Oncorhynchus nerka (sockeye salmon): 115107209 Help Entry 115107209         CDS       T07952                                  Name (RefSeq) cadherin-23-like   KO K06813   cadherin 23 Organism one  Oncorhynchus nerka (sockeye salmon) Brite KEGG Orthology (KO) [BR:one00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:one03037]     115107209    04515 Cell adhesion molecules [BR:one04515]     115107209 Cilium and associated proteins [BR:one03037]  Primary cilia and associated proteins   USH complex and associated proteins    115107209 Cell adhesion molecules [BR:one04515]  Cadherins   Major cadherins    115107209 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_3 Bact_surface_Ig-like Sde0182_C Motif Other DBs NCBI-GeneID:  115107209 NCBI-ProteinID:  XP_029486497 EnsemblRapid:  ENSONEG00000009915 LinkDB All DBs Position LG23:complement(21906934..22477506) Genome browser AA seq 3307 aa AA seqDB search MSWSVGFGGRMTVAKLLLSFFILNSFCEASNQPPRFQNYFFHSYLLIYENTPVGTSVTQL QAGDPDQEPLIFGVVGEEAMRYFAVERDSGVVWLRQPLDRETKSEMQVEFFVSDSQGVVK DTVNIQIGDVNDNSPTFHGQPYTVHIAENTPVGTSVYQVNATDPDQGTGGSVLFSFQPPS SFFSIDGARGTVTVTRALDYETTSAYQLTVNATDQDKTRPLSSLSNLAITITDVQDMDPI FTNLPYSTNIGEDVPPGYEVRKIRAIDQDLGRPRGIGYTIISGNTNSIFALAYISGSLTV NGQLDRENPLYSSGFTLTVKGTELNDDRTPTDASVMTNFTILLIDKNDNAPKFNSSEYRV RITELAQVGFALPLFIQAEDKDEGVNSMFQVFLTGNNSDHFTISPTAVQGRADIRVRVDV PLDYENIQRYSFSLYANESMSEHVGFARIFIDLINENDNRPIFLKSLYNISLPENTPRGT SLLRIQAIDGDFGTFGTVRYYFSDEPEQFSLDPETGWVHLWGNLDYELMRRFTLTVLARD GGGEETTGRLWVNVLDVNDNTPLFQKEAYMGSLRENEQAAQQVARVRATDEDSPPNNFLT YTLTSVSAFRGYFRITMVEGYAVISVNSPLDYEMVPEGMIYLTVMAKDGGNPSLNSSVSV TVELFDENDNPPKFSKPSYLVKIPENIIAGATVVFVNATDLDASREFGQASLIYSLQGSS QFRLNTRSGEITTTALLDRELKSEYILIVRAVDGGVGPLQKTGIATVNITILDINDNSPM WRDEPYHANVVEMSPIDTDVISVIGRPPLRSSVSTTVYVNLLDLNDNDPIFLNLPFVAEV PEGLPSGSSVFKIQVEDPDQEENGMVTMGLLVGMPRVDFYLNTTTGVLYSTATLDREQIS LYHLRIVAYDQGQNPRTSTSTLTITVLDANDETPTFFPKVYNVSLQESVPRDHVVARLTC SDNDAGLNAELSYFITGGNQDGKFSVGFRDGVVRTVVGLDRETQATYSLVIEAIDNGPAG SRRTGTATVFVEVLDVNDNRPIFLQNSYETSILENVPIGSSILQVQATDSDQGENGRVLY RILSDNSKGLFRINELSGLVMRGQRALDRESSSSHVLEVEAYNSDQGRMRSSVRVIVYVE DANDEAPVFTQQQYNRLGLRETAGIGTSVIVVRATDPDTGDGGAVAYALDSGSDRKFDVD VSTGLVTTVDYLDYETKTSYLMNVSATDQAPPFHRGFCMVYVTLLNELDEAVAFFSAGYE VSLLENIATGTEVVQVQAQSADNLNQLSYRFDPDTSPAALALFKVDSITGRITVTGLLDR EKGDLYTLTVVADDGGPNKDSTVVSITIQDENDNSPEFDITSDSLVEIPENTPIGKRVAV VLGRDKDAGKNGLVYFRLVAGNMQDVFEIRTVNHTYGEIYVNSPLDRESVDRYLLKVRAM DSGVPPRYRDLPLIINILDVNDNTPIIERQVGYNVSISENVGGGTSVLRVVATDRDIGPN AMLFYYITSGNNDLTFRMDRMTGEMVTRPSPPDRERQQEYRLIMMVEDDGAPSLSSSTTI YVRIVDENDNAPEFPEEEYVTVLSEGPNTVGAIIATVTAIDPDEGLNGTLRYAINHGNLD ITFHINHTTGRIVAVKELDFEISNGHYALIVTATDQCPIHALRLTSSTTVLVNVLDVNDV TPTFTKPYEGPFEITEGQPGPRVWTLKAIDQDSGLNGKVEYSITAGDPQNEFVVSPVEGE LRVRRDVELDRETTPFYNITVMAKDLGNPPRISIVVVGVHVLDINDNDPILLNLPHNTSV REGASIHTLVTTVQARDMDSGRNALLTYNITAGNHDGAFYINDTTGMVQVNRPLDRERVG EYRLTITVKDNPENPRIARRDSDMLVITVLDDNDNRPIFTQTSYRAEITENSPSGSAVSV LNGPVLAEDKDIGPNAVVRYRLLGTRLDLFTVDSDTGVVRVRQKALLDREAFVEPRVELL LVGEDVGGLNSSVPLTVTIMDQNDNPPVFNPPSLTVHLPENSPTGVVVTQLSASDADSGS NAWLLYRLESGAQDRFVVDSLSGAVLVGNSTLDREERGSYRLVVVATDRGTPSLSGTATL SVILDDVNDSRPRFLEPVTTININESTPPGVVVATLTAKDPDLRPRLEYYIISVEAKDDG NNPVGGLQESFGIDFHTGAVFVRNPLNRELVATFEILVSVHDNASDVIDMSVSVPNARLI VNVLDVNDNAPRFRPFGVANFSEKILEGAQPGTTLLSVSAVDPDKGPNGQVIYQLLHLPR GDYLRLEDPSTGKIVAYRTVDFEQVQWLNFTVRAQDHGSPPKVAELPVYLRIVDVNDNNP IFTQPSYQKPVFEDVDLGTVIVRVRATDADSGLFSVIEYSLVDGEGKFGITPSTGDIYIL SPLDRETKDHFTLTAIARDNPGGSPNNRRENSVQVLVTVLDVNDFRPRFSERAFETSVFE NEPSGTSVITLTATDLDEGQNGLLSYSMQGPGADAFSLDADTGLVRSLRLLQSFEHFNLT VVATDQGRPPLWGTATLHIIIIDVNDNRPMFVRPTNGTIMHIMEEQPPGLLVYEVFATDG DEGVNGEVRYAFLQTGAGNRDWDNFHIDAITGVITTAIKLDREKQALHSLIVVAYDLGQP VPYETTQPLQVALLDIDDNEPVFFKPPRGSLPYQTLSVAEHSTPGTVVGNVTGAVDADEG SNAVVYFFIAGGDTEGNFGLSPGGVLKVKKDLDREDISVYSIIIKASSHRNWAPARGQTS AWGRALDPSRDPTLQEVRIYLEDINDQPPRFTKLEYTTGVAADAKVGSDLIRVQAIDNDV GNNSLVLYHVLSIRYIKLQSNDTEDIGNSFIIGETDGIIRTYDLFTAYDPGYFVVEVLAR DLAGHSDIAMVGIYILRDDQRVKIVINEIPERVRQFQEEFINLLSNITGAIVNTDDVQFH VDKKGRVNFAQTDVLIHVVNKHTNRILDVEKVIQMIDENKEQLKNLFRNYNILDVQPAVS GRAPDDLTTLQMAIIILAVLLFLAAMSFIFMNWYYRTVHKRKLKAIVAGSTGKQGLMDIL DLPNTNKYSFEGANPVWLDPFCRNLELAAQAEHEDDLPENLSEITDLWNSPVPTHGTFGR KPQAKPEDDRYLRAAIQEYDNIAKLGQIMREGPVKGTLLNVVLDDYLRLKKLFAARLVTK STIQGDQSSVTELIQSDLDDDEDERVGMGGSWGTLRFKHKLPMEMRGPDGVHVVHGSMGT LLTSDLNSLSEDNQLALARSMEALNATDRGLYTERNARTESAKSTPLHHNNKVDDTLSQS PLEITEL NT seq 9924 nt NT seq  +upstreamnt  +downstreamnt atgtcgtggagtgtgggtttcggtggcaggatgacggtggccaagcttctcctatccttc ttcatcctaaactccttttgcgaagcctccaaccagcctccacgcttccagaactacttt ttccactcctatcttctcatctacgagaacacaccagtcggcacatcagtaacccagctg caggcgggagacccagaccaggagcccctcattttcggggtagtgggagaggaggccatg aggtactttgcagtggagagagacagtggagtagtgtggctacgacagcccttggaccgc gagaccaagtcagagatgcaggtggagttctttgtgagtgacagccaaggggtggtcaaa gacacagtgaatattcagataggagatgtgaatgacaactcccctactttccatggccag ccatacacagtacacattgcagagaacactccagtgggcacctcagtctaccaggtgaat gccacagacccagaccaaggcacggggggcagtgtgctcttctctttccagcccccctct tcctttttctccatcgatggagcccgtggtacagtcactgtcaccagggctctggattat gagacgacatcggcctaccagctcaccgtcaatgccacggaccaggataagactcgccct ctgtccagtctatctaatttagccatcaccatcactgatgttcaggacatggaccccatc tttaccaacctaccctacagcaccaacataggggaggacgtcccaccgggctatgaggtg cgcaagataagagccattgaccaggatctggggagaccgagaggcatcggctacaccatc atctcaggcaacaccaacagcatatttgctctggcctacatcagtggctctttgactgtg aatggacagctggacagagagaaccccctctactcatccggattcactctaaccgtcaag ggcacggagttgaatgatgaccgtaccccgacggatgcctcggtgatgaccaacttcacc atactgctgattgacaagaacgacaacgcgcccaagttcaacagctccgagtaccgagtg cgtatcactgagctggcccaggtgggtttcgccctacccctcttcatccaggctgaggac aaggatgagggagtgaacagtatgtttcaggtgttcctaacggggaacaactcggatcac ttcaccatttcacccacagcggtgcagggccgtgctgacatcagggtgagggtggacgtg cctctggactacgagaacatccaaagatacagcttctctctatatgccaatgagtccatg tcagaacatgtgggttttgcccgtatcttcattgacctgatcaatgagaatgacaaccgg cccatcttccttaaatccctgtataacatcagtctgcctgagaatacacccagaggaacc tccctcctacgcatccaggctatagacggtgactttggcacgtttgggacagtgcggtat tacttcagtgatgagcctgaacagttttcattggaccctgagacaggctgggtgcatctg tggggcaatctggactatgagctgatgcgtcgattcactctgaccgtgctggcccgggac gggggtggagaggagaccacgggcaggctgtgggtcaacgttctggatgtcaatgacaac acaccccttttccagaaggaggcctacatgggctcactgagagagaacgaacaggccgcg caacaggtggcccgagtcagggcaacagatgaggactctccccctaacaacttcctgacc tacaccctcacatcagtgtctgcgttccgtggttacttcagaatcaccatggtggagggc tacgcagtgatcagtgtgaacagccctctggactacgagatggtccctgaaggaatgatc tacctgactgtgatggctaaagacggcgggaacccatcccttaacagcagtgtctctgtc accgttgagctgtttgatgagaatgacaacccgccaaagttcagcaagccgtcctacctc gtcaagatccccgagaacataattgcaggggcgacggttgtgtttgtgaatgccactgat ctggacgcctcccgggagtttggacaggcctcactcatctactccctacagggctcctcc cagttccgcctcaacacacgctcaggagagataaccactacagccttactggacagagag ctgaagtcagagtacatcctgattgtcagagctgtggatggaggggtggggccactgcaa aagactggcattgccacggtgaacatcaccatcctggacataaatgacaattcccccatg tggcgagacgagccctaccacgccaacgtggtggagatgagccccatcgacactgacgtc atctctgtgattggcagacctccactgcgttcctcagtcagcaccacggtgtacgtcaac ttgctggaccttaatgacaatgaccccatcttccttaacctgccctttgtggccgaggtg ccagagggcctgcctagtggatcctctgtgttcaagatccaggtggaggaccctgatcag gaggagaatggtatggttaccatggggctactggtgggcatgccacgcgttgatttttat ctcaacaccaccacaggtgtgctgtactcaacggcaactctggaccgcgagcagattagc ctgtaccacctgaggatcgtggcgtacgaccaagggcagaacccacgcacctccaccagc acccttaccatcacagtcctagatgccaacgacgagacccccaccttcttccccaaggtg tacaacgtgtccctgcaggagagcgtccccagggaccatgtggtggctcgcctcacctgc tccgacaatgacgctggccttaacgccgagctcagctacttcatcacaggtggtaaccag gatggtaaattcagtgttggcttcagagatggtgtggttcggactgtggttggcttggac agagagacacaggctacatactcactggtcatagaggctatcgacaatggtccagcaggc agcaggaggacaggcacagccacagtgtttgtagaagtactggacgtgaacgacaacaga cccatcttcctccagaacagctacgagaccagcatactggagaatgtccccataggatcc agcatcctgcaggtgcaggccacagattcagaccagggggagaacggcagggttctgtac aggatcctctctgacaacagtaagggtctgttcagaattaatgagctgtcggggcttgtg atgcggggccaaagggctctggacagagagagcagcagctcccacgtgctggaggtggaa gcctacaacagtgaccagggcaggatgaggagctccgtacgggtgatagtgtatgtggag gatgccaatgacgaggcaccagtgttcacccagcagcagtacaaccgcctgggtctgagg gagaccgctggcattggcacctctgtcatcgtagtacgagctacagaccccgacactggt gacggcggggcggtggcctacgccctggactccggctctgaccgtaagtttgatgtggat gtgagcacgggcctggtgaccactgtagactacctagactacgagaccaagaccagctac ctgatgaacgtgtcggctaccgaccaggcgccaccgttccaccgtggcttctgcatggtc tatgtgaccttacttaatgagctggacgaggcagtggcgttcttctctgcgggctacgag gtgtcactcctggagaacattgccacaggaacggaggtggtgcaggtgcaggcacagtcg gcggacaacctcaaccagctgtcgtatcgctttgacccggacacatcgccagccgccctt gccctcttcaaggtcgacagtatcacgggccgtatcacagtcacagggttgctggacagg gagaagggggacctctacaccctgactgtagtggctgacgatgggggacccaataaagac tccactgtggtgtcaatcaccatacaggatgagaatgacaacagtccagagtttgatatc acatctgattcattggtggagattccagagaacacacccatcgggaagagagtggctgtg gtgcttgggcgcgacaaagatgccgggaaaaatggactggtgtacttcaggctggtggca gggaacatgcaggatgtgtttgagatccggacagtgaaccacacctatggagagatctac gtcaactcccctctggaccgagagtctgttgaccgctacctgctcaaggtgcgtgctatg gacagcggtgtgcctccccgctacagagacctccctctaatcatcaacatcctggacgtc aatgataacacacccatcattgagagacaggtgggctacaatgtcagtatcagcgagaat gtgggaggcggtacgtccgtcctgcgtgtggtggccacagaccgtgacatcgggcccaac gccatgctcttctactacatcacctcgggtaacaatgatctcaccttccggatggaccgc atgaccggtgagatggtgacacgaccatccccacctgaccgtgagcgccagcaggagtac cggctgatcatgatggtggaggacgacggcgcgccgtcactatcgtcatcgactaccatc tacgtgcgtatagtggatgagaacgacaacgcgccagagtttccagaggaagagtatgtg acggtgctgagcgagggccccaacaccgtgggtgccattattgccacggtaaccgccatc gacccagacgagggcctcaatggcaccctgcgatatgccatcaaccacggaaacctggac atcaccttccacatcaatcacactaccggacggattgttgcagtgaaggagctggacttt gagatcagcaatggacactacgcacttatcgtcacagcaacggaccagtgtcctatccat gccctccgcctgacttccagcaccacggtgttggtgaatgtcctggatgtgaacgatgtg acccccacattcaccaagccctatgaggggccctttgagataacagagggccagccgggg cctcgggtctggaccctcaaggccatcgaccaggactctgggctcaacggcaaagtggag tacagcatcactgccggagacccccagaatgagtttgtggtatctccagtggagggagag ctgcgtgtgagaagagatgtggagctggacagagagaccacacccttctacaacatcact gtcatggccaaagacctgggcaacccaccacgcatcagcattgtggtggtgggtgtccat gtgctggacatcaatgacaacgaccccattctgttgaacctgccccacaacaccagtgtg agagagggggcgtccatccacaccttggtgaccacggtccaagcacgagacatggacagt ggacgcaatgccctgctcacctacaacatcactgccggaaaccacgatggagctttctac atcaatgacactacagggatggtgcaggtgaacaggcctctggacagagaaagggtgggg gagtacagactgaccatcactgttaaagacaaccctgagaatccccgcatcgctcgccgg gactcagacatgctggtgatcacagttctggatgataatgacaacaggcccatattcaca cagaccagctaccgggctgagatcactgagaactccccctcaggcagtgctgtgtcagtg ttgaatggaccagtgttggctgaggacaaagacattgggcccaacgctgtggtcaggtac cgtctgctgggaacaagactggacctcttcactgtggactctgatacaggtgtagttcgt gtgcgacagaaggctctgttggaccgcgaggcgtttgtggagccgcgggtggagctgctc ctggtgggggaggatgtgggaggactcaacagcagcgtgcccctcactgtgacaatcatg gaccagaacgacaaccctcctgtctttaacccccccagcctcactgtgcacctccctgag aacagccccactggtgtggtggtgacccagctgtccgccagtgatgctgattcaggctct aatgcctggctgctttaccggctggagagcggtgcccaggaccgcttcgtagttgactcc ctctctggtgccgtcctggtgggaaactccacccttgaccgcgaggagcgtggctcctac cgcctggttgtcgtggctactgaccgtggcacaccctcattgtcgggcacggctaccctg tcggtcatcctggatgatgtcaacgactcacgaccacgtttcctggaacccgtgacaact attaacataaacgagtctacacctccgggcgtggtggtggcaacgctcaccgcgaaggac cctgacctacgaccccggctggaatattacatcatctctgtggaggcgaaggatgatgga aataaccctgttggtgggctgcaagagtcattcggcatcgatttccacacgggtgctgtg tttgtgcgtaacccactcaacagagagctggtggccacctttgagattcttgtgtcggtg catgacaacgccagtgatgtcattgacatgtcagtcagcgtacctaatgcgagactgata gtgaacgtgctggatgtgaatgacaacgccccgcggttcagaccctttggagtggccaac ttctcagagaagattctggaaggtgctcagccaggcaccactctgctgtccgtgtcagct gtggacccagacaaaggccctaacggacaggtcatctaccagctgctacaccttcccaga ggggactacctcagactggaggatccatcaactggtaagatcgtagcctaccggacggtg gactttgagcaggtgcagtggctgaacttcacagtgagagcccaggaccacggcagtcca cccaaagtggctgagcttcctgtctacctgcgtatagtagatgtcaatgataacaaccct atctttacacaaccctcttaccagaagccagtgtttgaggatgttgacttgggcacggtc atagtgagagtcagagccacagatgcagactctggcctcttctctgtcatcgagtacagc ctagtagatggagagggcaagtttggcatcactccctccactggtgacatctacattctg tctccactggacagagagactaaagaccacttcaccctgacagccatcgctagggacaac cctggcggcagccccaacaaccgacgagagaactctgttcaggtcttggtgaccgttctg gatgtgaatgacttccgtccgcgtttctcagagcgggcctttgagaccagtgtatttgag aacgagcccagtgggacgtctgtgatcacgctgactgccactgacttggacgaagggcag aacggcctgctctcttacagcatgcagggcccgggggcagatgccttctctctggatgct gacacaggtctggtgcgttctctccgtctgctgcagtcctttgagcactttaacttgacg gtggtggctacagaccagggaagaccacccctctggggcaccgccaccttacacatcatc atcatagacgtcaacgacaacaggcccatgttcgtcaggcccaccaacggcaccatcatg cacatcatggaggagcagcccccaggcctgctggtgtatgaggtgtttgcgacagatggg gatgaaggggtgaatggagaggtgcgctatgccttcctccagacaggagctgggaacaga gactgggataacttccacattgatgctattacaggagtcatcaccaccgccatcaaactg gaccgagagaagcaagccctgcacagtctgattgttgtggcctatgacctgggtcagccc gtgccttatgagaccacccagcccttacaggttgcgctgttggacattgatgacaacgag cctgtcttctttaagcccccgcgaggcagcctgccgtaccagactctgtctgtggcagag cactctactccagggacagtagtgggtaacgtgacaggagctgtggacgcagatgaaggc tcaaacgctgtagtctacttcttcatagcagggggagatactgaaggtaactttggcctg agcccagggggcgtactgaaggtgaagaaggatctggatcgtgaggacatctcagtgtac tccatcatcatcaaggcctccagccacaggaactgggcccctgcacggggtcaaacgtca gcctggggaagagcacttgaccccagccgtgacccaaccctgcaggaggtcagaatctac ctggaggacatcaacgaccagccaccacgcttcaccaagctagagtacactacaggtgtg gctgctgatgccaaggtaggctcagatctgattcgggtacaggccatagacaacgatgta gggaacaacagtctggtgctgtaccatgtcctgtccatccgctacattaaactccagtcc aatgacactgaggacataggaaacagcttcatcataggagagacagatgggatcatccgt acctatgacctgttcacggcttacgacccgggctacttcgtggtggaggtgttggcacgg gacctggcgggccacagtgacatcgccatggtgggcatctacatcctgcgggacgaccag cgggtgaagatcgtcatcaacgagataccagagcgggtacgacagttccaggaggagttt atcaacctgctgtccaacatcaccggagccattgtcaacacggacgatgtgcagttccac gtggacaagaagggcagagtgaactttgcccagacagatgtgctcatacacgtggtcaac aagcacaccaaccgcatcctggatgtggaaaaggtgattcagatgattgatgagaacaag gaacagctgaagaaccttttcaggaattacaacatcctggatgtccagcctgccgtcagc gggagagcacctgatgacctcactacgctacagatggccatcattatcttagctgtgttg ctcttcttggcagccatgtcattcatcttcatgaactggtactatcgcacagtacacaag aggaagctgaaagccattgtagcaggatccacagggaagcaaggtctcatggacatcctg gatttgcccaacaccaataaatactcatttgagggggcgaaccctgtgtggctagacccg ttctgtcggaacctggagctagctgcccaggcagagcatgaagacgacctgccggaaaac ctcagtgagatcactgacctgtggaacagccccgtgcctactcacggaacatttggccgc aagcctcaggccaagcctgaggatgaccgttacctgagagcagccatccaggagtatgac aacatcgccaagctgggccagatcatgagagaggggcccgttaagggcacattgctcaat gtggttctggacgactacctgaggctcaaaaagctctttgcagccagactggtcaccaag tcgaccatccaaggcgaccaatcgtcagtcacagagctgatccagagtgacctggatgat gacgaggatgagcgagtgggcatgggtggcagctggggtacgctgcgcttcaaacacaag ctccccatggagatgaggggacccgacggcgtgcacgttgttcacggcagcatgggcacg ctcctgacctctgacctcaacagtctgtctgaggacaaccagctggccctggcgcgctcc atggaggcgcttaacgccaccgacagggggctgtacaccgagcgcaatgcccgtactgag tcggccaagtccacgccgctgcaccacaacaacaaggtcgatgatacactgtcccagagc ccgctggagatcacggagttatga

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