Oncorhynchus mykiss (rainbow trout): 110538547
Help
Entry
110538547 CDS
T07259
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
omy03016
]
110538547 (tsen54)
Transfer RNA biogenesis [BR:
omy03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
110538547 (tsen54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
110538547
NCBI-ProteinID:
XP_021481108
Ensembl:
ENSOMYG00000003674
LinkDB
All DBs
Position
12:79428899..79434216
Genome browser
AA seq
522 aa
AA seq
DB search
MADQNKTSAEVEFGNELLNPSELFEARTRSHKIPVRGQKDFIPTGSDQQRDRLQQSLDEH
WNLVSEERVERLGNLVKAVWIPSDMIVELQSPAGKFWQTMGFSAHGKQCLHPEEALYLME
CGNLQVFYQDLPLSIQEGYERFLYSKTMSVQHYQVFGHLKRLGYVVNRFDPSSVPSQYER
QLNLPQSRDRSGRLPKRKRSHSPTSRHTGTQEGPTSKRMEEEKDCNREEEDKNPDSLPDL
SAPDIDEIQTASHVDPTTSTEGGQGRSWWSKEGSPDPDSELPGQPQSSPRWDFSSIPFPD
LGSRSWLPSSLTSPDPCLLPGAVGSVGACDVAPWLQRLNLREVRMSRRECERERDRDRYR
RDINQDREVRRCRNWAEYQELQGRRIQRNRRDRPTHLWEGPVTPLHDPAQVTSTGELLDK
ISVIKSTRLLEGASSLKGSEEWRICFNIYQPDTVAEFKKSAPGKPYSRMCVCSFDGPVPD
LWTLKLLAFQSGDVPVTYAVVDHGDISFYSFKDFQIPTDTSF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggctgaccaaaacaaaacatcagctgaagtagaattcggcaatgaattactaaaccca
tctgagctgttcgaagcccgcacgcgcagccacaagatcccggtgcgcgggcagaaggat
ttcattcccactgggtcggatcagcaaagggataggcttcagcagagtttggacgagcac
tggaatctagtatctgaggagcgagtggagaggttggggaacctggtgaaggcagtgtgg
attcccagtgacatgatagtggagctacagtcaccagcagggaagttttggcagactatg
gggttttctgcccatggtaagcaatgtctacatccagaagaggctctctatctaatggag
tgtggaaacctgcaagtgttctaccaagacctgccactgtccatccaagagggctatgag
agatttctatactcgaagacaatgagtgtacagcattaccaggtttttggccatttgaaa
cgacttggctatgtggtgaacagatttgatcccagttctgtgccatcgcagtatgagagg
cagttgaacctgccccagtcccgagacagatcaggaagacttccgaagaggaaacgcagc
cacagccccacctccaggcacacaggaacacaggagggccccacttctaagagaatggag
gaggagaaagactgcaacagagaggaagaggacaagaatcctgactctcttccagatctt
tcagccccagacattgacgaaatccaaacagcatcacacgttgaccccaccacttcaacc
gagggtggccagggcaggagctggtggtcaaaggaaggctccccagaccctgactctgag
ctgccaggtcagccccagagctcccctcgctgggactttagctccatccccttcccagac
ctgggctccagaagctggctccccagcagtctgacctccccagacccctgcctgctgccc
ggcgctgtggggtcagtgggggcctgcgatgtggccccctggctgcagaggctcaacctg
cgggaggtgaggatgtcccggcgtgagtgtgagagggagcgggacagggaccggtaccgg
agggacatcaaccaggacagagaggtacgacgttgcaggaactgggcggagtaccaggag
ctacaggggagaaggattcaacggaaccgcagagataggccaacacacctgtgggagggg
ccggtcacacccctacatgaccctgcacaggtcacttcaactggtgagctgctggacaaa
atcagtgtgatcaaatccacacggctgctggagggagcatccagtttgaaaggttcagag
gagtggagaatctgtttcaacatttaccaacccgacacggtcgctgaattcaagaagagc
gctcctggaaaaccctattcccgcatgtgtgtgtgcagtttcgatggtccagtgcctgac
ttgtggacactgaaattgctggctttccagagtggggacgtcccggtcacctatgcagtg
gtggaccacggggacatctccttctactccttcaaggacttccagatacccacagacacg
tccttctga
DBGET
integrated database retrieval system
