataccaacagtatctttgctctggactacatcagtggctctctgacggta aatggacagctggacagagagaaccccctctactcacccggattcactttcaccgtcaag ggcacagagttgaacgatgaccgtacaccgtcagatgcctcggtgatgaccaccttcacc atcctgctgattgacaagaatgacaacgcgcccaagttcaacagctctgagtaccgtgtg cacatcaccgagctggcccaggtgggcttcgccctgcctctcttcatacaggctgaagac aaggatgagggagtgaatagtatgtttcaggtgttcctaacggggaacaactcggatcac ttcaccatctcccccacggcggtgcagggccgggctgacatcaggatgagggtggccgtg cctctggactatgagaatattcgcgcctacagcttctctctatttgccaatgagtccatg tcagaccatgtgggttttgctcgtatctacattgacctgatcaatgagaatgacaaccgg cccatcttcagtaaacctctgtacaacatcagtctgcctgagaacactcccagaggcacc tccctgctacgcatccaggccatagacggtgactttggcacatttggggccgtgcggtac tacttcagtgacgagcctgaccagtttttgttggacgctgagacgggatgggtgagcctg aggggaaatctggactacgagctgatgcgtcggttcaccctgaccgtgctggcccgggat gggggtggagaagagaccacgggcaggctgagggtcaatgtgctggatgtcaacgacaac acaccactctttcagaaggaggtctacatgggttcgctgagagagaatgaacagaccaca cagcaggtggcccgagtcagggctacagatgaagactctccccctaacaacttcctgacc tacaccatcacatcagcatctgtattccgtagttacttcagaattatcatggtggagggc tacgcagtgatcattgtgaacagcccactggactacgagatggtccctgaaggactgatc tacctgactgtgatggccaaagacggggggaacccagccctcaacagcagtgtctctgtc accgtggagctgtttgatgaaaatgacaacccaccaaagttcagcaagccatcctacatt gccaagatccctgaggacatcattgcaggggcgacagttgtgtttgtgaatgccactgat ctggatgcatcccgagagtttgggcaggcctccctcatttactccctacagggctcctcc cagttccgcctcaacactcgctcaggagagatcaccactacagccttactggacagagag ctgaagtcggagtatatccttattgtcagagcagtggatggaggggtggggccactgcaa aaaactggcattgccacggtgaacatcaccgtcctggacatcaacgacaatgcccctatg tggcgagatgagccctaccatgccaacgtggtggagatgagccccatggacactgatgta atctctgtgctagcgatagacccagacgatggggacaatgggacagtggtgtacagcatc agcccagagaaccccttctacaccatcaatagcagcacagggaagatcaggaccagcggg gttgtgctggacagagagagctccaaccccaaagacacactgctcatgaggaccatcatc gtgtctgctgttgacattggcagacctccgctgcgttcctcattcagcaccacggtgtac gtcaacctgctggacctgaatgacaacgaccccaccttccttaacctgccctttgtggcc gaggtgccagaaggcctgcctagtggatcctctgtgttcaagatccaggtggatgaccct gatgaggaggagaatggtatggttaccatggcgctgcaggtgggcatgccacgccttgac ttctatctcaacagcaccacgggcgtgctgtactccacagcaacgctggaccgtgagcag attggcctgtaccacctgaggattgtgggatacgaccaagggcagaacccgcgcacctcc accagcaccctcaccatcacagtcctagatgtcaacgacgagacccccacgttcttcccc aaagtgtacaatgtgtccctgcaggagagcgtccccagggacgatgtggtggctcacctc aactgcttcgacaacgactccggcctcaacgctgaactcagctacttcatcacaggtggt aaccaggatggtaaattcagtgttggcttcagaaatggtgtggtccggactgtggttgcc ctggacagagagacacaggctgcatacacactggtcatagaggctatcgacaatggtcca tcaggcagcaggaggacaggcacagccacagtgtttgtaaaagtactggatgtgaacgac aacagacccatcttcctccagaacagctacgagaccagcatactagagaatgtccccata ggaaccagcatcctgcaggtgcaggccacagatgcagaccagggcgagaacggcagggtt ttgtacaagatcctctctggaaacagtaaaagtctgtttagcatcaatgagctctcgggg ctcgtgacgcggggccagagggctctggacagagagagcagcagctcccacgtgctagag gtagaggcctacaacagagaccaaggcaggatgaggagctccgtacgggtgatagtgtat gtggaagacgccaacgacgagccaccagtgttcacccaacagcagtacaaccgcctgggc ctaagggagaccgctggcattggcacctctgtcatcgtagtccgagccacagaccccgac accggtgatggcggggcggtggcctatgccctcgtctccgggtccgaccataagttcgat gtggacgtgagcacgggcctggtgaccactgtagactacctagactacgagaccaagacc agctacctgatgaacgtgtcggctactaaccaggcaccgccgttccaccgtggcttctgc acggtctacgtgaccttacttaatgagctggacgaggcagtggcgttcttctcggcgggc tacgaggtgtcactcctagagaacatcgccactggaacggaggtggtgcaggtacaggcg cagtcggcagacaacctcaaccagctgtcgtatcgcttcgacccggacacatcgccagcc gccctcacccttttcaagattgacagtatcacgggtcgtatcacagtcacagggctgctg gacagagagaagggggatatctacaccctgactgtagtggctgacgatgggggaccaaaa aaagactccactgtgaaggtgtcaatcaccatactggatgagaatgacaacagtcccgag tttgatatcacatctgattcgtcggtggagattccagagaacacgcccatcgggaagaga gtggctgtggtgctggggcgcgacaaagatgctgggaataatgcactggtgaacttcagt ctggtggcagggaacatgcaggatgtgtttgagatccggacagtgaaccacaccaatgga gagatctacgtcaactcccctctggaccgagagtctgttgaccgctacctgctcaaggtg cgtgccatggacagcggtgtgcctccccactacagcgacctctctctcattgtcaacatc ctggacgtcaacgacaacacacccatcatcgagagccaggggggctacaacgtcagcatc agtgaaaatgtggggggtggtacgtccgtcctgcgcgtggtggccacagaccatgacatc gggacaaacgccatgctcttctactacatcacctcgggtaaccaggacctcaccttccgt atggaccgcatgacaggtgagatgacaacccgaccatgcccacccgaccgtgagcgccag caggagtaccggctgaccgtgatggtggaggacgacggtacacctccactatcgtcatcg accaccatctacgtgcatatagtggatgaaaatgacaacgcgccagagtttccagaggag gagtatgtgacggtgctgagcgagggccccgacaccttgggggccaccattgccacagta accgccatcgacccagacgagggcctcaacggcaccctccgatacaccatcgaccacggc aacctggccatcaccttctgcatcaatcaaattaccggaaagattgttgcagtgaaggag ctggactttgagatcagcaatggacactacgcacttgtcgtcacagcaacagaccagtgt cccatccatgccctccgcctgacatccagcactacggtgttggtgaatgtcctggatgtg aacgatgtgacccccaccttccccaaggtctatgaggggccctttaagataacagagggc cagccgggaccccgggtctggaccctcaaagccactgaccaagactctggactcaacggc aaagtggagtacagcatcactgccggagacccccagaatgagtttgtgatatccccagtg gagggagagctgcgtgtgaggagagatgtggagctggacagagagaccacacccttctac aacatcactgtcatggcaaaagacctgggcaaaccaccacgcagcagcatggtggtggtg ggtgtccatgttctggacatcaatgacaatgaccccgtgctgctcaacctgccccataac accagtgtgagcgagggggcgtccgtatacacctcggtggccagggtcagagcgcaggat gtagacagtggacgcaacgccctactcacctacaacatcactgctggaaaccgctacggc gccttctacatcaacgacactacaggggtggtgcaggtgaacaggcctctggacagagag agggtggcggagtacagactggccattacagtcaaagacaaccctgaaaactcccgcatc gctcgccgggactcagaactgctggtgatcacagttttggatgagaatgacaacaggccc atattcacacagaccagctaccgggctgagatcactgagaactcccccacaggcagtgct gtgtcaatgttgaacggaccagtgttggctgaggacaaagacattgggcccaacgctgtg gtcaggtaccatctgctgggaacaagacaggacctcttcactgtggactctgatacaggt gtggtgcgtgtgcgacaggcagcgctgttggaccgcgagatgtttgtggagcctcgggtg gagctgttcctggtgggggaggatgtgtgggggctcaacagcagtgtacccctcactgtg acaatcttggatcagaacgacaaccctcctgtcttcaacccccccagcctaactgtgcac cttcctgagaacagccccactggtgtggtggtgacccagctgtctgctagtgacgctgat tcaggctctaacgcctggctgctctaccggctggaaagtggcgcgcaggaccgcttcata gttgactccctgtccggcgccattctggtgggcaacgccatcctcgaccgtgaggagcga ggctcctaccgcctggtcatcttggctacagaccgtggcacgccctctttgtcgggcact gccaccctgtcggtcatcctggatgatgtcaacgactcacgaccgcgtttcattgaaccc gtgacgactatcaatgtaaacgagtctacgccgccaggcgtggtggtggctacgctcgcc gccgaagatcatgacctacgaccccggctggaatattacatcatctctgtggaggccaag gatgatgggaataaccctgtagatgggctgcaagagtctttcggcatcgatttccacacg ggtgctgtgtttgtgcataacccactcaacagagagctggtggccacatttgagatcctt gtgtcggtgcatgacaacgccagtgatgtcatcgacatgtcagtcagcgtacctaatgcg agactgacagtgaacgtgctggatgtgaatgacaatgccccgcggttcagaccctttgga gtggccaacttctcagagaagattctggaaggggctcagccaggcaccactctgctgtcg gtgtcagccgtggacccagacaaaggccctaatggacaggtcatctaccagctgctacac ctgccccgaggggactacctcagactggaggacccctctactggtaagatcgtagccaac cggactgtggactttgagcaggtgcagtggctgaacttcacagtgagagctcaggaccac ggcagtccacccagagtggctgagcttcctgtctacctacgtatagtagacatcaatgat aacaagcccatctttacacaaccctcttaccagaagccagtgtttgaggatgttgacttg ggcacggtcatagtgacagtcagtgccacagacgcagattcgggcctcttctctgtcatc gagtacggcctggtagacggagagggcaagtttggcatcactccctccactggtgacatc tacattctgtctccactggacagagagactaaagaccactacaccctgacggccatagct agggacaaccctgggggcagccccaacaaccgacgggagaaatctgttcaggtcttggtg accgttctggatgtgaatgacttccgtccacggttctcagatcaggtctttgagaccagt gtgtttgagaacgagcccagtgggacatctgtgatcacgctgactgccaatgacctggat gagggggagaacggtctgctgtactacagcctgcagggcccaggggcagatgccttctct ctggacgctgacacaggcctggtgcgttctctccgtctgctgcagtcctttgagtgcttt aacctgacggtggtggctacagaccagggcaaaccacccctctggggcaccgccacctta cacatcatcatcatagatgtcaacgacaacaggcccatgttcgtcaggcccaccaacggc accatcatgcatatcatggaggagcaggccccaggcctgctggtgtatgaggtgtttgcg acagatggggatgagggggtgaatggagaggtgcgctatgcattcctccagacaggcgct aggaacagagattgggagaacttccacattgacactattacaggagttatcaccaccgcc gtcaaactggaccgagagaagcaggccctgcacagcctgattgttgtggcctatgaccta ggtcagcccgtgccttatgagacaacccagcccctacaggtggcgctgttggacatcgat gacaacgagcctgtcttcttcaagcccccgcgaggcagcctaccgtaccagactctgtct gtggcagagcactctactccagggacagtagtgggtaatgtgaaaggagctgtggacgca gacgaaggctcaaacgctgtagtctactacttcatagcagggggagatactgaggggaac tttggcctgaacccagggggcatactgaaggtgaagaaagatctggatcgtgaggacatc tcagtatattccatcatcgtcaaggcctccagccacaggaattgggtcccacccagggat cagaggtcagcccggggtagatcccttgaccccagccaagaccccaccctgcaggagatc agaatctgcctggaggacatcaacgaccagccaccgcgcttcaccaagctggagtacact gcaggtgtggcagctgatgccaaggtgggctcagatctgatccgggtacaggccatagac aacgacatagggaacaacagcctggtgttgtaccatgtcctgtccattcgctacattaaa ctccagtccaatgactctgaggacataggaaatgtcttcatcataggagagacagatggg atcatccgcacctttgacctgttcacggcctacgacccgggctacttcatggtggaggta ttggcacgggacctggcgggccacagtgacatcaccatggtggacatctacatcctgcgg gacaaccagcgggtgaagatcatcatcaacgagataccagagcgggttcaacagttccag gaggagtttattagcctgctatccaacatcaccagagccatagtcaacacggacgatatg cagttccacgtggacaagaaaggcagagtgaattttgcccagacagacgtgctcatacat gtggtcaacaagcagaccaaccgcatcctggacgtggaaaaggtgattcagatgattgat gagaacaaggaccagctgaggaacctgttcaggaattacaacatcctggacgtccagcct gccatcagcaggagagcacctgatgacctcacaacgctacagatggccatcattatccta gctgtgttgctcttcttggcagccatgttgttcatctttacgaactggtactatcgcaca gtacacaagaggaagctgaaagccattgtagcaggatccacaggaaaccaaggtctaatg gacatcctggatatgcccaacaccaatatatactcatttgagggggccaaccctgtttgg ctggacccgttctgtcgaaacctggagctagctgcccaggcagataatgaagaagacctg ccagtgaacctcagtgagatcactgacctgtggaacagccctgctcggactcacggaacg tttggccgcgagccccaggccaagcctgaggatgaccgctacctgagggcagccatccag gagtacgacaatgtcgccaagctgggccagatcatgagggaggggcccattaagctgatc cagagtgacctggatgatgacgaggatgaccgtgtgggcatgggtgacagctggggcacg ctgcgcttcagacacaagctccccgttgagatgagggggcccgacggcgtccacagcagc acgggtacactcctaacctctgacctcaacagcctgcccgaggacgaccagcgggccctg gcaggctccacagaggcactgaacatcattgatggcgggttgtacgccgagcgcaacacc cgtaccgagtcagccaagtccacaccgctgcaccgtaacaaggatactgacatgctgacc gagagcccgctggagatcacagagttatga

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